RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 PENKP01210 267 aaPredicted RBP17.29■□□□□ 0.36
SH3D21-203ENST00000480549 USP17L7P0C7H9 530 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 HOXD10P28358 340 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 PDIK1LQ8N165 341 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 OR10T2Q8NGX3 314 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 LINC01599Q8WXQ3 324 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 GLT1D1Q96MS3 346 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 UROC1Q96N76 676 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 ARHGEF4Q9NR80 690 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 COX16Q9P0S2 106 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 NVLO15381 856 aaKnown RBP17.28■□□□□ 0.36
SH3D21-203ENST00000480549 B4GALT3O60512 393 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 SUPT3HO75486 399 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 MAGEA6P43360 314 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 MPP2Q14168 576 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 SETDB1Q15047 1291 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 TMED2Q15363 201 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 EFHC2Q5JST6 749 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 SYCP2LQ5T4T6 812 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 LHX8Q68G74 356 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 KCNT2Q6UVM3 1135 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 IGDCC3Q8IVU1 814 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 CCDC33Q8N5R6 958 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 ATP11CQ8NB49 1132 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 PXYLP1Q8TE99 480 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 SNRNP27Q8WVK2 155 aaKnown RBP17.28■□□□□ 0.36
SH3D21-203ENST00000480549 FAM136AQ96C01 138 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 TMEM209Q96SK2 561 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 WDR6Q9NNW5 1121 aaKnown RBP17.28■□□□□ 0.36
SH3D21-203ENST00000480549 ANLNQ9NQW6 1124 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 ACTL7BQ9Y614 415 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 POC1B-GALNT4F8VUJ3 575 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 DGKIO75912 1065 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 ARL4AP40617 200 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 CBX3Q13185 183 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 NME3Q13232 169 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 BBS9Q3SYG4 887 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.28■□□□□ 0.361e-8■■■■■ 174
SH3D21-203ENST00000480549 AGGF1Q8N302 714 aaeCLIP17.28■□□□□ 0.36
SH3D21-203ENST00000480549 SLC43A3Q8NBI5 491 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 CCDC110Q8TBZ0 833 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 RNF139Q8WU17 664 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 TCP11X1B4DZS4 312 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 LRRTM3Q86VH5 581 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 METTL23Q86XA0 190 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 SLC7A14Q8TBB6 771 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 RAET1EQ8TD07 263 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 PTPRN2Q92932 1015 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 CREBZFQ9NS37 354 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 NMRK1Q9NWW6 199 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 DSEQ9UL01 958 aa17.28■□□□□ 0.36
SH3D21-203ENST00000480549 I6L893 689 aaPredicted RBP17.27■□□□□ 0.36
SH3D21-203ENST00000480549 AMHP03971 560 aa17.27■□□□□ 0.36
SH3D21-203ENST00000480549 UBTFL6P0CB48 400 aaPredicted RBP17.27■□□□□ 0.36
SH3D21-203ENST00000480549 BRAFP15056 766 aa17.27■□□□□ 0.36
SH3D21-203ENST00000480549 GJA8P48165 433 aa17.27■□□□□ 0.36
SH3D21-203ENST00000480549 RASA2Q15283 850 aa17.27■□□□□ 0.36
SH3D21-203ENST00000480549 FAXCQ5TGI0 409 aa17.27■□□□□ 0.36
SH3D21-203ENST00000480549 SRRM1Q8IYB3 904 aaKnown RBP17.27■□□□□ 0.36
SH3D21-203ENST00000480549 ADAM32Q8TC27 787 aa17.27■□□□□ 0.36
SH3D21-203ENST00000480549 SUSD3Q96L08 255 aa17.27■□□□□ 0.36
SH3D21-203ENST00000480549 TMEM237Q96Q45 408 aa17.27■□□□□ 0.36
SH3D21-203ENST00000480549 SLC9A7Q96T83 725 aa17.27■□□□□ 0.36
SH3D21-203ENST00000480549 TEX264Q9Y6I9 313 aa17.27■□□□□ 0.36
SH3D21-203ENST00000480549 A0A1W2PQ45 241 aaPredicted RBP17.27■□□□□ 0.35
SH3D21-203ENST00000480549 A0A1W2PQY0 241 aa17.27■□□□□ 0.35
SH3D21-203ENST00000480549 MFSD11O43934 449 aa17.27■□□□□ 0.35
SH3D21-203ENST00000480549 GCATO75600 419 aa17.27■□□□□ 0.35
SH3D21-203ENST00000480549 TOMM70O94826 608 aa17.27■□□□□ 0.35
SH3D21-203ENST00000480549 TMCC1O94876 653 aa17.27■□□□□ 0.35
SH3D21-203ENST00000480549 LTFP02788 710 aa17.27■□□□□ 0.35
SH3D21-203ENST00000480549 HNRNPCP07910 306 aaKnown RBP eCLIP17.27■□□□□ 0.35
SH3D21-203ENST00000480549 ZCCHC18P0CG32 403 aa17.27■□□□□ 0.35
SH3D21-203ENST00000480549 BDNFP23560 247 aa17.27■□□□□ 0.35
SH3D21-203ENST00000480549 EFTUD2Q15029 972 aaKnown RBP eCLIP17.27■□□□□ 0.352e-7■■■■□ 24.5
SH3D21-203ENST00000480549 CCDC6Q16204 474 aa17.27■□□□□ 0.35
SH3D21-203ENST00000480549 DCLRE1AQ6PJP8 1040 aa17.27■□□□□ 0.35
SH3D21-203ENST00000480549 TRABD2AQ86V40 505 aa17.27■□□□□ 0.35
SH3D21-203ENST00000480549 PGAP3Q96FM1 320 aaPredicted RBP17.27■□□□□ 0.35
SH3D21-203ENST00000480549 TSEN34Q9BSV6 310 aaKnown RBP17.27■□□□□ 0.35
SH3D21-203ENST00000480549 MLXIPLQ9NP71 852 aa17.27■□□□□ 0.35
SH3D21-203ENST00000480549 FETUBQ9UGM5 382 aa17.27■□□□□ 0.35
SH3D21-203ENST00000480549 SLC24A2Q9UI40 661 aa17.27■□□□□ 0.35
SH3D21-203ENST00000480549 ENTPD5O75356 428 aa17.26■□□□□ 0.35
SH3D21-203ENST00000480549 VAV1P15498 845 aa17.26■□□□□ 0.35
SH3D21-203ENST00000480549 YY1P25490 414 aa17.26■□□□□ 0.35
SH3D21-203ENST00000480549 RINLQ6ZS11 566 aa17.26■□□□□ 0.35
SH3D21-203ENST00000480549 C3orf62Q6ZUJ4 267 aa17.26■□□□□ 0.35
SH3D21-203ENST00000480549 HIC2Q96JB3 615 aa17.26■□□□□ 0.35
SH3D21-203ENST00000480549 RMDN2Q96LZ7 410 aa17.26■□□□□ 0.35
SH3D21-203ENST00000480549 ACSS3Q9H6R3 686 aa17.26■□□□□ 0.35
SH3D21-203ENST00000480549 PPCSQ9HAB8 311 aa17.26■□□□□ 0.35
SH3D21-203ENST00000480549 CAPN9O14815 690 aa17.26■□□□□ 0.35
SH3D21-203ENST00000480549 AVILO75366 819 aa17.26■□□□□ 0.35
SH3D21-203ENST00000480549 METTL18O95568 372 aa17.26■□□□□ 0.35
SH3D21-203ENST00000480549 TSHRP16473 764 aa17.26■□□□□ 0.35
SH3D21-203ENST00000480549 PHBP35232 272 aa17.26■□□□□ 0.35
SH3D21-203ENST00000480549 ELK3P41970 407 aa17.26■□□□□ 0.35
SH3D21-203ENST00000480549 DPYSQ14117 519 aa17.26■□□□□ 0.35
SH3D21-203ENST00000480549 CLLU1OSQ5K130 101 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms