RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 C4orf22Q6V702 233 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 GET4Q7L5D6 327 aaPredicted RBP18.05■□□□□ 0.48
HSPG2-208ENST00000471322 CDKL3Q8IVW4 592 aaPredicted RBP18.05■□□□□ 0.48
HSPG2-208ENST00000471322 NUP93Q8N1F7 819 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 ZCCHC9Q8N567 271 aaKnown RBP18.05■□□□□ 0.48
HSPG2-208ENST00000471322 GIPC2Q8TF65 315 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 NECTIN4Q96NY8 510 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 WDR6Q9NNW5 1121 aaKnown RBP18.05■□□□□ 0.48
HSPG2-208ENST00000471322 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.05■□□□□ 0.48
HSPG2-208ENST00000471322 NFS1Q9Y697 457 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 CLUHO75153 1309 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 SYNJ2BP-COX16A0A087WUM0 186 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 BCLAF3A2AJT9 711 aaKnown RBP18.04■□□□□ 0.48
HSPG2-208ENST00000471322 HOXA9P31269 272 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 ALDH1A3P47895 512 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 HCAR3P49019 387 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 PITX1P78337 314 aaPredicted RBP18.04■□□□□ 0.48
HSPG2-208ENST00000471322 DDR2Q16832 855 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 BTBD8Q5XKL5 378 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 NPNTQ6UXI9 565 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 MON1AQ86VX9 555 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 RELL1Q8IUW5 271 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 HS6ST3Q8IZP7 471 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 SCAMP5Q8TAC9 235 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 SPPL2BQ8TCT7 592 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 RNF139Q8WU17 664 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 WDCPQ9H6R7 721 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 COMMD8Q9NX08 183 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 COX16Q9P0S2 106 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 VPS18Q9P253 973 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 SHOC2Q9UQ13 582 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 SCML2Q9UQR0 700 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 HEY1Q9Y5J3 304 aa18.04■□□□□ 0.48
HSPG2-208ENST00000471322 C2CD4DB7Z1M9 353 aa18.03■□□□□ 0.48
HSPG2-208ENST00000471322 NRG2O14511 850 aaPredicted RBP18.03■□□□□ 0.48
HSPG2-208ENST00000471322 RHOP08100 348 aa18.03■□□□□ 0.48
HSPG2-208ENST00000471322 MYZAPP0CAP1 466 aa18.03■□□□□ 0.48
HSPG2-208ENST00000471322 ZSCAN5DPP0CG00 497 aa18.03■□□□□ 0.48
HSPG2-208ENST00000471322 ATF6P18850 670 aa18.03■□□□□ 0.48
HSPG2-208ENST00000471322 IFFO1Q0D2I5 559 aa18.03■□□□□ 0.48
HSPG2-208ENST00000471322 PABPC1LQ4VXU2 614 aaKnown RBP18.03■□□□□ 0.48
HSPG2-208ENST00000471322 CEP85LQ5SZL2 805 aa18.03■□□□□ 0.48
HSPG2-208ENST00000471322 PDZD4Q76G19 769 aaPredicted RBP18.03■□□□□ 0.48
HSPG2-208ENST00000471322 ZC3H18Q86VM9 953 aaKnown RBP18.03■□□□□ 0.48
HSPG2-208ENST00000471322 HOOK3Q86VS8 718 aa18.03■□□□□ 0.48
HSPG2-208ENST00000471322 CCDC25Q86WR0 208 aa18.03■□□□□ 0.48
HSPG2-208ENST00000471322 FAM71DQ8N9W8 422 aa18.03■□□□□ 0.48
HSPG2-208ENST00000471322 ITFG1Q8TB96 612 aa18.03■□□□□ 0.48
HSPG2-208ENST00000471322 ING5Q8WYH8 240 aa18.03■□□□□ 0.48
HSPG2-208ENST00000471322 EDEM1Q92611 657 aa18.03■□□□□ 0.48
HSPG2-208ENST00000471322 RTP4Q96DX8 246 aa18.03■□□□□ 0.48
HSPG2-208ENST00000471322 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.02■□□□□ 0.48
HSPG2-208ENST00000471322 HACD1B0YJ81 288 aa18.02■□□□□ 0.48
HSPG2-208ENST00000471322 HAPLN1P10915 354 aaPredicted RBP18.02■□□□□ 0.48
HSPG2-208ENST00000471322 ETS1P14921 441 aa18.02■□□□□ 0.48
HSPG2-208ENST00000471322 GOT1P17174 413 aa18.02■□□□□ 0.48
HSPG2-208ENST00000471322 RPL22P35268 128 aaKnown RBP18.02■□□□□ 0.48
HSPG2-208ENST00000471322 EPHB3P54753 998 aa18.02■□□□□ 0.48
HSPG2-208ENST00000471322 SLC5A9Q2M3M2 681 aa18.02■□□□□ 0.48
HSPG2-208ENST00000471322 RNASEH2BQ5TBB1 312 aaKnown RBP18.02■□□□□ 0.48
HSPG2-208ENST00000471322 UNC45BQ8IWX7 931 aa18.02■□□□□ 0.48
HSPG2-208ENST00000471322 PPIL6Q8IXY8 311 aa18.02■□□□□ 0.48
HSPG2-208ENST00000471322 GJD3Q8N144 294 aa18.02■□□□□ 0.48
HSPG2-208ENST00000471322 ELMOD1Q8N336 334 aa18.02■□□□□ 0.48
HSPG2-208ENST00000471322 GLIS1Q8NBF1 620 aa18.02■□□□□ 0.48
HSPG2-208ENST00000471322 DQX1Q8TE96 717 aaKnown RBP18.02■□□□□ 0.48
HSPG2-208ENST00000471322 ZNF512Q96ME7 567 aaPredicted RBP18.02■□□□□ 0.48
HSPG2-208ENST00000471322 FERMT1Q9BQL6 677 aa18.02■□□□□ 0.48
HSPG2-208ENST00000471322 SEMA4AQ9H3S1 761 aa18.02■□□□□ 0.48
HSPG2-208ENST00000471322 PAK5Q9P286 719 aa18.02■□□□□ 0.48
HSPG2-208ENST00000471322 PRKAG3Q9UGI9 489 aa18.02■□□□□ 0.48
HSPG2-208ENST00000471322 MAFFQ9ULX9 164 aa18.02■□□□□ 0.48
HSPG2-208ENST00000471322 RAD54BQ9Y620 910 aa18.02■□□□□ 0.48
HSPG2-208ENST00000471322 GOLGA6CA6NDK9 693 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 EEF2KO00418 725 aaKnown RBP18.01■□□□□ 0.47
HSPG2-208ENST00000471322 RIPK2O43353 540 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 RTN3O95197 1032 aaPredicted RBP18.01■□□□□ 0.47
HSPG2-208ENST00000471322 IGLV3-25P01717 112 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 GOLGA6DP0CG33 693 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 GJA1P17302 382 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 FSHRP23945 695 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 GBP2P32456 591 aaPredicted RBP18.01■□□□□ 0.47
HSPG2-208ENST00000471322 TUFMP49411 452 aaKnown RBP18.01■□□□□ 0.47
HSPG2-208ENST00000471322 ZNF844Q08AG5 666 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 BRMS1LQ5PSV4 323 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 PRUNE1Q86TP1 453 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 ADAM32Q8TC27 787 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 TCEAL4Q96EI5 215 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 SPATA17Q96L03 361 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 CEP295NLQ96MC4 621 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 MYADMQ96S97 322 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 PHACTR1Q9C0D0 580 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 USP29Q9HBJ7 922 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 ARHGEF4Q9NR80 690 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 GOLGA6AQ9NYA3 693 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 IL37Q9NZH6 218 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 HMGB1P1B2RPK0 211 aaPredicted RBP18.01■□□□□ 0.47
HSPG2-208ENST00000471322 PAPLNO95428 1278 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 MYL4P12829 197 aa18.01■□□□□ 0.47
HSPG2-208ENST00000471322 PTPN2P17706 415 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms