RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 JCHAINP01591 159 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 SYN1P17600 705 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 TUFMP49411 452 aaKnown RBP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 GLUD2P49448 558 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 IRAK1P51617 712 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 KCNQ1P51787 676 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 PPP2R2AP63151 447 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 CRADDP78560 199 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 PPP2R5DQ14738 602 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 PRKD1Q15139 912 aaPredicted RBP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 SMAD1Q15797 465 aaKnown RBP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 PKN2Q16513 984 aaKnown RBP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 PIK3R6Q5UE93 754 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 CEP128Q6ZU80 1094 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 CAND1Q86VP6 1230 aaKnown RBP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 RELL1Q8IUW5 271 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 AGGF1Q8N302 714 aaeCLIP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 ARHGAP18Q8N392 663 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 BADQ92934 168 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 ARHGEF2Q92974 986 aaKnown RBP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 PGM2Q96G03 612 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 ROPN1BQ9BZX4 212 aaPredicted RBP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 ROPN1Q9HAT0 212 aaPredicted RBP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 IL37Q9NZH6 218 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 ZMYND8Q9ULU4 1186 aaPredicted RBP6.82□□□□□ -1.32
CCDC30-209ENST00000477155 TLR6Q9Y2C9 796 aa6.82□□□□□ -1.32
CCDC30-209ENST00000477155 CEP290O15078 2479 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.81□□□□□ -1.32
CCDC30-209ENST00000477155 GOLGA6L7A0A1B0GV03 622 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 ZBTB24O43167 697 aaPredicted RBP6.81□□□□□ -1.32
CCDC30-209ENST00000477155 GJB5O95377 273 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 APOEP02649 317 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 URODP06132 367 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 SERPINB6P35237 376 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 GARSP41250 739 aaKnown RBP6.81□□□□□ -1.32
CCDC30-209ENST00000477155 ALDH1A3P47895 512 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 SMARCB1Q12824 385 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 STAT4Q14765 748 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 TMED2Q15363 201 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 RAP1GAP2Q684P5 730 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 CASC4Q6P4E1 433 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 KDM7AQ6ZMT4 941 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 EXOC3L1Q86VI1 746 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 CIR1Q86X95 450 aaPredicted RBP6.81□□□□□ -1.32
CCDC30-209ENST00000477155 ZNF354CQ86Y25 554 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 MPP5Q8N3R9 675 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 FBF1Q8TES7 1133 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 SPATA17Q96L03 361 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 TTC25Q96NG3 672 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 PRKAG2Q9UGJ0 569 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 TANC1Q9C0D5 1861 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 MYO16Q9Y6X6 1858 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 FAM92AA1XBS5 289 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 CNTN5O94779 1100 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 PTPN3P26045 913 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 ELF1P32519 619 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 SESN2P58004 480 aaPredicted RBP6.81□□□□□ -1.32
CCDC30-209ENST00000477155 ZBTB17Q13105 803 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 SRRM1Q8IYB3 904 aaKnown RBP6.81□□□□□ -1.32
CCDC30-209ENST00000477155 ATP11CQ8NB49 1132 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 TLCD1Q96CP7 247 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 TBC1D31Q96DN5 1066 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 SLC39A13Q96H72 371 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 TMEM109Q9BVC6 243 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 SLC39A8Q9C0K1 460 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 MLXIPLQ9NP71 852 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 KCNK9Q9NPC2 374 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 PPANQ9NQ55 473 aaKnown RBP6.81□□□□□ -1.32
CCDC30-209ENST00000477155 GKN1Q9NS71 199 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 CLIC5Q9NZA1 410 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 AFF4Q9UHB7 1163 aaKnown RBP6.81□□□□□ -1.32
CCDC30-209ENST00000477155 SLC12A6Q9UHW9 1150 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 BACE2Q9Y5Z0 518 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 TRDMT1O14717 391 aaKnown RBP6.81□□□□□ -1.32
CCDC30-209ENST00000477155 EFEMP2O95967 443 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 FGBP02675 491 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 MX2P20592 715 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 DSG1Q02413 1049 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 PLD1Q13393 1074 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 ALFQ53S48 1182 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 MS4A13Q5J8X5 152 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 PPP1R21Q6ZMI0 780 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 RNF168Q8IYW5 571 aaPredicted RBP6.81□□□□□ -1.32
CCDC30-209ENST00000477155 CFAP52Q8N1V2 620 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 MGARPQ8TDB4 240 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 C2orf15Q8WU43 125 aaKnown RBP6.81□□□□□ -1.32
CCDC30-209ENST00000477155 APOL2Q9BQE5 337 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 FAM107BQ9H098 131 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 CATSPERBQ9H7T0 1116 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 MRPL17Q9NRX2 175 aaKnown RBP6.81□□□□□ -1.32
CCDC30-209ENST00000477155 RABGEF1Q9UJ41 708 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 TEX264Q9Y6I9 313 aa6.81□□□□□ -1.32
CCDC30-209ENST00000477155 E7ESA3 106 aa6.8□□□□□ -1.32
CCDC30-209ENST00000477155 NCAM2O15394 837 aa6.8□□□□□ -1.32
CCDC30-209ENST00000477155 TEX28O15482 410 aa6.8□□□□□ -1.32
CCDC30-209ENST00000477155 OPHN1O60890 802 aa6.8□□□□□ -1.32
CCDC30-209ENST00000477155 CDH16O75309 829 aa6.8□□□□□ -1.32
CCDC30-209ENST00000477155 FGF18O76093 207 aa6.8□□□□□ -1.32
CCDC30-209ENST00000477155 AGTP01019 485 aa6.8□□□□□ -1.32
CCDC30-209ENST00000477155 IVLP07476 585 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms