RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 CHSY1Q86X52 802 aa23.34■■□□□ 1.33
C9orf3-213ENST00000471978 SHC3Q92529 594 aa23.34■■□□□ 1.33
C9orf3-213ENST00000471978 SNX19Q92543 992 aa23.34■■□□□ 1.33
C9orf3-213ENST00000471978 MYO19Q96H55 970 aa23.34■■□□□ 1.33
C9orf3-213ENST00000471978 BTN2A3PQ96KV6 586 aa23.34■■□□□ 1.33
C9orf3-213ENST00000471978 SCNM1Q9BWG6 230 aa23.34■■□□□ 1.33
C9orf3-213ENST00000471978 MTG2Q9H4K7 406 aa23.34■■□□□ 1.33
C9orf3-213ENST00000471978 TJP2Q9UDY2 1190 aa23.34■■□□□ 1.33
C9orf3-213ENST00000471978 H0Y626 953 aa23.33■■□□□ 1.33
C9orf3-213ENST00000471978 IGLV3-25P01717 112 aa23.33■■□□□ 1.33
C9orf3-213ENST00000471978 TACR2P21452 398 aa23.33■■□□□ 1.33
C9orf3-213ENST00000471978 PITX1P78337 314 aaPredicted RBP23.33■■□□□ 1.33
C9orf3-213ENST00000471978 TTC31Q49AM3 519 aaPredicted RBP23.33■■□□□ 1.33
C9orf3-213ENST00000471978 PITRM1Q5JRX3 1037 aa23.33■■□□□ 1.33
C9orf3-213ENST00000471978 ZNF776Q68DI1 518 aaPredicted RBP23.33■■□□□ 1.33
C9orf3-213ENST00000471978 PASD1Q8IV76 773 aa23.33■■□□□ 1.33
C9orf3-213ENST00000471978 WDTC1Q8N5D0 677 aa23.33■■□□□ 1.33
C9orf3-213ENST00000471978 PPP1R13BQ96KQ4 1090 aa23.33■■□□□ 1.33
C9orf3-213ENST00000471978 CPXM1Q96SM3 734 aa23.33■■□□□ 1.33
C9orf3-213ENST00000471978 BTBD1Q9H0C5 482 aa23.33■■□□□ 1.33
C9orf3-213ENST00000471978 ZFHX4Q86UP3 3567 aa23.32■■□□□ 1.32
C9orf3-213ENST00000471978 C1QTNF9BB2RNN3 333 aa23.32■■□□□ 1.32
C9orf3-213ENST00000471978 SH3BP5O60239 455 aa23.32■■□□□ 1.32
C9orf3-213ENST00000471978 MOCS3O95396 460 aa23.32■■□□□ 1.32
C9orf3-213ENST00000471978 SEMA4FO95754 770 aa23.32■■□□□ 1.32
C9orf3-213ENST00000471978 PROS1P07225 676 aa23.32■■□□□ 1.32
C9orf3-213ENST00000471978 C1QTNF9P0C862 333 aa23.32■■□□□ 1.32
C9orf3-213ENST00000471978 FAM193AP78312 1265 aa23.32■■□□□ 1.32
C9orf3-213ENST00000471978 HNRNPDQ14103 355 aaKnown RBP23.32■■□□□ 1.32
C9orf3-213ENST00000471978 UNQ6494/PRO21346Q6UXR6 183 aa23.32■■□□□ 1.32
C9orf3-213ENST00000471978 ATP6V0D2Q8N8Y2 350 aa23.32■■□□□ 1.32
C9orf3-213ENST00000471978 C1orf216Q8TAB5 229 aa23.32■■□□□ 1.32
C9orf3-213ENST00000471978 MRGPRX3Q96LB0 322 aa23.32■■□□□ 1.32
C9orf3-213ENST00000471978 CAMK1GQ96NX5 476 aa23.32■■□□□ 1.32
C9orf3-213ENST00000471978 ADAM33Q9BZ11 813 aa23.32■■□□□ 1.32
C9orf3-213ENST00000471978 RSPH9Q9H1X1 276 aaPredicted RBP23.32■■□□□ 1.32
C9orf3-213ENST00000471978 FAM204AQ9H8W3 233 aa23.32■■□□□ 1.32
C9orf3-213ENST00000471978 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.32■■□□□ 1.32
C9orf3-213ENST00000471978 CHMP5Q9NZZ3 219 aa23.32■■□□□ 1.32
C9orf3-213ENST00000471978 KIAA1522Q9P206 1035 aaPredicted RBP23.32■■□□□ 1.32
C9orf3-213ENST00000471978 SLC12A6Q9UHW9 1150 aa23.32■■□□□ 1.32
C9orf3-213ENST00000471978 PCDHGC3Q9UN70 934 aa23.32■■□□□ 1.32
C9orf3-213ENST00000471978 CFAP47Q6ZTR5 3102 aa23.31■■□□□ 1.32
C9orf3-213ENST00000471978 KCNU1A8MYU2 1149 aa23.31■■□□□ 1.32
C9orf3-213ENST00000471978 GLI1P08151 1106 aa23.31■■□□□ 1.32
C9orf3-213ENST00000471978 CDK17Q00537 523 aa23.31■■□□□ 1.32
C9orf3-213ENST00000471978 PTK2Q05397 1052 aa23.31■■□□□ 1.32
C9orf3-213ENST00000471978 EIF4EBP2Q13542 120 aaPredicted RBP23.31■■□□□ 1.32
C9orf3-213ENST00000471978 HNRNPA1L2Q32P51 320 aaKnown RBP23.31■■□□□ 1.32
C9orf3-213ENST00000471978 DEFB106AQ8N104 65 aa23.31■■□□□ 1.32
C9orf3-213ENST00000471978 KDM1BQ8NB78 822 aa23.31■■□□□ 1.32
C9orf3-213ENST00000471978 SIX2Q9NPC8 291 aa23.31■■□□□ 1.32
C9orf3-213ENST00000471978 DNAJC12Q9UKB3 198 aa23.31■■□□□ 1.32
C9orf3-213ENST00000471978 AJAP1Q9UKB5 411 aaPredicted RBP23.31■■□□□ 1.32
C9orf3-213ENST00000471978 ERVW-1Q9UQF0 538 aa23.31■■□□□ 1.32
C9orf3-213ENST00000471978 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.31■■□□□ 1.32
C9orf3-213ENST00000471978 CEP83Q9Y592 693 aa23.31■■□□□ 1.32
C9orf3-213ENST00000471978 NUMA1Q14980 2115 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 ZZEF1O43149 2961 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 WDFY3Q8IZQ1 3526 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 IGF2RP11717 2491 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 SYNJ2BP-COX16A0A087WUM0 186 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 F5H5T6 163 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 HYAL3O43820 417 aaPredicted RBP23.3■■□□□ 1.32
C9orf3-213ENST00000471978 RNASEH1O60930 286 aaKnown RBP23.3■■□□□ 1.32
C9orf3-213ENST00000471978 SIN3BO75182 1162 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 SRPRAP08240 638 aaKnown RBP23.3■■□□□ 1.32
C9orf3-213ENST00000471978 SLC2A3P11169 496 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 RDXP35241 583 aaKnown RBP23.3■■□□□ 1.32
C9orf3-213ENST00000471978 CTSOP43234 321 aaPredicted RBP23.3■■□□□ 1.32
C9orf3-213ENST00000471978 BNC1Q01954 994 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 MAN2A1Q16706 1144 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 EFHC1Q5JVL4 640 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 IL27RAQ6UWB1 636 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 NAXDQ8IW45 347 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 DHX40Q8IX18 779 aaKnown RBP23.3■■□□□ 1.32
C9orf3-213ENST00000471978 GANCQ8TET4 914 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 RNF34Q969K3 372 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 NOX5Q96PH1 765 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 SLC2A13Q96QE2 648 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 CLSTN2Q9H4D0 955 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 GAREM1Q9H706 876 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 SGK2Q9HBY8 427 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 ASNSD1Q9NWL6 643 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 DDIT4Q9NX09 232 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 COX16Q9P0S2 106 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 SCML1Q9UN30 329 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 NCKAP1Q9Y2A7 1128 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 PCDHB9Q9Y5E1 797 aa23.3■■□□□ 1.32
C9orf3-213ENST00000471978 HSF2BPO75031 334 aa23.29■■□□□ 1.32
C9orf3-213ENST00000471978 GRAP2O75791 330 aa23.29■■□□□ 1.32
C9orf3-213ENST00000471978 FSBPO95073 299 aa23.29■■□□□ 1.32
C9orf3-213ENST00000471978 CER1O95813 267 aa23.29■■□□□ 1.32
C9orf3-213ENST00000471978 ABCB4P21439 1286 aa23.29■■□□□ 1.32
C9orf3-213ENST00000471978 CCR1P32246 355 aa23.29■■□□□ 1.32
C9orf3-213ENST00000471978 KRT9P35527 623 aa23.29■■□□□ 1.32
C9orf3-213ENST00000471978 MATKP42679 507 aa23.29■■□□□ 1.32
C9orf3-213ENST00000471978 CSNK1EP49674 416 aaKnown RBP23.29■■□□□ 1.32
C9orf3-213ENST00000471978 AFF3P51826 1226 aaKnown RBP23.29■■□□□ 1.32
C9orf3-213ENST00000471978 ECT2LQ008S8 904 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms