RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 HOXD9P28356 352 aaPredicted RBP15.68■□□□□ 0.1
SNIP1-202ENST00000468040 EPHB2P29323 1055 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 HOXC13P31276 330 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 HCAR3P49019 387 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 SGSHP51688 502 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 ARSEP51690 589 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 CDH4P55283 916 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 RPS24P62847 133 aaKnown RBP15.68■□□□□ 0.1
SNIP1-202ENST00000468040 ATP13A4Q4VNC1 1196 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 ZNF569Q5MCW4 686 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 FAM72AQ5TYM5 149 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 FAM72DQ6L9T8 149 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 RWDD4Q6NW29 188 aaKnown RBP15.68■□□□□ 0.1
SNIP1-202ENST00000468040 CHST9Q7L1S5 443 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 FAM72BQ86X60 149 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 CFAP52Q8N1V2 620 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 KRT35Q92764 455 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 BHMTQ93088 406 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 EXOC4Q96A65 974 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 MYEOVQ96EZ4 313 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 HES6Q96HZ4 224 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 XPO6Q96QU8 1125 aaKnown RBP15.68■□□□□ 0.1
SNIP1-202ENST00000468040 ZNF670Q9BS34 389 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 CALN1Q9BXU9 219 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 SLC2A11Q9BYW1 496 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 CATSPERBQ9H7T0 1116 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 PCDH18Q9HCL0 1135 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 KLHL11Q9NVR0 708 aa15.68■□□□□ 0.1
SNIP1-202ENST00000468040 ZNF487B1APH4 448 aa15.67■□□□□ 0.1
SNIP1-202ENST00000468040 DAPK3O43293 454 aa15.67■□□□□ 0.1
SNIP1-202ENST00000468040 ZRANB2O95218 330 aaKnown RBP eCLIP15.67■□□□□ 0.1
SNIP1-202ENST00000468040 LUC7L3O95232 432 aaKnown RBP15.67■□□□□ 0.1
SNIP1-202ENST00000468040 RHOQP17081 205 aa15.67■□□□□ 0.1
SNIP1-202ENST00000468040 GJA4P35212 333 aa15.67■□□□□ 0.1
SNIP1-202ENST00000468040 RWDD2BP57060 319 aa15.67■□□□□ 0.1
SNIP1-202ENST00000468040 CDH18Q13634 790 aa15.67■□□□□ 0.1
SNIP1-202ENST00000468040 RPS6KA1Q15418 735 aa15.67■□□□□ 0.1
SNIP1-202ENST00000468040 PREPLQ4J6C6 727 aaPredicted RBP15.67■□□□□ 0.1
SNIP1-202ENST00000468040 MEI1Q5TIA1 1274 aa15.67■□□□□ 0.1
SNIP1-202ENST00000468040 RNF43Q68DV7 783 aa15.67■□□□□ 0.1
SNIP1-202ENST00000468040 C1orf228Q6PIY5 440 aa15.67■□□□□ 0.1
SNIP1-202ENST00000468040 RFX8Q6ZV50 586 aa15.67■□□□□ 0.1
SNIP1-202ENST00000468040 RALGPS2Q86X27 583 aaPredicted RBP15.67■□□□□ 0.1
SNIP1-202ENST00000468040 RCOR2Q8IZ40 523 aa15.67■□□□□ 0.1
SNIP1-202ENST00000468040 EXD1Q8NHP7 514 aa15.67■□□□□ 0.1
SNIP1-202ENST00000468040 RAPGEF5Q92565 580 aa15.67■□□□□ 0.1
SNIP1-202ENST00000468040 RBM41Q96IZ5 413 aaKnown RBP15.67■□□□□ 0.1
SNIP1-202ENST00000468040 NECAB3Q96P71 396 aaPredicted RBP15.67■□□□□ 0.1
SNIP1-202ENST00000468040 UHRF1Q96T88 793 aaPredicted RBP15.67■□□□□ 0.1
SNIP1-202ENST00000468040 MAGEB5Q9BZ81 275 aa15.67■□□□□ 0.1
SNIP1-202ENST00000468040 C8orf33Q9H7E9 229 aaPredicted RBP15.67■□□□□ 0.1
SNIP1-202ENST00000468040 PLK2Q9NYY3 685 aa15.67■□□□□ 0.1
SNIP1-202ENST00000468040 CWC15Q9P013 229 aaKnown RBP15.67■□□□□ 0.1
SNIP1-202ENST00000468040 NEU3Q9UQ49 428 aa15.67■□□□□ 0.1
SNIP1-202ENST00000468040 JRKLQ9Y4A0 524 aa15.67■□□□□ 0.1
SNIP1-202ENST00000468040 TICRRQ7Z2Z1 1910 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 MYO10Q9HD67 2058 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 COL4A2P08572 1712 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.66■□□□□ 0.1
SNIP1-202ENST00000468040 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.66■□□□□ 0.1
SNIP1-202ENST00000468040 GOT1P17174 413 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 KDELR1P24390 212 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 EIF2DP41214 584 aaKnown RBP15.66■□□□□ 0.1
SNIP1-202ENST00000468040 MARCKSL1P49006 195 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 PEX5P50542 639 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 OXCT1P55809 520 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 ZNF177Q13360 481 aaPredicted RBP15.66■□□□□ 0.1
SNIP1-202ENST00000468040 DPYSL3Q14195 570 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 ALFQ53S48 1182 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 ARTNQ5T4W7 220 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 MFN1Q8IWA4 741 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 ETFBKMTQ8IXQ9 262 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 TTC8Q8TAM2 541 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 TSC1Q92574 1164 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 CSPG4P5Q96PW8 444 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 CD320Q9NPF0 282 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.66■□□□□ 0.1
SNIP1-202ENST00000468040 MPP6Q9NZW5 540 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 WNT16Q9UBV4 365 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 MUTYHQ9UIF7 546 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 PACSIN2Q9UNF0 486 aaPredicted RBP15.66■□□□□ 0.1
SNIP1-202ENST00000468040 PIAS3Q9Y6X2 628 aa15.66■□□□□ 0.1
SNIP1-202ENST00000468040 UNC80Q8N2C7 3258 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 COL4A3Q01955 1670 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 WASH4PA8MWX3 477 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 SPECC1L-ADORA2AF8WAN1 911 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 PI4K2BG5E9Z4 385 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 H0Y626 953 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 DDX3YO15523 660 aaKnown RBP15.65■□□□□ 0.1
SNIP1-202ENST00000468040 TULP3O75386 442 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 CNTN5O94779 1100 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 CD48P09326 243 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 OR1E1P30953 314 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 CTHP32929 405 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 CETN2P41208 172 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 MAPKAPK2P49137 400 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 IRAK1P51617 712 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 COPS2P61201 443 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 GNG11P61952 73 aa15.65■□□□□ 0.1
SNIP1-202ENST00000468040 DPYSQ14117 519 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms