RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 POPDC2Q9HBU9 364 aa18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 SERGEFQ9UGK8 458 aa18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 EPG5Q9HCE0 2579 aa18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 FAM47DPA6NHR8 397 aa18■□□□□ 0.47
ECHDC1-216ENST00000479525 H0Y626 953 aa18■□□□□ 0.47
ECHDC1-216ENST00000479525 FOXN3O00409 490 aaPredicted RBP18■□□□□ 0.47
ECHDC1-216ENST00000479525 TIMM44O43615 452 aa18■□□□□ 0.47
ECHDC1-216ENST00000479525 LUC7L3O95232 432 aaKnown RBP18■□□□□ 0.47
ECHDC1-216ENST00000479525 APOEP02649 317 aa18■□□□□ 0.47
ECHDC1-216ENST00000479525 HOXD12P35452 270 aa18■□□□□ 0.47
ECHDC1-216ENST00000479525 CLCN1P35523 988 aa18■□□□□ 0.47
ECHDC1-216ENST00000479525 ZNF445P59923 1031 aa18■□□□□ 0.47
ECHDC1-216ENST00000479525 PIP4P1Q86T03 277 aa18■□□□□ 0.47
ECHDC1-216ENST00000479525 TMEM110Q86TL2 294 aa18■□□□□ 0.47
ECHDC1-216ENST00000479525 METTL3Q86U44 580 aaKnown RBP18■□□□□ 0.47
ECHDC1-216ENST00000479525 FIBINQ8TAL6 211 aa18■□□□□ 0.47
ECHDC1-216ENST00000479525 PPP1R13BQ96KQ4 1090 aa18■□□□□ 0.47
ECHDC1-216ENST00000479525 NUP58Q9BVL2 599 aa18■□□□□ 0.47
ECHDC1-216ENST00000479525 SCNM1Q9BWG6 230 aa18■□□□□ 0.47
ECHDC1-216ENST00000479525 ADAM33Q9BZ11 813 aa18■□□□□ 0.47
ECHDC1-216ENST00000479525 CEP83Q9Y592 693 aa18■□□□□ 0.47
ECHDC1-216ENST00000479525 SNX10Q9Y5X0 201 aa18■□□□□ 0.47
ECHDC1-216ENST00000479525 USP24Q9UPU5 2620 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 A0A1B0GVT2 93 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 TYW5A2RUC4 315 aaKnown RBP17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 METTL12A8MUP2 240 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 KCNK3O14649 394 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 FSBPO95073 299 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 IGLV3-25P01717 112 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 ATP5BP06576 529 aaKnown RBP17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 VAV1P15498 845 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 GNSP15586 552 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 PDGFRAP16234 1089 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 TFE3P19532 575 aaPredicted RBP17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 MZF1P28698 734 aaPredicted RBP17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 DPP6P42658 865 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 YWHAZP63104 245 aaKnown RBP17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 NME3Q13232 169 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 RAPGEF1Q13905 1077 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 PTPN20Q4JDL3 420 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 C2CD6Q53TS8 623 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 MIIPQ5JXC2 388 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 TAF3Q5VWG9 929 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 ENOSF1Q7L5Y1 443 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 GANCQ8TET4 914 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 RNF34Q969K3 372 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 SLC32A1Q9H598 525 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 THAP9Q9H5L6 903 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 SAMSN1Q9NSI8 373 aaKnown RBP17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 DDIT4Q9NX09 232 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 SLCO3A1Q9UIG8 710 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 RALYQ9UKM9 306 aaKnown RBP17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 WASF3Q9UPY6 502 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 ERVW-1Q9UQF0 538 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 FHOD1Q9Y613 1164 aa17.99■□□□□ 0.47
ECHDC1-216ENST00000479525 A0A1B0GTW7 788 aa17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 PLK4O00444 970 aa17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 MID1O15344 667 aa17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 SART1O43290 800 aaKnown RBP17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 GJB3O75712 270 aa17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 DNTTP04053 509 aa17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 SYPP08247 313 aa17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 OXTRP30559 389 aa17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 CSNK1EP49674 416 aaKnown RBP17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 RNASE9P60153 205 aaKnown RBP17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 SHC2P98077 582 aa17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 MAN2A1Q16706 1144 aa17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 DPY19L2P1Q6NXN4 242 aa17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 MMAAQ8IVH4 418 aaKnown RBP17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 PNPLA1Q8N8W4 532 aa17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 MLKLQ8NB16 471 aa17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 OR52K2Q8NGK3 314 aa17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 DNASE2BQ8WZ79 361 aa17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 AZIN2Q96A70 460 aa17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 KLK13Q9UKR3 277 aa17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 ZFHX4Q86UP3 3567 aa17.98■□□□□ 0.47
ECHDC1-216ENST00000479525 A0A1W2PP55 124 aa17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 BCAT2O15382 392 aaPredicted RBP17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 SEMA4FO95754 770 aa17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 METAP1P53582 386 aa17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 ST8SIA6P61647 398 aa17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 KCNMA1Q12791 1236 aa17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 NNTQ13423 1086 aa17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 MPP7Q5T2T1 576 aa17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 ZNF776Q68DI1 518 aaPredicted RBP17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 RABEPKQ7Z6M1 372 aa17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 KNL1Q8NG31 2342 aa17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 STK32AQ8WU08 396 aa17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 IGSF8Q969P0 613 aa17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 TTC17Q96AE7 1141 aa17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 DDX50Q9BQ39 737 aaKnown RBP17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 NDST4Q9H3R1 872 aa17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 GAREM1Q9H706 876 aa17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 TMPRSS4Q9NRS4 437 aa17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 TAB2Q9NYJ8 693 aa17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 SUSD2Q9UGT4 822 aa17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 FNDC3AQ9Y2H6 1198 aaKnown RBP17.97■□□□□ 0.47
ECHDC1-216ENST00000479525 PTPRBP23467 1997 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 KCNU1A8MYU2 1149 aa17.96■□□□□ 0.47
ECHDC1-216ENST00000479525 F5H5T6 163 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms