RNA–Protein interactions for RNA: ENST00000481978.5

NIFK-206, Transcript of nucleolar protein interacting with the FHA domain of MKI67, human

TSL 2

Gene NIFK, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIFK-206	ENST00000481978	TP63	Q9H3D4	680 aa	Predicted RBP	4.95	□□□□□ -1.62
NIFK-206	ENST00000481978	SFXN1	Q9H9B4	322 aa		4.95	□□□□□ -1.62
NIFK-206	ENST00000481978	FZD3	Q9NPG1	666 aa		4.95	□□□□□ -1.62
NIFK-206	ENST00000481978	ZBTB1	Q9Y2K1	713 aa		4.95	□□□□□ -1.62
NIFK-206	ENST00000481978	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.94	□□□□□ -1.62
NIFK-206	ENST00000481978		A0A1W2PPC1	479 aa		4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	DPPA5	A6NC42	116 aa		4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	PIP5K1B	O14986	540 aa		4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	RPP40	O75818	363 aa	Known RBP	4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	ALDOA	P04075	364 aa	Known RBP	4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	CYP3A7	P24462	503 aa		4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	TKT	P29401	623 aa	Known RBP	4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	FOXL2	P58012	376 aa		4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	TAS2R50	P59544	299 aa		4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	RPL15	P61313	204 aa	Known RBP	4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	PRTG	Q2VWP7	1150 aa		4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	ANKRD40	Q6AI12	368 aa		4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	RINT1	Q6NUQ1	792 aa		4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	CRELD2	Q6UXH1	353 aa	Predicted RBP	4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	TRAPPC11	Q7Z392	1133 aa		4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	DDIAS	Q8IXT1	998 aa		4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	SYTL1	Q8IYJ3	562 aa		4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	RSC1A1	Q92681	617 aa		4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	TMEM41A	Q96HV5	264 aa		4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	CAMK1G	Q96NX5	476 aa		4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	NLRC4	Q9NPP4	1024 aa		4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	UTS2R	Q9UKP6	389 aa		4.94	□□□□□ -1.62
NIFK-206	ENST00000481978	IGKV2D-30	A0A075B6S6	120 aa		4.93	□□□□□ -1.62
NIFK-206	ENST00000481978		M0QYT0	321 aa		4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	SPTLC2	O15270	562 aa		4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	KLRK1	P26718	216 aa		4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	POLD2	P49005	469 aa		4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	HTR6	P50406	440 aa		4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	NANOS2	P60321	138 aa	Known RBP	4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	TRIM60	Q495X7	471 aa		4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	TTC39A	Q5SRH9	613 aa		4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	C6orf10	Q5SRN2	563 aa		4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	ASPHD1	Q5U4P2	390 aa		4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	GATAD2A	Q86YP4	633 aa		4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	CENPI	Q92674	756 aa	Predicted RBP	4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	ATP2A3	Q93084	1043 aa		4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	EME1	Q96AY2	570 aa		4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	REXO5	Q96IC2	774 aa	Known RBP	4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	PRPF18	Q99633	342 aa	Known RBP	4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	ELAC2	Q9BQ52	826 aa	Known RBP	4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	MLXIP	Q9HAP2	919 aa		4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	TXNRD2	Q9NNW7	524 aa		4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	SLC8A2	Q9UPR5	921 aa		4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	LAMP3	Q9UQV4	416 aa		4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	NCAPD3	P42695	1498 aa		4.93	□□□□□ -1.62
NIFK-206	ENST00000481978	HMGXB3	Q12766	1538 aa		4.92	□□□□□ -1.62
NIFK-206	ENST00000481978	GOLGA6L3	A6NEY3	463 aa		4.92	□□□□□ -1.62
NIFK-206	ENST00000481978	RHOD	O00212	210 aa		4.92	□□□□□ -1.62
NIFK-206	ENST00000481978	SMAD6	O43541	496 aa	Known RBP	4.92	□□□□□ -1.62
NIFK-206	ENST00000481978	CCKBR	P32239	447 aa		4.92	□□□□□ -1.62
NIFK-206	ENST00000481978	PPM1A	P35813	382 aa		4.92	□□□□□ -1.62
NIFK-206	ENST00000481978	TEC	P42680	631 aa		4.92	□□□□□ -1.62
NIFK-206	ENST00000481978	PGGT1B	P53609	377 aa		4.92	□□□□□ -1.62
NIFK-206	ENST00000481978	RBM6	P78332	1123 aa	Known RBP	4.92	□□□□□ -1.62
NIFK-206	ENST00000481978	SHC2	P98077	582 aa		4.92	□□□□□ -1.62
NIFK-206	ENST00000481978	PTGR1	Q14914	329 aa		4.92	□□□□□ -1.62
NIFK-206	ENST00000481978	ZNF549	Q6P9A3	640 aa		4.92	□□□□□ -1.62
NIFK-206	ENST00000481978	B4GALNT4	Q76KP1	1039 aa		4.92	□□□□□ -1.62
NIFK-206	ENST00000481978	CCDC134	Q9H6E4	229 aa		4.92	□□□□□ -1.62
NIFK-206	ENST00000481978	TASP1	Q9H6P5	420 aa		4.92	□□□□□ -1.62
NIFK-206	ENST00000481978	ARFGAP3	Q9NP61	516 aa		4.92	□□□□□ -1.62
NIFK-206	ENST00000481978	SPAG4	Q9NPE6	437 aa		4.92	□□□□□ -1.62
NIFK-206	ENST00000481978	ANAPC4	Q9UJX5	808 aa		4.92	□□□□□ -1.62
NIFK-206	ENST00000481978	LMTK3	Q96Q04	1460 aa		4.92	□□□□□ -1.62
NIFK-206	ENST00000481978	TTC3	P53804	2025 aa		4.92	□□□□□ -1.62
NIFK-206	ENST00000481978		A6NNC1	897 aa		4.91	□□□□□ -1.62
NIFK-206	ENST00000481978	DNPH1	O43598	174 aa		4.91	□□□□□ -1.62
NIFK-206	ENST00000481978	LARGE1	O95461	756 aa		4.91	□□□□□ -1.62
NIFK-206	ENST00000481978	ALDOC	P09972	364 aa	Known RBP	4.91	□□□□□ -1.62
NIFK-206	ENST00000481978	CIITA	P33076	1130 aa		4.91	□□□□□ -1.62
NIFK-206	ENST00000481978	GRK5	P34947	590 aa		4.91	□□□□□ -1.62
NIFK-206	ENST00000481978	SPARCL1	Q14515	664 aa		4.91	□□□□□ -1.62
NIFK-206	ENST00000481978	STARD3	Q14849	445 aa		4.91	□□□□□ -1.62
NIFK-206	ENST00000481978	ACRBP	Q8NEB7	543 aa		4.91	□□□□□ -1.62
NIFK-206	ENST00000481978	SVIP	Q8NHG7	77 aa		4.91	□□□□□ -1.62
NIFK-206	ENST00000481978	FAM71B	Q8TC56	605 aa		4.91	□□□□□ -1.62
NIFK-206	ENST00000481978	AAMDC	Q9H7C9	122 aa		4.91	□□□□□ -1.62
NIFK-206	ENST00000481978	IL21R	Q9HBE5	538 aa		4.91	□□□□□ -1.62
NIFK-206	ENST00000481978	ZNF580	Q9UK33	172 aa		4.91	□□□□□ -1.62
NIFK-206	ENST00000481978	RAB21	Q9UL25	225 aa		4.91	□□□□□ -1.62
NIFK-206	ENST00000481978	SLC12A4	Q9UP95	1085 aa		4.91	□□□□□ -1.62
NIFK-206	ENST00000481978	BAZ1B	Q9UIG0	1483 aa	Known RBP	4.9	□□□□□ -1.62
NIFK-206	ENST00000481978	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.9	□□□□□ -1.63
NIFK-206	ENST00000481978	SLC38A8	A6NNN8	435 aa		4.9	□□□□□ -1.63
NIFK-206	ENST00000481978	FOXO6	A8MYZ6	492 aa		4.9	□□□□□ -1.63
NIFK-206	ENST00000481978	KIF28P	B7ZC32	967 aa		4.9	□□□□□ -1.63
NIFK-206	ENST00000481978	ASNA1	O43681	348 aa		4.9	□□□□□ -1.63
NIFK-206	ENST00000481978	IFNA2	P01563	188 aa		4.9	□□□□□ -1.63
NIFK-206	ENST00000481978	CHRNB1	P11230	501 aa		4.9	□□□□□ -1.63
NIFK-206	ENST00000481978	HOXB2	P14652	356 aa		4.9	□□□□□ -1.63
NIFK-206	ENST00000481978	AKT1	P31749	480 aa		4.9	□□□□□ -1.63
NIFK-206	ENST00000481978	CDK7	P50613	346 aa		4.9	□□□□□ -1.63
NIFK-206	ENST00000481978	ADPRH	P54922	357 aa		4.9	□□□□□ -1.63
NIFK-206	ENST00000481978	FAM3B	P58499	235 aa	Predicted RBP	4.9	□□□□□ -1.63
NIFK-206	ENST00000481978	KRTAP10-9	P60411	292 aa		4.9	□□□□□ -1.63

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