RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 SLC20A1Q8WUM9 679 aa24.33■■□□□ 1.49
RHBDF1-208ENST00000482904 RRN3Q9NYV6 651 aa24.33■■□□□ 1.49
RHBDF1-208ENST00000482904 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.33■■□□□ 1.49
RHBDF1-208ENST00000482904 RALGAPA1Q6GYQ0 2036 aa24.33■■□□□ 1.49
RHBDF1-208ENST00000482904 PATE3B3GLJ2 98 aa24.32■■□□□ 1.48
RHBDF1-208ENST00000482904 ZNF18P17022 549 aa24.32■■□□□ 1.48
RHBDF1-208ENST00000482904 KCNA4P22459 653 aa24.32■■□□□ 1.48
RHBDF1-208ENST00000482904 CSKP41240 450 aa24.32■■□□□ 1.48
RHBDF1-208ENST00000482904 GABRB2P47870 512 aa24.32■■□□□ 1.48
RHBDF1-208ENST00000482904 LIMK1P53667 647 aa24.32■■□□□ 1.48
RHBDF1-208ENST00000482904 JAM2P57087 298 aa24.32■■□□□ 1.48
RHBDF1-208ENST00000482904 NOMO3P69849 1222 aa24.32■■□□□ 1.48
RHBDF1-208ENST00000482904 EIF4EBP2Q13542 120 aaPredicted RBP24.32■■□□□ 1.48
RHBDF1-208ENST00000482904 NCAPHQ15003 741 aa24.32■■□□□ 1.48
RHBDF1-208ENST00000482904 PTPRNQ16849 979 aa24.32■■□□□ 1.48
RHBDF1-208ENST00000482904 C2CD6Q53TS8 623 aa24.32■■□□□ 1.48
RHBDF1-208ENST00000482904 SND1Q7KZF4 910 aaKnown RBP eCLIP24.32■■□□□ 1.48
RHBDF1-208ENST00000482904 XYLT1Q86Y38 959 aa24.32■■□□□ 1.48
RHBDF1-208ENST00000482904 SYT12Q8IV01 421 aa24.32■■□□□ 1.48
RHBDF1-208ENST00000482904 CPA5Q8WXQ8 436 aa24.32■■□□□ 1.48
RHBDF1-208ENST00000482904 HSPA12BQ96MM6 686 aa24.32■■□□□ 1.48
RHBDF1-208ENST00000482904 RPRD1AQ96P16 312 aaPredicted RBP24.32■■□□□ 1.48
RHBDF1-208ENST00000482904 TMEM245Q9H330 911 aa24.32■■□□□ 1.48
RHBDF1-208ENST00000482904 NOCTQ9UK39 431 aaKnown RBP24.32■■□□□ 1.48
RHBDF1-208ENST00000482904 ASLP04424 464 aa24.31■■□□□ 1.48
RHBDF1-208ENST00000482904 ITPKAP23677 461 aa24.31■■□□□ 1.48
RHBDF1-208ENST00000482904 CD6P30203 668 aa24.31■■□□□ 1.48
RHBDF1-208ENST00000482904 SCNN1AP37088 669 aa24.31■■□□□ 1.48
RHBDF1-208ENST00000482904 COPAP53621 1224 aa24.31■■□□□ 1.48
RHBDF1-208ENST00000482904 CDR2Q01850 454 aa24.31■■□□□ 1.48
RHBDF1-208ENST00000482904 ZNF33AQ06730 810 aa24.31■■□□□ 1.48
RHBDF1-208ENST00000482904 TRIM61Q5EBN2 209 aa24.31■■□□□ 1.48
RHBDF1-208ENST00000482904 PITRM1Q5JRX3 1037 aa24.31■■□□□ 1.48
RHBDF1-208ENST00000482904 STPG1Q5TH74 334 aa24.31■■□□□ 1.48
RHBDF1-208ENST00000482904 MMS22LQ6ZRQ5 1243 aa24.31■■□□□ 1.48
RHBDF1-208ENST00000482904 CIR1Q86X95 450 aaPredicted RBP24.31■■□□□ 1.48
RHBDF1-208ENST00000482904 OR2T3Q8NH03 318 aa24.31■■□□□ 1.48
RHBDF1-208ENST00000482904 KIAA1522Q9P206 1035 aaPredicted RBP24.31■■□□□ 1.48
RHBDF1-208ENST00000482904 PLXND1Q9Y4D7 1925 aa24.31■■□□□ 1.48
RHBDF1-208ENST00000482904 THADAQ6YHU6 1953 aa24.31■■□□□ 1.48
RHBDF1-208ENST00000482904 MUC22E2RYF6 1773 aaPredicted RBP24.3■■□□□ 1.48
RHBDF1-208ENST00000482904 LNP1A1A4G5 178 aa24.3■■□□□ 1.48
RHBDF1-208ENST00000482904 CAMK2GQ13555 558 aaPredicted RBP24.3■■□□□ 1.48
RHBDF1-208ENST00000482904 FSCBQ5H9T9 825 aa24.3■■□□□ 1.48
RHBDF1-208ENST00000482904 RNF219Q5W0B1 726 aaPredicted RBP24.3■■□□□ 1.48
RHBDF1-208ENST00000482904 METTL3Q86U44 580 aaKnown RBP24.3■■□□□ 1.48
RHBDF1-208ENST00000482904 TOE1Q96GM8 510 aaKnown RBP24.3■■□□□ 1.48
RHBDF1-208ENST00000482904 PRMT1Q99873 361 aaKnown RBP24.3■■□□□ 1.48
RHBDF1-208ENST00000482904 NUSAP1Q9BXS6 441 aaKnown RBP24.3■■□□□ 1.48
RHBDF1-208ENST00000482904 FBRSQ9HAH7 460 aa24.3■■□□□ 1.48
RHBDF1-208ENST00000482904 PIGVQ9NUD9 493 aa24.3■■□□□ 1.48
RHBDF1-208ENST00000482904 USP36Q9P275 1121 aaKnown RBP24.3■■□□□ 1.48
RHBDF1-208ENST00000482904 PAXBP1Q9Y5B6 917 aa24.3■■□□□ 1.48
RHBDF1-208ENST00000482904 A0A1B0GVM2 712 aa24.29■■□□□ 1.48
RHBDF1-208ENST00000482904 TCAF2A6NFQ2 919 aa24.29■■□□□ 1.48
RHBDF1-208ENST00000482904 CFIP05156 583 aa24.29■■□□□ 1.48
RHBDF1-208ENST00000482904 ATP1A3P13637 1013 aa24.29■■□□□ 1.48
RHBDF1-208ENST00000482904 HOXD12P35452 270 aa24.29■■□□□ 1.48
RHBDF1-208ENST00000482904 GGCXP38435 758 aa24.29■■□□□ 1.48
RHBDF1-208ENST00000482904 TPMTP51580 245 aa24.29■■□□□ 1.48
RHBDF1-208ENST00000482904 CENPCQ03188 943 aa24.29■■□□□ 1.48
RHBDF1-208ENST00000482904 DEUP1Q05D60 604 aa24.29■■□□□ 1.48
RHBDF1-208ENST00000482904 OTUD1Q5VV17 481 aaPredicted RBP24.29■■□□□ 1.48
RHBDF1-208ENST00000482904 RGL4Q8IZJ4 473 aa24.29■■□□□ 1.48
RHBDF1-208ENST00000482904 CCAR2Q8N163 923 aaKnown RBP24.29■■□□□ 1.48
RHBDF1-208ENST00000482904 TTC17Q96AE7 1141 aa24.29■■□□□ 1.48
RHBDF1-208ENST00000482904 LMLNQ96KR4 655 aa24.29■■□□□ 1.48
RHBDF1-208ENST00000482904 NPY6RQ99463 290 aa24.29■■□□□ 1.48
RHBDF1-208ENST00000482904 SUN2Q9UH99 717 aa24.29■■□□□ 1.48
RHBDF1-208ENST00000482904 INTS6Q9UL03 887 aaKnown RBP24.29■■□□□ 1.48
RHBDF1-208ENST00000482904 VANGL2Q9ULK5 521 aa24.29■■□□□ 1.48
RHBDF1-208ENST00000482904 ABCA7Q8IZY2 2146 aa24.29■■□□□ 1.48
RHBDF1-208ENST00000482904 MEI4A8MW99 385 aa24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 PAGE1O75459 146 aa24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 OXTRP30559 389 aa24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 FMO1Q01740 532 aa24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 AUHQ13825 339 aaKnown RBP24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 PLEKHG6Q3KR16 790 aa24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 SYCP2LQ5T4T6 812 aa24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 FBXL22Q6P050 247 aa24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 TRIM72Q6ZMU5 477 aa24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 RABEPKQ7Z6M1 372 aa24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 SLC41A1Q8IVJ1 513 aa24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 FOXJ1Q92949 421 aa24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 ERGIC2Q96RQ1 377 aa24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 TBCBQ99426 244 aa24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 SIK2Q9H0K1 926 aa24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 HSD3B7Q9H2F3 369 aa24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 WDCPQ9H6R7 721 aa24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 ITM2CQ9NQX7 267 aa24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 TMEM74BQ9NUR3 256 aa24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 SEPT11Q9NVA2 429 aaKnown RBP24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 EVLQ9UI08 416 aaPredicted RBP24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 PILRBQ9UKJ0 227 aa24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 HS3ST4Q9Y661 456 aa24.28■■□□□ 1.48
RHBDF1-208ENST00000482904 MED19A0JLT2 244 aaPredicted RBP24.27■■□□□ 1.48
RHBDF1-208ENST00000482904 SMTNL1A8MU46 457 aa24.27■■□□□ 1.48
RHBDF1-208ENST00000482904 F9P00740 461 aa24.27■■□□□ 1.48
RHBDF1-208ENST00000482904 PDGFRAP16234 1089 aa24.27■■□□□ 1.48
RHBDF1-208ENST00000482904 TFE3P19532 575 aaPredicted RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms