RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 CDCP2Q5VXM1 449 aa19.76■□□□□ 0.75
SORT1-203ENST00000471996 PM20D1Q6GTS8 502 aa19.76■□□□□ 0.75
SORT1-203ENST00000471996 NAPEPLDQ6IQ20 393 aa19.76■□□□□ 0.75
SORT1-203ENST00000471996 SND1Q7KZF4 910 aaKnown RBP eCLIP19.76■□□□□ 0.752e-6■■■■□ 25.2
SORT1-203ENST00000471996 LURAP1LQ8IV03 231 aa19.76■□□□□ 0.75
SORT1-203ENST00000471996 SLC9A9Q8IVB4 645 aa19.76■□□□□ 0.75
SORT1-203ENST00000471996 OR14C36Q8NHC7 312 aa19.76■□□□□ 0.75
SORT1-203ENST00000471996 TMC2Q8TDI7 906 aa19.76■□□□□ 0.75
SORT1-203ENST00000471996 TMEM174Q8WUU8 243 aa19.76■□□□□ 0.75
SORT1-203ENST00000471996 DHX58Q96C10 678 aa19.76■□□□□ 0.75
SORT1-203ENST00000471996 LMLNQ96KR4 655 aa19.76■□□□□ 0.75
SORT1-203ENST00000471996 SFMBT1Q9UHJ3 866 aa19.76■□□□□ 0.75
SORT1-203ENST00000471996 TP53BP1Q12888 1972 aaPredicted RBP19.75■□□□□ 0.75
SORT1-203ENST00000471996 LATO43561 262 aa19.75■□□□□ 0.75
SORT1-203ENST00000471996 TBL1XO60907 577 aa19.75■□□□□ 0.75
SORT1-203ENST00000471996 SDC3O75056 442 aa19.75■□□□□ 0.75
SORT1-203ENST00000471996 ZBED1O96006 694 aa19.75■□□□□ 0.75
SORT1-203ENST00000471996 ASLP04424 464 aa19.75■□□□□ 0.75
SORT1-203ENST00000471996 GOT1P17174 413 aa19.75■□□□□ 0.75
SORT1-203ENST00000471996 LSSP48449 732 aa19.75■□□□□ 0.75
SORT1-203ENST00000471996 CSRP3P50461 194 aa19.75■□□□□ 0.75
SORT1-203ENST00000471996 TKTL1P51854 596 aa19.75■□□□□ 0.75
SORT1-203ENST00000471996 SRSF1Q07955 248 aaKnown RBP eCLIP19.75■□□□□ 0.75
SORT1-203ENST00000471996 C1orf220Q5T0J3 134 aa19.75■□□□□ 0.75
SORT1-203ENST00000471996 BHLHA9Q7RTU4 235 aa19.75■□□□□ 0.75
SORT1-203ENST00000471996 IQCHQ86VS3 1027 aa19.75■□□□□ 0.75
SORT1-203ENST00000471996 AADATQ8N5Z0 425 aa19.75■□□□□ 0.75
SORT1-203ENST00000471996 ZNF557Q8N988 423 aaPredicted RBP19.75■□□□□ 0.75
SORT1-203ENST00000471996 KDM1BQ8NB78 822 aa19.75■□□□□ 0.75
SORT1-203ENST00000471996 MRGPRX3Q96LB0 322 aa19.75■□□□□ 0.75
SORT1-203ENST00000471996 HEXIM2Q96MH2 286 aaKnown RBP19.75■□□□□ 0.75
SORT1-203ENST00000471996 IRX2Q9BZI1 471 aaPredicted RBP19.75■□□□□ 0.75
SORT1-203ENST00000471996 IMPG2Q9BZV3 1241 aa19.75■□□□□ 0.75
SORT1-203ENST00000471996 SSUH2Q9Y2M2 353 aa19.75■□□□□ 0.75
SORT1-203ENST00000471996 TARSL2A2RTX5 802 aaKnown RBP19.74■□□□□ 0.75
SORT1-203ENST00000471996 MAGEC1O60732 1142 aa19.74■□□□□ 0.75
SORT1-203ENST00000471996 USP12O75317 370 aa19.74■□□□□ 0.75
SORT1-203ENST00000471996 PPP2CBP62714 309 aa19.74■□□□□ 0.75
SORT1-203ENST00000471996 PPP2CAP67775 309 aa19.74■□□□□ 0.75
SORT1-203ENST00000471996 DAB2P98082 770 aa19.74■□□□□ 0.75
SORT1-203ENST00000471996 OVGP1Q12889 678 aa19.74■□□□□ 0.75
SORT1-203ENST00000471996 ZNF394Q53GI3 561 aa19.74■□□□□ 0.75
SORT1-203ENST00000471996 PIK3R6Q5UE93 754 aa19.74■□□□□ 0.75
SORT1-203ENST00000471996 SLC25A45Q8N413 288 aa19.74■□□□□ 0.75
SORT1-203ENST00000471996 IQUBQ8NA54 791 aa19.74■□□□□ 0.75
SORT1-203ENST00000471996 RNF139Q8WU17 664 aa19.74■□□□□ 0.75
SORT1-203ENST00000471996 NDRG1Q92597 394 aaKnown RBP19.74■□□□□ 0.75
SORT1-203ENST00000471996 DEPDC7Q96QD5 511 aa19.74■□□□□ 0.75
SORT1-203ENST00000471996 FAM129BQ96TA1 746 aa19.74■□□□□ 0.75
SORT1-203ENST00000471996 ULBP1Q9BZM6 244 aa19.74■□□□□ 0.75
SORT1-203ENST00000471996 NIF3L1Q9GZT8 377 aa19.74■□□□□ 0.75
SORT1-203ENST00000471996 POLR1BQ9H9Y6 1135 aa19.74■□□□□ 0.75
SORT1-203ENST00000471996 ASCL3Q9NQ33 180 aa19.74■□□□□ 0.75
SORT1-203ENST00000471996 INTS6Q9UL03 887 aaKnown RBP19.74■□□□□ 0.75
SORT1-203ENST00000471996 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.73■□□□□ 0.75
SORT1-203ENST00000471996 OPA1O60313 960 aa19.73■□□□□ 0.75
SORT1-203ENST00000471996 PDCP20941 246 aa19.73■□□□□ 0.75
SORT1-203ENST00000471996 C5AR1P21730 350 aa19.73■□□□□ 0.75
SORT1-203ENST00000471996 CASP1P29466 404 aa19.73■□□□□ 0.75
SORT1-203ENST00000471996 CSKP41240 450 aa19.73■□□□□ 0.75
SORT1-203ENST00000471996 PSMD8P48556 350 aa19.73■□□□□ 0.75
SORT1-203ENST00000471996 RFWD3Q6PCD5 774 aa19.73■□□□□ 0.75
SORT1-203ENST00000471996 PRPF39Q86UA1 669 aaKnown RBP19.73■□□□□ 0.75
SORT1-203ENST00000471996 MFN1Q8IWA4 741 aa19.73■□□□□ 0.75
SORT1-203ENST00000471996 FIBINQ8TAL6 211 aa19.73■□□□□ 0.75
SORT1-203ENST00000471996 VCPIP1Q96JH7 1222 aa19.73■□□□□ 0.75
SORT1-203ENST00000471996 BLZF1Q9H2G9 400 aa19.73■□□□□ 0.75
SORT1-203ENST00000471996 THSD1Q9NS62 852 aa19.73■□□□□ 0.75
SORT1-203ENST00000471996 ARHGAP20Q9P2F6 1191 aa19.73■□□□□ 0.75
SORT1-203ENST00000471996 ARID1BQ8NFD5 2236 aaPredicted RBP19.73■□□□□ 0.75
SORT1-203ENST00000471996 TBC1D3DA0A087WVF3 549 aa19.72■□□□□ 0.75
SORT1-203ENST00000471996 TBC1D3IA0A087WXS9 549 aa19.72■□□□□ 0.75
SORT1-203ENST00000471996 TBC1D3EA0A087X179 549 aa19.72■□□□□ 0.75
SORT1-203ENST00000471996 TBC1D3KA0A087X1G2 549 aa19.72■□□□□ 0.75
SORT1-203ENST00000471996 EDDM13A0A1B0GTR0 161 aa19.72■□□□□ 0.75
SORT1-203ENST00000471996 PVALEFA0A1B0GWK0 134 aa19.72■□□□□ 0.75
SORT1-203ENST00000471996 TBC1D3FA6NER0 549 aaPredicted RBP19.72■□□□□ 0.75
SORT1-203ENST00000471996 TBC1D3LB9A6J9 549 aa19.72■□□□□ 0.75
SORT1-203ENST00000471996 IRAK2O43187 625 aa19.72■□□□□ 0.75
SORT1-203ENST00000471996 ADH1BP00325 375 aa19.72■□□□□ 0.75
SORT1-203ENST00000471996 TBC1D3HP0C7X1 549 aa19.72■□□□□ 0.75
SORT1-203ENST00000471996 BSPRYQ5W0U4 402 aa19.72■□□□□ 0.75
SORT1-203ENST00000471996 TBC1D3GQ6DHY5 549 aa19.72■□□□□ 0.75
SORT1-203ENST00000471996 TBC1D3CQ6IPX1 549 aa19.72■□□□□ 0.75
SORT1-203ENST00000471996 TBC1D3Q8IZP1 549 aaPredicted RBP19.72■□□□□ 0.75
SORT1-203ENST00000471996 ANKRD52Q8NB46 1076 aa19.72■□□□□ 0.75
SORT1-203ENST00000471996 OR4C6Q8NH72 309 aa19.72■□□□□ 0.75
SORT1-203ENST00000471996 EDEM1Q92611 657 aa19.72■□□□□ 0.75
SORT1-203ENST00000471996 GOLGA6L7A0A1B0GV03 622 aa19.71■□□□□ 0.75
SORT1-203ENST00000471996 TTC34A8MYJ7 566 aa19.71■□□□□ 0.75
SORT1-203ENST00000471996 K7ENP7 123 aa19.71■□□□□ 0.75
SORT1-203ENST00000471996 MSI1O43347 362 aaKnown RBP19.71■□□□□ 0.75
SORT1-203ENST00000471996 CSO75390 466 aaKnown RBP19.71■□□□□ 0.75
SORT1-203ENST00000471996 SRPRAP08240 638 aaKnown RBP19.71■□□□□ 0.75
SORT1-203ENST00000471996 KRT10P13645 584 aa19.71■□□□□ 0.75
SORT1-203ENST00000471996 SLC6A4P31645 630 aa19.71■□□□□ 0.75
SORT1-203ENST00000471996 NUDT1P36639 197 aa19.71■□□□□ 0.75
SORT1-203ENST00000471996 NASPP49321 788 aaPredicted RBP19.71■□□□□ 0.75
SORT1-203ENST00000471996 SLC8A3P57103 927 aa19.71■□□□□ 0.75
SORT1-203ENST00000471996 HS1BP3Q53T59 392 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms