RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 CDO1Q16878 200 aa18.99■□□□□ 0.63
SMIM4-204ENST00000482728 ARL13BQ3SXY8 428 aa18.99■□□□□ 0.63
SMIM4-204ENST00000482728 CCDC14Q49A88 953 aa18.99■□□□□ 0.63
SMIM4-204ENST00000482728 USP39Q53GS9 565 aaKnown RBP18.99■□□□□ 0.63
SMIM4-204ENST00000482728 ACBD5Q5T8D3 534 aaPredicted RBP18.99■□□□□ 0.63
SMIM4-204ENST00000482728 MBLAC2Q68D91 279 aa18.99■□□□□ 0.63
SMIM4-204ENST00000482728 SPECC1LQ69YQ0 1117 aa18.99■□□□□ 0.63
SMIM4-204ENST00000482728 WDR59Q6PJI9 974 aa18.99■□□□□ 0.63
SMIM4-204ENST00000482728 LRRC31Q6UY01 552 aa18.99■□□□□ 0.63
SMIM4-204ENST00000482728 FAM131BQ86XD5 332 aa18.99■□□□□ 0.63
SMIM4-204ENST00000482728 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.99■□□□□ 0.63
SMIM4-204ENST00000482728 SUMF1Q8NBK3 374 aa18.99■□□□□ 0.63
SMIM4-204ENST00000482728 WFDC5Q8TCV5 224 aa18.99■□□□□ 0.63
SMIM4-204ENST00000482728 HMGB4Q8WW32 186 aa18.99■□□□□ 0.63
SMIM4-204ENST00000482728 GAB3Q8WWW8 586 aa18.99■□□□□ 0.63
SMIM4-204ENST00000482728 SORCS1Q8WY21 1168 aa18.99■□□□□ 0.63
SMIM4-204ENST00000482728 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.99■□□□□ 0.63
SMIM4-204ENST00000482728 TAS2R14Q9NYV8 317 aa18.99■□□□□ 0.63
SMIM4-204ENST00000482728 WASH3PC4AMC7 463 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 RTN2O75298 545 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 ENDOD1O94919 500 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 MOCS3O95396 460 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 GYPCP04921 128 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 SERPING1P05155 500 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 TPM1P09493 284 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 DESP17661 470 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 RRM1P23921 792 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 CASP14P31944 242 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 PTPN9P43378 593 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 ATXN1P54253 815 aaKnown RBP18.98■□□□□ 0.63
SMIM4-204ENST00000482728 LMAN2Q12907 356 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 TSR1Q2NL82 804 aaKnown RBP18.98■□□□□ 0.63
SMIM4-204ENST00000482728 C15orf59Q2T9L4 293 aaPredicted RBP18.98■□□□□ 0.63
SMIM4-204ENST00000482728 TMEM215Q68D42 235 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 SERPINA13PQ6UXR4 307 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 KIAA0907Q7Z7F0 614 aaPredicted RBP18.98■□□□□ 0.63
SMIM4-204ENST00000482728 ADIPOR2Q86V24 386 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 CCAR2Q8N163 923 aaKnown RBP18.98■□□□□ 0.63
SMIM4-204ENST00000482728 C1orf74Q96LT6 269 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 HAPLN3Q96S86 360 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 PPP1R9BQ96SB3 815 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 GABRG3Q99928 467 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 HINFPQ9BQA5 517 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 PARVAQ9NVD7 372 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 SMG5Q9UPR3 1016 aaKnown RBP18.98■□□□□ 0.63
SMIM4-204ENST00000482728 VPS13AQ96RL7 3174 aa18.98■□□□□ 0.63
SMIM4-204ENST00000482728 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.97■□□□□ 0.63
SMIM4-204ENST00000482728 A0A1B0GVM2 712 aa18.97■□□□□ 0.63
SMIM4-204ENST00000482728 TCAF2A6NFQ2 919 aa18.97■□□□□ 0.63
SMIM4-204ENST00000482728 DDX3XO00571 662 aaKnown RBP eCLIP18.97■□□□□ 0.635e-7■■□□□ 14
SMIM4-204ENST00000482728 SYNCRIPO60506 623 aaKnown RBP18.97■□□□□ 0.63
SMIM4-204ENST00000482728 HOXD11P31277 338 aaPredicted RBP18.97■□□□□ 0.63
SMIM4-204ENST00000482728 OXCT1P55809 520 aa18.97■□□□□ 0.63
SMIM4-204ENST00000482728 ZNF177Q13360 481 aaPredicted RBP18.97■□□□□ 0.63
SMIM4-204ENST00000482728 TRIM14Q14142 442 aa18.97■□□□□ 0.63
SMIM4-204ENST00000482728 ZNF234Q14588 700 aa18.97■□□□□ 0.63
SMIM4-204ENST00000482728 LPAL2Q16609 132 aa18.97■□□□□ 0.63
SMIM4-204ENST00000482728 FNDC3BQ53EP0 1204 aaKnown RBP18.97■□□□□ 0.63
SMIM4-204ENST00000482728 FSCBQ5H9T9 825 aa18.97■□□□□ 0.63
SMIM4-204ENST00000482728 STRADAQ7RTN6 431 aa18.97■□□□□ 0.63
SMIM4-204ENST00000482728 C14orf80Q86SX3 495 aa18.97■□□□□ 0.63
SMIM4-204ENST00000482728 RASSF3Q86WH2 238 aa18.97■□□□□ 0.63
SMIM4-204ENST00000482728 MDGA1Q8NFP4 955 aa18.97■□□□□ 0.63
SMIM4-204ENST00000482728 CYB5D2Q8WUJ1 264 aa18.97■□□□□ 0.63
SMIM4-204ENST00000482728 IGSF8Q969P0 613 aa18.97■□□□□ 0.63
SMIM4-204ENST00000482728 MCEEQ96PE7 176 aa18.97■□□□□ 0.63
SMIM4-204ENST00000482728 TPSD1Q9BZJ3 242 aa18.97■□□□□ 0.63
SMIM4-204ENST00000482728 ADAMTS1Q9UHI8 967 aa18.97■□□□□ 0.63
SMIM4-204ENST00000482728 RAD54BQ9Y620 910 aa18.97■□□□□ 0.63
SMIM4-204ENST00000482728 OTOGLQ3ZCN5 2332 aa18.97■□□□□ 0.63
SMIM4-204ENST00000482728 WDR87Q6ZQQ6 2873 aa18.97■□□□□ 0.63
SMIM4-204ENST00000482728 A0A1W2PQF6 199 aa18.96■□□□□ 0.63
SMIM4-204ENST00000482728 DLDP09622 509 aaKnown RBP18.96■□□□□ 0.63
SMIM4-204ENST00000482728 GGCXP38435 758 aa18.96■□□□□ 0.63
SMIM4-204ENST00000482728 IL12RB1P42701 662 aa18.96■□□□□ 0.63
SMIM4-204ENST00000482728 ZNF143P52747 638 aaPredicted RBP18.96■□□□□ 0.63
SMIM4-204ENST00000482728 RPL7AP62424 266 aaKnown RBP18.96■□□□□ 0.63
SMIM4-204ENST00000482728 BYSLQ13895 437 aaKnown RBP18.96■□□□□ 0.63
SMIM4-204ENST00000482728 SH3PXD2AQ5TCZ1 1133 aa18.96■□□□□ 0.63
SMIM4-204ENST00000482728 HGSNATQ68CP4 663 aa18.96■□□□□ 0.63
SMIM4-204ENST00000482728 BNIPLQ7Z465 357 aa18.96■□□□□ 0.63
SMIM4-204ENST00000482728 CIR1Q86X95 450 aaPredicted RBP18.96■□□□□ 0.63
SMIM4-204ENST00000482728 FAM172AQ8WUF8 416 aa18.96■□□□□ 0.63
SMIM4-204ENST00000482728 RUBCNQ92622 972 aa18.96■□□□□ 0.63
SMIM4-204ENST00000482728 CENPIQ92674 756 aaPredicted RBP18.96■□□□□ 0.63
SMIM4-204ENST00000482728 ERLEC1Q96DZ1 483 aa18.96■□□□□ 0.63
SMIM4-204ENST00000482728 ANLNQ9NQW6 1124 aa18.96■□□□□ 0.63
SMIM4-204ENST00000482728 NCDNQ9UBB6 729 aa18.96■□□□□ 0.63
SMIM4-204ENST00000482728 INVSQ9Y283 1065 aa18.96■□□□□ 0.63
SMIM4-204ENST00000482728 SPAG17Q6Q759 2223 aa18.95■□□□□ 0.62
SMIM4-204ENST00000482728 TCRBV5S1A1TA0A578 114 aa18.95■□□□□ 0.62
SMIM4-204ENST00000482728 SRGAP2O75044 1071 aa18.95■□□□□ 0.62
SMIM4-204ENST00000482728 CLDN11O75508 207 aa18.95■□□□□ 0.62
SMIM4-204ENST00000482728 ASLP04424 464 aa18.95■□□□□ 0.62
SMIM4-204ENST00000482728 EPHX1P07099 455 aa18.95■□□□□ 0.62
SMIM4-204ENST00000482728 ADRA1BP35368 520 aa18.95■□□□□ 0.62
SMIM4-204ENST00000482728 CSKP41240 450 aa18.95■□□□□ 0.62
SMIM4-204ENST00000482728 ST8SIA6P61647 398 aa18.95■□□□□ 0.62
SMIM4-204ENST00000482728 MAMLD1Q13495 774 aa18.95■□□□□ 0.62
SMIM4-204ENST00000482728 SLC12A1Q13621 1099 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms