RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 TUBB4AP04350 444 aa20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 RARAP10276 462 aa20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 CTNNA1P35221 906 aaKnown RBP20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 IRAK1P51617 712 aa20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 ZXDAP98168 799 aa20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 MLF2Q15773 248 aaPredicted RBP20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 BOLA3Q53S33 107 aa20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 DNTTIP2Q5QJE6 756 aaKnown RBP20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 C12orf40Q86WS4 652 aa20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 SIX5Q8N196 739 aa20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 KRT35Q92764 455 aa20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 CD101Q93033 1021 aa20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 PSMB7Q99436 277 aa20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 TLR10Q9BXR5 811 aa20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 OSBPL2Q9H1P3 480 aa20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 ARHGEF3Q9NR81 526 aa20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 MARK1Q9P0L2 795 aa20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 BDP1A6H8Y1 2624 aa20.55■□□□□ 0.88
TRAPPC12-220ENST00000482645 GFRA2O00451 464 aa20.54■□□□□ 0.88
TRAPPC12-220ENST00000482645 PSTPIP1O43586 416 aa20.54■□□□□ 0.88
TRAPPC12-220ENST00000482645 LRIG2O94898 1065 aa20.54■□□□□ 0.88
TRAPPC12-220ENST00000482645 PENKP01210 267 aaPredicted RBP20.54■□□□□ 0.88
TRAPPC12-220ENST00000482645 CD72P21854 359 aa20.54■□□□□ 0.88
TRAPPC12-220ENST00000482645 HOXD9P28356 352 aaPredicted RBP20.54■□□□□ 0.88
TRAPPC12-220ENST00000482645 CTHP32929 405 aa20.54■□□□□ 0.88
TRAPPC12-220ENST00000482645 RPS6KA1Q15418 735 aa20.54■□□□□ 0.88
TRAPPC12-220ENST00000482645 ATP13A4Q4VNC1 1196 aa20.54■□□□□ 0.88
TRAPPC12-220ENST00000482645 ACBD5Q5T8D3 534 aaPredicted RBP20.54■□□□□ 0.88
TRAPPC12-220ENST00000482645 RHOT1Q8IXI2 618 aa20.54■□□□□ 0.88
TRAPPC12-220ENST00000482645 CARNMT1Q8N4J0 409 aa20.54■□□□□ 0.88
TRAPPC12-220ENST00000482645 UBL4BQ8N7F7 174 aa20.54■□□□□ 0.88
TRAPPC12-220ENST00000482645 HES6Q96HZ4 224 aa20.54■□□□□ 0.88
TRAPPC12-220ENST00000482645 XPO6Q96QU8 1125 aaKnown RBP20.54■□□□□ 0.88
TRAPPC12-220ENST00000482645 KCTD15Q96SI1 283 aaPredicted RBP20.54■□□□□ 0.88
TRAPPC12-220ENST00000482645 EPAS1Q99814 870 aa20.54■□□□□ 0.88
TRAPPC12-220ENST00000482645 C8orf33Q9H7E9 229 aaPredicted RBP20.54■□□□□ 0.88
TRAPPC12-220ENST00000482645 DNAJC17Q9NVM6 304 aaKnown RBP20.54■□□□□ 0.88
TRAPPC12-220ENST00000482645 MPP6Q9NZW5 540 aa20.54■□□□□ 0.88
TRAPPC12-220ENST00000482645 MIF4GDA9UHW6 222 aaKnown RBP20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 KRT7P08729 469 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 CTNNA2P26232 953 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 SLC6A11P48066 632 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 AMPD2Q01433 879 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 KDSRQ06136 332 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 KRT81Q14533 505 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 GAB4Q2WGN9 574 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 TXNDC11Q6PKC3 985 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 CHFRQ96EP1 664 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 WNT16Q9UBV4 365 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 CLEC4EQ9ULY5 219 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 MIA3Q5JRA6 1907 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 CCDC66A2RUB6 948 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 KRBA1A5PL33 1030 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 H0Y626 953 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 DDX3YO15523 660 aaKnown RBP20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 CNTN5O94779 1100 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 EPHB2P29323 1055 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 L1CAMP32004 1257 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 TPI1P60174 286 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 CDH18Q13634 790 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 ALFQ53S48 1182 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 TTC39BQ5VTQ0 682 aaPredicted RBP20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 TFAP2DQ7Z6R9 452 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 RALGPS2Q86X27 583 aaPredicted RBP20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 PSTKQ8IV42 348 aaKnown RBP20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 MFN1Q8IWA4 741 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 CCDC117Q8IWD4 279 aaPredicted RBP20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 ZNF683Q8IZ20 524 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 TEKT4Q8WW24 435 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 TBC1D31Q96DN5 1066 aa20.53■□□□□ 0.88
TRAPPC12-220ENST00000482645 F5P12259 2224 aa20.52■□□□□ 0.88
TRAPPC12-220ENST00000482645 EEF2KO00418 725 aaKnown RBP20.52■□□□□ 0.87
TRAPPC12-220ENST00000482645 STK25O00506 426 aa20.52■□□□□ 0.87
TRAPPC12-220ENST00000482645 TRIM24O15164 1050 aa20.52■□□□□ 0.87
TRAPPC12-220ENST00000482645 CACNG3O60359 315 aa20.52■□□□□ 0.87
TRAPPC12-220ENST00000482645 TULP3O75386 442 aa20.52■□□□□ 0.87
TRAPPC12-220ENST00000482645 KRT1P04264 644 aa20.52■□□□□ 0.87
TRAPPC12-220ENST00000482645 OPRD1P41143 372 aa20.52■□□□□ 0.87
TRAPPC12-220ENST00000482645 CDH6P55285 790 aa20.52■□□□□ 0.87
TRAPPC12-220ENST00000482645 PON2Q15165 354 aa20.52■□□□□ 0.87
TRAPPC12-220ENST00000482645 ODF2Q5BJF6 829 aa20.52■□□□□ 0.87
TRAPPC12-220ENST00000482645 KCTD6Q8NC69 237 aa20.52■□□□□ 0.87
TRAPPC12-220ENST00000482645 KIF18AQ8NI77 898 aa20.52■□□□□ 0.87
TRAPPC12-220ENST00000482645 ALG3Q92685 438 aa20.52■□□□□ 0.87
TRAPPC12-220ENST00000482645 EDAQ92838 391 aa20.52■□□□□ 0.87
TRAPPC12-220ENST00000482645 ZYG11BQ9C0D3 744 aa20.52■□□□□ 0.87
TRAPPC12-220ENST00000482645 DEC1Q9P2X7 70 aa20.52■□□□□ 0.87
TRAPPC12-220ENST00000482645 PCDHA3Q9Y5H8 950 aa20.52■□□□□ 0.87
TRAPPC12-220ENST00000482645 A0A1B0GVM2 712 aa20.51■□□□□ 0.87
TRAPPC12-220ENST00000482645 TCAF2A6NFQ2 919 aa20.51■□□□□ 0.87
TRAPPC12-220ENST00000482645 KCNK3O14649 394 aa20.51■□□□□ 0.87
TRAPPC12-220ENST00000482645 DAPK3O43293 454 aa20.51■□□□□ 0.87
TRAPPC12-220ENST00000482645 GOT1P17174 413 aa20.51■□□□□ 0.87
TRAPPC12-220ENST00000482645 CXCR5P32302 372 aa20.51■□□□□ 0.87
TRAPPC12-220ENST00000482645 DGKGP49619 791 aa20.51■□□□□ 0.87
TRAPPC12-220ENST00000482645 NUMBP49757 651 aa20.51■□□□□ 0.87
TRAPPC12-220ENST00000482645 NRG1Q02297 640 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC12-220ENST00000482645 DPYSL2Q16555 572 aa20.51■□□□□ 0.87
TRAPPC12-220ENST00000482645 MPP7Q5T2T1 576 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms