RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 PPARGP37231 505 aaPredicted RBP7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 ABCE1P61221 599 aaKnown RBP7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 SMARCB1Q12824 385 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 C15orf59Q2T9L4 293 aaPredicted RBP7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 KLHDC9Q8NEP7 349 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 SLC7A14Q8TBB6 771 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 TFB1MQ8WVM0 346 aaKnown RBP7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 CFHR5Q9BXR6 569 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.18□□□□□ -1.265e-11■■■■□ 24
GAPVD1-215ENST00000470056 NFS1Q9Y697 457 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 CDY1Q9Y6F8 540 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 SF3B1O75533 1304 aaKnown RBP eCLIP7.18□□□□□ -1.264e-6■■■■■ 63.2
GAPVD1-215ENST00000470056 CCDC78A2IDD5 438 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 LTFP02788 710 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 CHN1P15882 459 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 RPL34P49207 117 aaKnown RBP7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 INTS6LQ5JSJ4 861 aaKnown RBP7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 FAM26DQ5JW98 314 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 RNASEH2BQ5TBB1 312 aaKnown RBP7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 LRRC31Q6UY01 552 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 TRPV1Q8NER1 839 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 NTAN1Q96AB6 310 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 TLCD1Q96CP7 247 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 SCYL1Q96KG9 808 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 DPEP3Q9H4B8 488 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 NRDE2Q9H7Z3 1164 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 STX18Q9P2W9 335 aaKnown RBP7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 GABRQQ9UN88 632 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 TMEM154Q6P9G4 183 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 ATXN2LQ8WWM7 1075 aaKnown RBP7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 TRABDQ9H4I3 376 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 SYNJ2BP-COX16A0A087WUM0 186 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 SMIM31A0A1B0GVY4 71 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 CASTOR2A6NHX0 329 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 PSMD3O43242 534 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 H2AFYO75367 372 aaKnown RBP7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 IL1R2P27930 398 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 CDK16Q00536 496 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 UGP2Q16851 508 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 SLC45A4Q5BKX6 768 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 GOLGA2P5Q9HBQ8 144 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 COX16Q9P0S2 106 aa7.18□□□□□ -1.26
GAPVD1-215ENST00000470056 RNF103-CHMP3A0A140T963 221 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 NCAM1P13591 858 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 ACAT1P24752 427 aaKnown RBP7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 RIPPLY1Q0D2K3 151 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 ZNF280DQ6N043 979 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 INPP5DQ92835 1189 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 ZFP42Q96MM3 310 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 CREBZFQ9NS37 354 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.17□□□□□ -1.264e-14■■■□□ 16.5
GAPVD1-215ENST00000470056 PCDHB8Q9UN66 801 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 MYADML2A6NDP7 307 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 SELPP16109 830 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 GEMIN4P57678 1058 aaKnown RBP7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 YWHAHQ04917 246 aaPredicted RBP7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 GSTA3Q16772 222 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 SLC9A4Q6AI14 798 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 RHBDF2Q6PJF5 856 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 FAM47EQ6ZV65 393 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 CCNYQ8ND76 341 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 MAGED4Q96JG8 741 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 MAGEB18Q96M61 343 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 FAM167BQ9BTA0 163 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 NAT9Q9BTE0 207 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 CORO1CQ9ULV4 474 aaPredicted RBP7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 TCP11X1B4DZS4 312 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 CLASP2O75122 1294 aaKnown RBP7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 APOA4P06727 396 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 NME3Q13232 169 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 EFL1Q7Z2Z2 1120 aaKnown RBP7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 PRCCQ92733 491 aaPredicted RBP7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 CASP10Q92851 521 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 C9orf72Q96LT7 481 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 VAT1Q99536 393 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 NSMCE4AQ9NXX6 385 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 LGALS13Q9UHV8 139 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 ZMYND8Q9ULU4 1186 aaPredicted RBP7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 SORCS3Q9UPU3 1222 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 ATP11BQ9Y2G3 1177 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 COMMD3-BMI1R4GMX3 469 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 PTGESO14684 152 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 GABRDO14764 452 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 TADA2AO75478 443 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 ELNP15502 786 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 SKIV2L2P42285 1042 aaKnown RBP7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 SOX4Q06945 474 aaPredicted RBP7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 NOMO2Q5JPE7 1267 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 LIMS2Q7Z4I7 341 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 SCML4Q8N228 414 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 LRRC43Q8N309 656 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 CENPIQ92674 756 aaPredicted RBP7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 ZBTB9Q96C00 473 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 RAB6BQ9NRW1 208 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 SYN3O14994 580 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 CALB2P22676 271 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 IFNA8P32881 189 aa7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 MRPS15P82914 257 aaKnown RBP7.17□□□□□ -1.26
GAPVD1-215ENST00000470056 XIAPP98170 497 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms