RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 XPO1O14980 1071 aaKnown RBP18.31■□□□□ 0.52
MCF2L-221ENST00000469415 FYNP06241 537 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 ARHGAP8P85298 464 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 TAF1CQ15572 869 aaPredicted RBP18.31■□□□□ 0.52
MCF2L-221ENST00000469415 ACVR1CQ8NER5 493 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 STK32AQ8WU08 396 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 FAXDC2Q96IV6 333 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 SYT15Q9BQS2 421 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 C11orf84Q9BUA3 381 aaPredicted RBP18.31■□□□□ 0.52
MCF2L-221ENST00000469415 TMEM216Q9P0N5 145 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 ST3GAL5Q9UNP4 418 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 MTO1Q9Y2Z2 717 aaKnown RBP18.31■□□□□ 0.52
MCF2L-221ENST00000469415 FAM159BA6NKW6 160 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 CCDC22O60826 627 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 DNAJC6O75061 913 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 ATP5HO75947 161 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 B3GAT3O94766 335 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 AVPR1AP37288 418 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 ACADSBP45954 432 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 RCN1Q15293 331 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 ZDHHC17Q8IUH5 632 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 C10orf107Q8IVU9 208 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 ARNTL2Q8WYA1 636 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 HSFY1Q96LI6 401 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 SMOQ99835 787 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 BTBD10Q9BSF8 475 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 THTPAQ9BU02 230 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 CYP4F11Q9HBI6 524 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 CHRAC1Q9NRG0 131 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 A0A0G2JMZ2 1700 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 DFFAO00273 331 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 GSC2O15499 205 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 XPOTO43592 962 aaKnown RBP18.31■□□□□ 0.52
MCF2L-221ENST00000469415 NOS2P35228 1153 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 ADRA1BP35368 520 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 SKIV2L2P42285 1042 aaKnown RBP18.31■□□□□ 0.52
MCF2L-221ENST00000469415 GLRBP48167 497 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 NR2C2P49116 596 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 SEMA5AQ13591 1074 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 ITGA9Q13797 1035 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 OTOP3Q7RTS5 596 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 SMC1BQ8NDV3 1235 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 SCAMP5Q8TAC9 235 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 MICAL1Q8TDZ2 1067 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 CDKL2Q92772 493 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 TMEM209Q96SK2 561 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 RNPEPL1Q9HAU8 725 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 GNEQ9Y223 722 aaKnown RBP18.31■□□□□ 0.52
MCF2L-221ENST00000469415 CDY2AQ9Y6F7 541 aa18.31■□□□□ 0.52
MCF2L-221ENST00000469415 MKI67P46013 3256 aaKnown RBP18.3■□□□□ 0.52
MCF2L-221ENST00000469415 TRDMT1O14717 391 aaKnown RBP18.3■□□□□ 0.52
MCF2L-221ENST00000469415 PGM1P36871 562 aa18.3■□□□□ 0.52
MCF2L-221ENST00000469415 HUNKP57058 714 aa18.3■□□□□ 0.52
MCF2L-221ENST00000469415 THOC5Q13769 683 aaKnown RBP18.3■□□□□ 0.52
MCF2L-221ENST00000469415 ATG16L1Q676U5 607 aa18.3■□□□□ 0.52
MCF2L-221ENST00000469415 MCUQ8NE86 351 aa18.3■□□□□ 0.52
MCF2L-221ENST00000469415 TKTL2Q9H0I9 626 aa18.3■□□□□ 0.52
MCF2L-221ENST00000469415 EBF2Q9HAK2 575 aa18.3■□□□□ 0.52
MCF2L-221ENST00000469415 USP3Q9Y6I4 520 aa18.3■□□□□ 0.52
MCF2L-221ENST00000469415 DGKIO75912 1065 aa18.3■□□□□ 0.52
MCF2L-221ENST00000469415 BPGMP07738 259 aa18.3■□□□□ 0.52
MCF2L-221ENST00000469415 ITGA2BP08514 1039 aa18.3■□□□□ 0.52
MCF2L-221ENST00000469415 NCF2P19878 526 aaPredicted RBP18.3■□□□□ 0.52
MCF2L-221ENST00000469415 IRF9Q00978 393 aa18.3■□□□□ 0.52
MCF2L-221ENST00000469415 USP4Q13107 963 aa18.3■□□□□ 0.52
MCF2L-221ENST00000469415 FAM110CQ1W6H9 321 aa18.3■□□□□ 0.52
MCF2L-221ENST00000469415 SDHAF4Q5VUM1 108 aa18.3■□□□□ 0.52
MCF2L-221ENST00000469415 SPRYD7Q5W111 196 aa18.3■□□□□ 0.52
MCF2L-221ENST00000469415 ATG14Q6ZNE5 492 aa18.3■□□□□ 0.52
MCF2L-221ENST00000469415 ARHGAP36Q6ZRI8 547 aa18.3■□□□□ 0.52
MCF2L-221ENST00000469415 STRADAQ7RTN6 431 aa18.3■□□□□ 0.52
MCF2L-221ENST00000469415 PLD6Q8N2A8 252 aaKnown RBP18.3■□□□□ 0.52
MCF2L-221ENST00000469415 SPATA22Q8NHS9 363 aa18.3■□□□□ 0.52
MCF2L-221ENST00000469415 CCDC124Q96CT7 223 aaKnown RBP18.3■□□□□ 0.52
MCF2L-221ENST00000469415 LRRC37A2A6NM11 1700 aa18.3■□□□□ 0.52
MCF2L-221ENST00000469415 CLGNO14967 610 aa18.29■□□□□ 0.52
MCF2L-221ENST00000469415 PDK1Q15118 436 aa18.29■□□□□ 0.52
MCF2L-221ENST00000469415 FSCN1Q16658 493 aaKnown RBP18.29■□□□□ 0.52
MCF2L-221ENST00000469415 STRA8Q7Z7C7 330 aa18.29■□□□□ 0.52
MCF2L-221ENST00000469415 CHSY1Q86X52 802 aa18.29■□□□□ 0.52
MCF2L-221ENST00000469415 SKA1Q96BD8 255 aa18.29■□□□□ 0.52
MCF2L-221ENST00000469415 HNRNPABQ99729 332 aaKnown RBP18.29■□□□□ 0.52
MCF2L-221ENST00000469415 DERAQ9Y315 318 aa18.29■□□□□ 0.52
MCF2L-221ENST00000469415 MSI1O43347 362 aaKnown RBP18.29■□□□□ 0.52
MCF2L-221ENST00000469415 OR4Q2P0C623 313 aa18.29■□□□□ 0.52
MCF2L-221ENST00000469415 NFKB1P19838 968 aa18.29■□□□□ 0.52
MCF2L-221ENST00000469415 CALB2P22676 271 aa18.29■□□□□ 0.52
MCF2L-221ENST00000469415 CCR10P46092 362 aa18.29■□□□□ 0.52
MCF2L-221ENST00000469415 ZBTB17Q13105 803 aa18.29■□□□□ 0.52
MCF2L-221ENST00000469415 ACSBG2Q5FVE4 666 aa18.29■□□□□ 0.52
MCF2L-221ENST00000469415 FAM35AQ86V20 835 aa18.29■□□□□ 0.52
MCF2L-221ENST00000469415 C2orf69Q8N8R5 385 aa18.29■□□□□ 0.52
MCF2L-221ENST00000469415 ZMIZ2Q8NF64 920 aa18.29■□□□□ 0.52
MCF2L-221ENST00000469415 INPP5DQ92835 1189 aa18.29■□□□□ 0.52
MCF2L-221ENST00000469415 NPY6RQ99463 290 aa18.29■□□□□ 0.52
MCF2L-221ENST00000469415 MORF4L1Q9UBU8 362 aa18.29■□□□□ 0.52
MCF2L-221ENST00000469415 TPBGLP0DKB5 382 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 TPSB2P20231 275 aa18.28■□□□□ 0.52
MCF2L-221ENST00000469415 PTDSS1P48651 473 aaKnown RBP18.28■□□□□ 0.52
MCF2L-221ENST00000469415 TPSAB1Q15661 275 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms