RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 FAM228BP0C875 321 aa18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 PABPC1P11940 636 aaKnown RBP18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 CD70P32970 193 aa18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 RAB6CQ53S08 254 aa18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 FSCBQ5H9T9 825 aa18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 RABGAP1LQ5R372 815 aa18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 RASSF3Q86WH2 238 aa18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 FAM131BQ86XD5 332 aa18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 DNAAF5Q86Y56 855 aa18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 MFN1Q8IWA4 741 aa18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 AHI1Q8N157 1196 aa18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 TRIM11Q96F44 468 aa18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 CNPY3Q9BT09 278 aa18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 ANP32EQ9BTT0 268 aa18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 SIK2Q9H0K1 926 aa18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 RAB6CQ9H0N0 254 aa18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 OSBPL2Q9H1P3 480 aa18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 KIAA1522Q9P206 1035 aaPredicted RBP18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 NENFQ9UMX5 172 aa18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 R4GN57 208 aa18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 CACNA1IQ9P0X4 2223 aa18.27■□□□□ 0.52
RPUSD3-214ENST00000473522 A0A1W2PQF6 199 aa18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 ANKRD62A6NC57 917 aa18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 HRO43593 1189 aa18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 FNTBP49356 437 aa18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 PLK1P53350 603 aa18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 NRG1Q02297 640 aaPredicted RBP18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 LMAN2Q12907 356 aa18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 MAPK8IP2Q13387 824 aaPredicted RBP18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 SLC12A1Q13621 1099 aa18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 SDE2Q6IQ49 451 aa18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 ALKBH5Q6P6C2 394 aaKnown RBP18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 DCUN1D2Q6PH85 259 aa18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 CHST9Q7L1S5 443 aa18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 CHPFQ8IZ52 775 aa18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 CCAR2Q8N163 923 aaKnown RBP18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 CARNMT1Q8N4J0 409 aa18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 FNIP1Q8TF40 1166 aa18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 FAM172AQ8WUF8 416 aa18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 NTAN1Q96AB6 310 aa18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 RPRD1AQ96P16 312 aaPredicted RBP18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 MCEEQ96PE7 176 aa18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 ZDHHC4Q9NPG8 344 aa18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 TMPRSS4Q9NRS4 437 aa18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 CNOT8Q9UFF9 292 aaKnown RBP18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 INTS6Q9UL03 887 aaKnown RBP18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 VANGL2Q9ULK5 521 aa18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 TBC1D30Q9Y2I9 924 aa18.26■□□□□ 0.51
RPUSD3-214ENST00000473522 A0A1B0GVM2 712 aa18.25■□□□□ 0.51
RPUSD3-214ENST00000473522 SSU72P8A0A1W2PR75 194 aa18.25■□□□□ 0.51
RPUSD3-214ENST00000473522 TCAF2A6NFQ2 919 aa18.25■□□□□ 0.51
RPUSD3-214ENST00000473522 H0Y626 953 aa18.25■□□□□ 0.51
RPUSD3-214ENST00000473522 CLDN11O75508 207 aa18.25■□□□□ 0.51
RPUSD3-214ENST00000473522 TPM1P09493 284 aa18.25■□□□□ 0.51
RPUSD3-214ENST00000473522 EIF4A3P38919 411 aaKnown RBP18.25■□□□□ 0.51
RPUSD3-214ENST00000473522 OXCT1P55809 520 aa18.25■□□□□ 0.51
RPUSD3-214ENST00000473522 OGDHQ02218 1023 aa18.25■□□□□ 0.51
RPUSD3-214ENST00000473522 ARL13BQ3SXY8 428 aa18.25■□□□□ 0.51
RPUSD3-214ENST00000473522 MBLAC2Q68D91 279 aa18.25■□□□□ 0.51
RPUSD3-214ENST00000473522 CCDC117Q8IWD4 279 aaPredicted RBP18.25■□□□□ 0.51
RPUSD3-214ENST00000473522 TSTD1Q8NFU3 115 aa18.25■□□□□ 0.51
RPUSD3-214ENST00000473522 MRFAP1L1Q96HT8 127 aa18.25■□□□□ 0.51
RPUSD3-214ENST00000473522 HHIPQ96QV1 700 aa18.25■□□□□ 0.51
RPUSD3-214ENST00000473522 MRPL47Q9HD33 250 aaKnown RBP18.25■□□□□ 0.51
RPUSD3-214ENST00000473522 POLMQ9NP87 494 aaPredicted RBP18.25■□□□□ 0.51
RPUSD3-214ENST00000473522 ABHD10Q9NUJ1 306 aa18.25■□□□□ 0.51
RPUSD3-214ENST00000473522 STON1Q9Y6Q2 735 aa18.25■□□□□ 0.51
RPUSD3-214ENST00000473522 WASH3PC4AMC7 463 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 AXIN1O15169 862 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 MFAP3LO75121 409 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 ATP5BP06576 529 aaKnown RBP18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 DLDP09622 509 aaKnown RBP18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 C7P10643 843 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 PXNP49023 591 aaPredicted RBP18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 ADKP55263 362 aaKnown RBP18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 CDH4P55283 916 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 SCAPQ12770 1279 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 CDH18Q13634 790 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 ZNF234Q14588 700 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 SLC18A3Q16572 532 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 PTPRNQ16849 979 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 CDO1Q16878 200 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 TSR1Q2NL82 804 aaKnown RBP18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 CXorf57Q6NSI4 855 aaKnown RBP18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 LRRC31Q6UY01 552 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 CNGA4Q8IV77 575 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 KDM1BQ8NB78 822 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 SORCS1Q8WY21 1168 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 ALG14Q96F25 216 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 CIPCQ9C0C6 399 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 EPC1Q9H2F5 836 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 RETREG1Q9H6L5 497 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 ZNHIT6Q9NWK9 470 aaKnown RBP18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 PPARGC1AQ9UBK2 798 aaKnown RBP18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 PLA2G4CQ9UP65 541 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 SNX10Q9Y5X0 201 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 SCINQ9Y6U3 715 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 DMDP11532 3685 aa18.24■□□□□ 0.51
RPUSD3-214ENST00000473522 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms