RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 CCDC47Q96A33 483 aaKnown RBP6.64□□□□□ -1.35
PBRM1-220ENST00000480064 FAM149B1Q96BN6 582 aa6.64□□□□□ -1.35
PBRM1-220ENST00000480064 INTS12Q96CB8 462 aaKnown RBP6.64□□□□□ -1.35
PBRM1-220ENST00000480064 RNFT2Q96EX2 444 aa6.64□□□□□ -1.35
PBRM1-220ENST00000480064 VPS50Q96JG6 964 aa6.64□□□□□ -1.35
PBRM1-220ENST00000480064 HAPLN3Q96S86 360 aa6.64□□□□□ -1.35
PBRM1-220ENST00000480064 SPATA25Q9BR10 227 aa6.64□□□□□ -1.35
PBRM1-220ENST00000480064 HGH1Q9BTY7 390 aa6.64□□□□□ -1.35
PBRM1-220ENST00000480064 CD248Q9HCU0 757 aa6.64□□□□□ -1.35
PBRM1-220ENST00000480064 KCNK9Q9NPC2 374 aa6.64□□□□□ -1.35
PBRM1-220ENST00000480064 NTMQ9P121 344 aa6.64□□□□□ -1.35
PBRM1-220ENST00000480064 SLC12A4Q9UP95 1085 aa6.64□□□□□ -1.35
PBRM1-220ENST00000480064 SORCS3Q9UPU3 1222 aa6.64□□□□□ -1.35
PBRM1-220ENST00000480064 SNX14Q9Y5W7 946 aa6.64□□□□□ -1.35
PBRM1-220ENST00000480064 TTC36A6NLP5 189 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 F5H697 171 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 GRM8O00222 908 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 PSMD9O00233 223 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 NKX2-8O15522 239 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 ADAM20O43506 726 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 TRIAP1O43715 76 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 CCNT1O60563 726 aaKnown RBP6.63□□□□□ -1.35
PBRM1-220ENST00000480064 PLA2G1BP04054 148 aaKnown RBP6.63□□□□□ -1.35
PBRM1-220ENST00000480064 ALDOAP04075 364 aaKnown RBP6.63□□□□□ -1.35
PBRM1-220ENST00000480064 MMP8P22894 467 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 CDH8P55286 799 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 RPL15P61313 204 aaKnown RBP6.63□□□□□ -1.35
PBRM1-220ENST00000480064 OLR1P78380 273 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 TMEM115Q12893 351 aaPredicted RBP6.63□□□□□ -1.35
PBRM1-220ENST00000480064 GARNL3Q5VVW2 1013 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 KRT80Q6KB66 452 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 CRELD2Q6UXH1 353 aaPredicted RBP6.63□□□□□ -1.35
PBRM1-220ENST00000480064 CLNKQ7Z7G1 428 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 ZFPM1Q8IX07 1006 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 ABRAQ8N0Z2 381 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 CCAR2Q8N163 923 aaKnown RBP6.63□□□□□ -1.35
PBRM1-220ENST00000480064 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.63□□□□□ -1.35
PBRM1-220ENST00000480064 TMCO5AQ8N6Q1 288 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.63□□□□□ -1.35
PBRM1-220ENST00000480064 GSDMBQ8TAX9 411 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 NCSTNQ92542 709 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 VPS33AQ96AX1 596 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 ZNF845Q96IR2 970 aaPredicted RBP6.63□□□□□ -1.35
PBRM1-220ENST00000480064 C17orf80Q9BSJ5 609 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 DESI2Q9BSY9 194 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 NDST4Q9H3R1 872 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 TTC12Q9H892 705 aaPredicted RBP6.63□□□□□ -1.35
PBRM1-220ENST00000480064 THAP1Q9NVV9 213 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 RNF181Q9P0P0 153 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 CD207Q9UJ71 328 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 PCDHB2Q9Y5E7 798 aa6.63□□□□□ -1.35
PBRM1-220ENST00000480064 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.63□□□□□ -1.35
PBRM1-220ENST00000480064 RUSC2Q8N2Y8 1516 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 C17orf113A0A1B0GUU1 675 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 PMS2P1A4D2B8 440 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 FAM90A7PA6NKC0 464 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 C3orf70A6NLC5 250 aaPredicted RBP6.62□□□□□ -1.35
PBRM1-220ENST00000480064 FAM90A22PA8MWA6 464 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 FAM90A12PA8MX19 464 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 FAM90A23PA8MXZ1 464 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 EIF3CLB5ME19 914 aaKnown RBP6.62□□□□□ -1.35
PBRM1-220ENST00000480064 TEX22C9J3V5 150 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 ZNF213O14771 459 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 ATP5BP06576 529 aaKnown RBP6.62□□□□□ -1.35
PBRM1-220ENST00000480064 RARGP13631 454 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 PBX3P40426 434 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 MMP14P50281 582 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 ANXA11P50995 505 aaKnown RBP6.62□□□□□ -1.35
PBRM1-220ENST00000480064 TIRAPP58753 221 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 EFNB1P98172 346 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 MC2RQ01718 297 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 TLE3Q04726 772 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 TFCP2Q12800 502 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 FHL3Q13643 280 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 RNF151Q2KHN1 245 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 SLC9B1Q4ZJI4 515 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 RAB41Q5JT25 222 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 RBM20Q5T481 1227 aaKnown RBP6.62□□□□□ -1.35
PBRM1-220ENST00000480064 ERMARDQ5T6L9 678 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 TTI2Q6NXR4 508 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 DRICH1Q6PGQ1 229 aaPredicted RBP6.62□□□□□ -1.35
PBRM1-220ENST00000480064 SHQ1Q6PI26 577 aaKnown RBP6.62□□□□□ -1.35
PBRM1-220ENST00000480064 PET117Q6UWS5 81 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 CHST9Q7L1S5 443 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 GPRIN1Q7Z2K8 1008 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 DNAAF5Q86Y56 855 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 HSCBQ8IWL3 235 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 SCN4BQ8IWT1 228 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 IZUMO1Q8IYV9 350 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 SCML4Q8N228 414 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 POC5Q8NA72 575 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 POGLUT1Q8NBL1 392 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 SNX19Q92543 992 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 NPIPB3Q92617 1050 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 KCNJ9Q92806 393 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 PERPQ96FX8 193 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 KLHL15Q96M94 604 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 DPCDQ9BVM2 203 aaPredicted RBP6.62□□□□□ -1.35
PBRM1-220ENST00000480064 CTDSP1Q9GZU7 261 aa6.62□□□□□ -1.35
PBRM1-220ENST00000480064 C2orf40Q9H1Z8 148 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms