RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 KDSRQ06136 332 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 SIGLEC14Q08ET2 396 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 WASHC5Q12768 1159 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 NCOA4Q13772 614 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 ZNF423Q2M1K9 1284 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 MAP7D1Q3KQU3 841 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 GRAMD1BQ3KR37 738 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 CCDC153Q494R4 210 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 RARS2Q5T160 578 aaKnown RBP10.38□□□□□ -0.75
APTX-216ENST00000472896 RBM23Q86U06 439 aaKnown RBP10.38□□□□□ -0.75
APTX-216ENST00000472896 RTN4RL1Q86UN2 441 aaPredicted RBP10.38□□□□□ -0.75
APTX-216ENST00000472896 CATSPER3Q86XQ3 398 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 RHOT1Q8IXI2 618 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 KATNAL2Q8IYT4 538 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 CCDC33Q8N5R6 958 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 EFHBQ8N7U6 833 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 TTC13Q8NBP0 860 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 ADCY4Q8NFM4 1077 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 EXD1Q8NHP7 514 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 PAFAH2Q99487 392 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 CGREF1Q99674 301 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 RUSC1Q9BVN2 902 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 EHMT1Q9H9B1 1298 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 BCAP29Q9UHQ4 241 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 EFR3BQ9Y2G0 817 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 MRPL42Q9Y6G3 142 aaKnown RBP10.38□□□□□ -0.75
APTX-216ENST00000472896 CACNA1HO95180 2353 aa10.38□□□□□ -0.75
APTX-216ENST00000472896 SF3B1O75533 1304 aaKnown RBP eCLIP10.38□□□□□ -0.75
APTX-216ENST00000472896 PNMA6FA0A0J9YX94 578 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 ZNF701M0R085 212 aaPredicted RBP10.37□□□□□ -0.75
APTX-216ENST00000472896 LIASO43766 372 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 DGKIO75912 1065 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 FAM13AO94988 1023 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 CRTAMO95727 393 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 RALAP11233 206 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 ZNF23P17027 643 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 NRIP1P48552 1158 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 FMO1Q01740 532 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 PFKPQ01813 784 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 PGM5Q15124 567 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 RNASEH2BQ5TBB1 312 aaKnown RBP10.37□□□□□ -0.75
APTX-216ENST00000472896 ZNF746Q6NUN9 644 aaPredicted RBP10.37□□□□□ -0.75
APTX-216ENST00000472896 ZFP1Q6P2D0 407 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 POTEGQ6S5H5 508 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 TRIM50Q86XT4 487 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 CRLF3Q8IUI8 442 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 PQLC1Q8N2U9 271 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 FBXO27Q8NI29 283 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 GIPC3Q8TF64 312 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 TMEM174Q8WUU8 243 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 DCAKDQ8WVC6 231 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 BORCS5Q969J3 196 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 GCNAQ96QF7 691 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 RRN3Q9NYV6 651 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 ANAPC7Q9UJX3 599 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 INPP5FQ9Y2H2 1132 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 RWDD3Q9Y3V2 267 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 TTC3P53804 2025 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 USP34Q70CQ2 3546 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 SOBPA7XYQ1 873 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 H0YJX3 145 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 ATMINO43313 823 aaPredicted RBP10.37□□□□□ -0.75
APTX-216ENST00000472896 SRGAP2CP0DJJ0 459 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 SRGAP2BP0DMP2 458 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 TGFB3P10600 412 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 MYL4P12829 197 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 PCSK6P29122 969 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 PRDX6P30041 224 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 HMOX2P30519 316 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 SERPINB6P35237 376 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 PHKA2P46019 1235 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 ALDH3B2P48448 385 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 MFAP3P55082 362 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 GPX6P59796 221 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 TUBA4AP68366 448 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 MYBPC1Q00872 1141 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 FOXK2Q01167 660 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 GHRHRQ02643 423 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 MGAT3Q09327 533 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 CNGA3Q16281 694 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 LRRC36Q1X8D7 754 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 KBTBD6Q86V97 674 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 CPNE8Q86YQ8 564 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 ARHGEF19Q8IW93 802 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 CRIPAKQ8N1N5 446 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 SLC25A41Q8N5S1 370 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 VN1R2Q8NFZ6 395 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 LINC01599Q8WXQ3 324 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 TTC17Q96AE7 1141 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 KCNK16Q96T55 309 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 PHF7Q9BWX1 381 aaPredicted RBP10.37□□□□□ -0.75
APTX-216ENST00000472896 CCDC68Q9H2F9 335 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 PCDH9Q9HC56 1237 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 PALMDQ9NP74 551 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 VPS45Q9NRW7 570 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 AGPAT3Q9NRZ7 376 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 MKS1Q9NXB0 559 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 UTP6Q9NYH9 597 aaKnown RBP10.37□□□□□ -0.75
APTX-216ENST00000472896 IGSF9Q9P2J2 1179 aa10.37□□□□□ -0.75
APTX-216ENST00000472896 CROTQ9UKG9 612 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms