RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 CST6Q15828 149 aa13.11□□□□□ -0.31
TRAF4-209ENST00000473421 HNRNPA1L2Q32P51 320 aaKnown RBP13.11□□□□□ -0.31
TRAF4-209ENST00000473421 USP30Q70CQ3 517 aa13.11□□□□□ -0.31
TRAF4-209ENST00000473421 CEP57L1Q8IYX8 460 aa13.11□□□□□ -0.31
TRAF4-209ENST00000473421 CFAP52Q8N1V2 620 aa13.11□□□□□ -0.31
TRAF4-209ENST00000473421 TFAP2BQ92481 460 aa13.11□□□□□ -0.31
TRAF4-209ENST00000473421 TTC17Q96AE7 1141 aa13.11□□□□□ -0.31
TRAF4-209ENST00000473421 NXPE2Q96DL1 559 aa13.11□□□□□ -0.31
TRAF4-209ENST00000473421 AASDHPPTQ9NRN7 309 aa13.11□□□□□ -0.31
TRAF4-209ENST00000473421 FAM13BQ9NYF5 915 aa13.11□□□□□ -0.31
TRAF4-209ENST00000473421 XPO7Q9UIA9 1087 aaKnown RBP13.11□□□□□ -0.31
TRAF4-209ENST00000473421 CA5BQ9Y2D0 317 aa13.11□□□□□ -0.31
TRAF4-209ENST00000473421 E9PAM4 449 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 MAPK13O15264 365 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 CALUO43852 315 aaPredicted RBP13.1□□□□□ -0.31
TRAF4-209ENST00000473421 RNASEH2AO75792 299 aaKnown RBP13.1□□□□□ -0.31
TRAF4-209ENST00000473421 FYNP06241 537 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 ATP5BP06576 529 aaKnown RBP13.1□□□□□ -0.31
TRAF4-209ENST00000473421 KRT10P13645 584 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 ABCB4P21439 1286 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 CD38P28907 300 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 EPHA8P29322 1005 aaPredicted RBP13.1□□□□□ -0.31
TRAF4-209ENST00000473421 SLC8A1P32418 973 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 NXPH1P58417 271 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 DAOAP59103 153 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 TLE3Q04726 772 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 DNM1Q05193 864 aaKnown RBP13.1□□□□□ -0.31
TRAF4-209ENST00000473421 CCDC173Q0VFZ6 552 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 TTC31Q49AM3 519 aaPredicted RBP13.1□□□□□ -0.31
TRAF4-209ENST00000473421 CBWD6Q4V339 395 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 PKDCCQ504Y2 493 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 ZCWPW2Q504Y3 356 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 CBWD3Q5JTY5 395 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 CBWD5Q5RIA9 395 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 C6orf118Q5T5N4 469 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 SFMBT2Q5VUG0 894 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 KRT39Q6A163 491 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 INTS8Q75QN2 995 aaKnown RBP13.1□□□□□ -0.31
TRAF4-209ENST00000473421 ERICH1Q86X53 443 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 APCDD1Q8J025 514 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 STK40Q8N2I9 435 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 RPL10LQ96L21 214 aaKnown RBP13.1□□□□□ -0.31
TRAF4-209ENST00000473421 LRRC4Q9HBW1 653 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 RAB20Q9NX57 234 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 SUN2Q9UH99 717 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 RCOR1Q9UKL0 485 aa13.1□□□□□ -0.31
TRAF4-209ENST00000473421 K7ELQ4 463 aaPredicted RBP13.09□□□□□ -0.31
TRAF4-209ENST00000473421 TK2O00142 265 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 TLR4O00206 839 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 O00370 1275 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 TRIM38O00635 465 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 ACSL4O60488 711 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 SDC3O75056 442 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 MYF5P13349 255 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 PFKFB1P16118 471 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 PSMC2P35998 433 aaKnown RBP13.09□□□□□ -0.31
TRAF4-209ENST00000473421 PSMD8P48556 350 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 STK19P49842 368 aaPredicted RBP13.09□□□□□ -0.31
TRAF4-209ENST00000473421 ADPRHP54922 357 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 INSM1Q01101 510 aaPredicted RBP13.09□□□□□ -0.31
TRAF4-209ENST00000473421 ADAM9Q13443 819 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 NFIL3Q16649 462 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 PMF1Q6P1K2 205 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 MSANTD2Q6P1R3 559 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 MFN1Q8IWA4 741 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 SMYD4Q8IYR2 804 aaPredicted RBP13.09□□□□□ -0.31
TRAF4-209ENST00000473421 UBR7Q8N806 425 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 OR2T34Q8NGX1 318 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 SNIP1Q8TAD8 396 aaKnown RBP13.09□□□□□ -0.31
TRAF4-209ENST00000473421 FIBINQ8TAL6 211 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 RNF139Q8WU17 664 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 NAF1Q96HR8 494 aaKnown RBP13.09□□□□□ -0.31
TRAF4-209ENST00000473421 SERAC1Q96JX3 654 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 FCRL2Q96LA5 508 aaPredicted RBP13.09□□□□□ -0.31
TRAF4-209ENST00000473421 IPO9Q96P70 1041 aaKnown RBP13.09□□□□□ -0.31
TRAF4-209ENST00000473421 SEMA4CQ9C0C4 833 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 NRSN2Q9GZP1 204 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 NUCKS1Q9H1E3 243 aaKnown RBP13.09□□□□□ -0.31
TRAF4-209ENST00000473421 FBRSQ9HAH7 460 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 OLA1Q9NTK5 396 aaKnown RBP13.09□□□□□ -0.31
TRAF4-209ENST00000473421 ARHGAP20Q9P2F6 1191 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 ADAMTS1Q9UHI8 967 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 ERVW-1Q9UQF0 538 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 NCKAP1Q9Y2A7 1128 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 PCDHB1Q9Y5F3 818 aa13.09□□□□□ -0.31
TRAF4-209ENST00000473421 NYNRINQ9P2P1 1898 aaKnown RBP13.08□□□□□ -0.32
TRAF4-209ENST00000473421 RNF225M0QZC1 329 aaPredicted RBP13.08□□□□□ -0.32
TRAF4-209ENST00000473421 DFNA5O60443 496 aa13.08□□□□□ -0.32
TRAF4-209ENST00000473421 RTN2O75298 545 aa13.08□□□□□ -0.32
TRAF4-209ENST00000473421 LATS1O95835 1130 aa13.08□□□□□ -0.32
TRAF4-209ENST00000473421 F13A1P00488 732 aa13.08□□□□□ -0.32
TRAF4-209ENST00000473421 ZSCAN22P10073 491 aaPredicted RBP13.08□□□□□ -0.32
TRAF4-209ENST00000473421 KRT13P13646 458 aa13.08□□□□□ -0.32
TRAF4-209ENST00000473421 TRIM21P19474 475 aaKnown RBP13.08□□□□□ -0.32
TRAF4-209ENST00000473421 MAT2AP31153 395 aaKnown RBP13.08□□□□□ -0.32
TRAF4-209ENST00000473421 DRD3P35462 400 aa13.08□□□□□ -0.32
TRAF4-209ENST00000473421 HNF1BP35680 557 aa13.08□□□□□ -0.32
TRAF4-209ENST00000473421 BST2Q10589 180 aaKnown RBP13.08□□□□□ -0.32
TRAF4-209ENST00000473421 E2F5Q15329 346 aa13.08□□□□□ -0.32
TRAF4-209ENST00000473421 PITRM1Q5JRX3 1037 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms