RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 SFMBT1Q9UHJ3 866 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 USP25Q9UHP3 1055 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 PCDHA7Q9UN72 937 aa13.1□□□□□ -0.31
SKA3-206ENST00000475251 TP53BP1Q12888 1972 aaPredicted RBP13.1□□□□□ -0.31
SKA3-206ENST00000475251 TARSL2A2RTX5 802 aaKnown RBP13.09□□□□□ -0.31
SKA3-206ENST00000475251 TLX3O43711 291 aaPredicted RBP13.09□□□□□ -0.31
SKA3-206ENST00000475251 MAGEC1O60732 1142 aa13.09□□□□□ -0.31
SKA3-206ENST00000475251 TBL1XO60907 577 aa13.09□□□□□ -0.31
SKA3-206ENST00000475251 PLXNA2O75051 1894 aa13.09□□□□□ -0.31
SKA3-206ENST00000475251 C1QL1O75973 258 aa13.09□□□□□ -0.31
SKA3-206ENST00000475251 MOCS3O95396 460 aa13.09□□□□□ -0.31
SKA3-206ENST00000475251 MXI1P50539 228 aa13.09□□□□□ -0.31
SKA3-206ENST00000475251 RAD23BP54727 409 aa13.09□□□□□ -0.31
SKA3-206ENST00000475251 YWHAEP62258 255 aaKnown RBP13.09□□□□□ -0.31
SKA3-206ENST00000475251 ADIGQ0VDE8 80 aa13.09□□□□□ -0.31
SKA3-206ENST00000475251 BST2Q10589 180 aaKnown RBP13.09□□□□□ -0.31
SKA3-206ENST00000475251 ARID5BQ14865 1188 aa13.09□□□□□ -0.31
SKA3-206ENST00000475251 PIK3R6Q5UE93 754 aa13.09□□□□□ -0.31
SKA3-206ENST00000475251 BSPRYQ5W0U4 402 aa13.09□□□□□ -0.31
SKA3-206ENST00000475251 ATL3Q6DD88 541 aa13.09□□□□□ -0.31
SKA3-206ENST00000475251 FBXL19Q6PCT2 694 aa13.09□□□□□ -0.31
SKA3-206ENST00000475251 SND1Q7KZF4 910 aaKnown RBP eCLIP13.09□□□□□ -0.31
SKA3-206ENST00000475251 SCML4Q8N228 414 aa13.09□□□□□ -0.31
SKA3-206ENST00000475251 HJURPQ8NCD3 748 aaPredicted RBP13.09□□□□□ -0.31
SKA3-206ENST00000475251 FBXL13Q8NEE6 735 aa13.09□□□□□ -0.31
SKA3-206ENST00000475251 TTC17Q96AE7 1141 aa13.09□□□□□ -0.31
SKA3-206ENST00000475251 CNGB3Q9NQW8 809 aa13.09□□□□□ -0.31
SKA3-206ENST00000475251 SERTAD1Q9UHV2 236 aa13.09□□□□□ -0.31
SKA3-206ENST00000475251 TSPAN16Q9UKR8 245 aa13.09□□□□□ -0.31
SKA3-206ENST00000475251 CFAP45Q9UL16 551 aa13.09□□□□□ -0.31
SKA3-206ENST00000475251 A0A1W2PP55 124 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 MID1O15344 667 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 SIN3BO75182 1162 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 ADH1BP00325 375 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 SETSIPP0DME0 302 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 PLA2G2AP14555 144 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 CKMT2P17540 419 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 CD70P32970 193 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 NUDT1P36639 197 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 RXRGP48443 463 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 CDH18Q13634 790 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 GOLGA7BQ2TAP0 167 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 SGO2Q562F6 1265 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 PRAMEF14Q5SWL7 426 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 BHLHA9Q7RTU4 235 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 MMAAQ8IVH4 418 aaKnown RBP13.08□□□□□ -0.32
SKA3-206ENST00000475251 FIBINQ8TAL6 211 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 KCTD13Q8WZ19 329 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 TSC1Q92574 1164 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 EDEM1Q92611 657 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 AZIN2Q96A70 460 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 SERAC1Q96JX3 654 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 NEUROG2Q9H2A3 272 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 RAB20Q9NX57 234 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 CLCA2Q9UQC9 943 aa13.08□□□□□ -0.32
SKA3-206ENST00000475251 EDDM13A0A1B0GTR0 161 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 A0A1W2PR77 199 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 YJEFN3A6XGL0 299 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 E7ENQ6 273 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 K7ELQ4 463 aaPredicted RBP13.07□□□□□ -0.32
SKA3-206ENST00000475251 ERVH48-1M5A8F1 160 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 TLR4O00206 839 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 MSI1O43347 362 aaKnown RBP13.07□□□□□ -0.32
SKA3-206ENST00000475251 ACTN4O43707 911 aaKnown RBP13.07□□□□□ -0.32
SKA3-206ENST00000475251 ACSL4O60488 711 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 WNT1P04628 370 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 SRPRAP08240 638 aaKnown RBP13.07□□□□□ -0.32
SKA3-206ENST00000475251 GOT1P17174 413 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 C5AR1P21730 350 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 GLDCP23378 1020 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 SLC8A1P32418 973 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 CSKP41240 450 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 NXPH1P58417 271 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 E2F1Q01094 437 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 OVGP1Q12889 678 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 ADAM9Q13443 819 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 SHBQ15464 509 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 HS1BP3Q53T59 392 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 SFMBT2Q5VUG0 894 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 RNF219Q5W0B1 726 aaPredicted RBP13.07□□□□□ -0.32
SKA3-206ENST00000475251 MSANTD2Q6P1R3 559 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 PRPF39Q86UA1 669 aaKnown RBP13.07□□□□□ -0.32
SKA3-206ENST00000475251 DHX40Q8IX18 779 aaKnown RBP13.07□□□□□ -0.32
SKA3-206ENST00000475251 ZC3H3Q8IXZ2 948 aaKnown RBP13.07□□□□□ -0.32
SKA3-206ENST00000475251 MFSD2AQ8NA29 543 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 RFFLQ8WZ73 363 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 IRGQQ8WZA9 623 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 TATDN2Q93075 761 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 MYO19Q96H55 970 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 SERGEFQ9UGK8 458 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 KIAA1257Q9ULG3 409 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 CEP83Q9Y592 693 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 RAI2Q9Y5P3 530 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 KNL1Q8NG31 2342 aa13.07□□□□□ -0.32
SKA3-206ENST00000475251 CBX4O00257 560 aa13.06□□□□□ -0.32
SKA3-206ENST00000475251 BRINP1O60477 761 aa13.06□□□□□ -0.32
SKA3-206ENST00000475251 IGLV3-27P01718 113 aa13.06□□□□□ -0.32
SKA3-206ENST00000475251 CD19P15391 556 aa13.06□□□□□ -0.32
SKA3-206ENST00000475251 ACP1P24666 158 aa13.06□□□□□ -0.32
SKA3-206ENST00000475251 NNMTP40261 264 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms