RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 ATXN1LP0C7T5 689 aaKnown RBP12.09□□□□□ -0.47
VARS2-208ENST00000477052 USP8P40818 1118 aa12.09□□□□□ -0.47
VARS2-208ENST00000477052 STK19P49842 368 aaPredicted RBP12.09□□□□□ -0.47
VARS2-208ENST00000477052 NUCB2P80303 420 aa12.09□□□□□ -0.47
VARS2-208ENST00000477052 MS4A13Q5J8X5 152 aa12.09□□□□□ -0.47
VARS2-208ENST00000477052 NUGGCQ68CJ6 796 aa12.09□□□□□ -0.47
VARS2-208ENST00000477052 ZNF776Q68DI1 518 aaPredicted RBP12.09□□□□□ -0.47
VARS2-208ENST00000477052 HJURPQ8NCD3 748 aaPredicted RBP12.09□□□□□ -0.47
VARS2-208ENST00000477052 FIBINQ8TAL6 211 aa12.09□□□□□ -0.47
VARS2-208ENST00000477052 SLC39A13Q96H72 371 aa12.09□□□□□ -0.47
VARS2-208ENST00000477052 RPL10LQ96L21 214 aaKnown RBP12.09□□□□□ -0.47
VARS2-208ENST00000477052 HSFY1Q96LI6 401 aa12.09□□□□□ -0.47
VARS2-208ENST00000477052 ZDHHC5Q9C0B5 715 aa12.09□□□□□ -0.47
VARS2-208ENST00000477052 BTBD1Q9H0C5 482 aa12.09□□□□□ -0.47
VARS2-208ENST00000477052 COX16Q9P0S2 106 aa12.09□□□□□ -0.47
VARS2-208ENST00000477052 SLCO3A1Q9UIG8 710 aa12.09□□□□□ -0.47
VARS2-208ENST00000477052 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.09□□□□□ -0.47
VARS2-208ENST00000477052 ZFYVE26Q68DK2 2539 aa12.09□□□□□ -0.47
VARS2-208ENST00000477052 DMXL2Q8TDJ6 3036 aa12.09□□□□□ -0.47
VARS2-208ENST00000477052 A0A1W2PP55 124 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 PLK4O00444 970 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 CAPN9O14815 690 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 WNT9AO14904 365 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 THAP12O43422 761 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 GRAP2O75791 330 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 FBXO21O94952 628 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 CER1O95813 267 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 AFPP02771 609 aaKnown RBP12.08□□□□□ -0.48
VARS2-208ENST00000477052 VAV1P15498 845 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 SLC9A1P19634 815 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 GGCXP38435 758 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 AFF3P51826 1226 aaKnown RBP12.08□□□□□ -0.48
VARS2-208ENST00000477052 METAP1P53582 386 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 ZNF445P59923 1031 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 GCNT1Q02742 428 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 RING1Q06587 406 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 CETN1Q12798 172 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 PAK1Q13153 545 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 CDH18Q13634 790 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 STILQ15468 1287 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 ARHGAP44Q17R89 818 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 ZNF423Q2M1K9 1284 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 PITRM1Q5JRX3 1037 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 MPP7Q5T2T1 576 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 CHSY1Q86X52 802 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 PASD1Q8IV76 773 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 MMAAQ8IVH4 418 aaKnown RBP12.08□□□□□ -0.48
VARS2-208ENST00000477052 RHBDD1Q8TEB9 315 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 TTC17Q96AE7 1141 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 SERPINB11Q96P15 392 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 MED15Q96RN5 788 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 ORAI3Q9BRQ5 295 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 SLC4A5Q9BY07 1137 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 RSPH9Q9H1X1 276 aaPredicted RBP12.08□□□□□ -0.48
VARS2-208ENST00000477052 NEUROG2Q9H2A3 272 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 PABPC3Q9H361 631 aaKnown RBP12.08□□□□□ -0.48
VARS2-208ENST00000477052 EBF2Q9HAK2 575 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 FBXL12Q9NXK8 326 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 SUN2Q9UH99 717 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 AJAP1Q9UKB5 411 aaPredicted RBP12.08□□□□□ -0.48
VARS2-208ENST00000477052 ERVW-1Q9UQF0 538 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 TLR6Q9Y2C9 796 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 ANKRD6Q9Y2G4 727 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 NFE2L3Q9Y4A8 694 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 CEP83Q9Y592 693 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 PKD1L2Q7Z442 2459 aa12.08□□□□□ -0.48
VARS2-208ENST00000477052 CACNA1GO43497 2377 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 BICDL2A1A5D9 508 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 BECN2A8MW95 431 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 H0Y626 953 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 H0Y8X5 98 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 P4HA2O15460 535 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 IRAK2O43187 625 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 PLXNA2O75051 1894 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 TRIM16O95361 564 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 IGHV4-34P06331 123 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 PNMA6AP0CW24 399 aaPredicted RBP12.07□□□□□ -0.48
VARS2-208ENST00000477052 TACR2P21452 398 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 RDXP35241 583 aaKnown RBP12.07□□□□□ -0.48
VARS2-208ENST00000477052 ANP32AP39687 249 aaKnown RBP12.07□□□□□ -0.48
VARS2-208ENST00000477052 PSMD8P48556 350 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 RPL34P49207 117 aaKnown RBP12.07□□□□□ -0.48
VARS2-208ENST00000477052 IRAK1P51617 712 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 GALCP54803 685 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 ST8SIA6P61647 398 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 SCAPQ12770 1279 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 E2F5Q15329 346 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 CST6Q15828 149 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 CAMK4Q16566 473 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 HNRNPA1L2Q32P51 320 aaKnown RBP12.07□□□□□ -0.48
VARS2-208ENST00000477052 C9orf64Q5T6V5 341 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 NCEH1Q6PIU2 408 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 C19orf48Q6RUI8 117 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 STK40Q8N2I9 435 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 ZNF606Q8WXB4 792 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 ADAMTS14Q8WXS8 1223 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 SLC6A18Q96N87 628 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 FAM129BQ96TA1 746 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 TOR4AQ9NXH8 423 aa12.07□□□□□ -0.48
VARS2-208ENST00000477052 CNTN6Q9UQ52 1028 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms