RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 MMGT1Q8N4V1 131 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 TTC9BQ8N6N2 239 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 ARFGAP1Q8N6T3 406 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 EIF1ADQ8N9N8 165 aaKnown RBP6.21□□□□□ -1.42
CHMP3-206ENST00000466032 BBOF1Q8ND07 529 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 SPATA4Q8NEY3 305 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 ATL2Q8NHH9 583 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 UBXN4Q92575 508 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 HSPH1Q92598 858 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 EDEM1Q92611 657 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 ALG3Q92685 438 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 KRT35Q92764 455 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 P3H4Q92791 437 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 SLCO2A1Q92959 643 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 TBC1D31Q96DN5 1066 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 PIWIL1Q96J94 861 aaKnown RBP6.21□□□□□ -1.42
CHMP3-206ENST00000466032 RIPOR3Q96MK2 946 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 NECTIN4Q96NY8 510 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 PPP1R2P1Q96PQ5 205 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 RNF157Q96PX1 679 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 GAS2L1Q99501 681 aaPredicted RBP6.21□□□□□ -1.42
CHMP3-206ENST00000466032 SNRNP25Q9BV90 132 aaKnown RBP6.21□□□□□ -1.42
CHMP3-206ENST00000466032 CALN1Q9BXU9 219 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 ATXN3LQ9H3M9 355 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 DHX35Q9H5Z1 703 aaKnown RBP6.21□□□□□ -1.42
CHMP3-206ENST00000466032 TASP1Q9H6P5 420 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 LRRC19Q9H756 370 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 NMUR1Q9HB89 426 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 PIGVQ9NUD9 493 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.21□□□□□ -1.42
CHMP3-206ENST00000466032 GDE1Q9NZC3 331 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 OR12D3Q9UGF7 316 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 PCSK1NQ9UHG2 260 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 PCYOX1Q9UHG3 505 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 STOML2Q9UJZ1 356 aa6.21□□□□□ -1.42
CHMP3-206ENST00000466032 PACSIN2Q9UNF0 486 aaPredicted RBP6.21□□□□□ -1.42
CHMP3-206ENST00000466032 PLXNA4Q9HCM2 1894 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 CCDC195A0A1B0GUA6 201 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 SLC12A8A0AV02 714 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 F5H5T6 163 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 EEF2KO00418 725 aaKnown RBP6.2□□□□□ -1.42
CHMP3-206ENST00000466032 APOL1O14791 398 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 PPP1R12AO14974 1030 aaPredicted RBP6.2□□□□□ -1.42
CHMP3-206ENST00000466032 MCF2LO15068 1137 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 COCHO43405 550 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 PHF2O75151 1096 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 CLDN11O75508 207 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 STK10O94804 968 aaKnown RBP6.2□□□□□ -1.42
CHMP3-206ENST00000466032 GJB6O95452 261 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 CYBBP04839 570 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 RHOP08100 348 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 MBL2P11226 248 aaPredicted RBP6.2□□□□□ -1.42
CHMP3-206ENST00000466032 NEFHP12036 1026 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 BMP2P12643 396 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 IL1R2P27930 398 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 CXCR5P32302 372 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 MLLT3P42568 568 aaPredicted RBP6.2□□□□□ -1.42
CHMP3-206ENST00000466032 MTHFRP42898 656 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 NRIP1P48552 1158 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 MAPKAPK2P49137 400 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 ARSEP51690 589 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 YBEYP58557 167 aaPredicted RBP6.2□□□□□ -1.42
CHMP3-206ENST00000466032 TPI1P60174 286 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 GPS2Q13227 327 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 KLF1Q13351 362 aaPredicted RBP6.2□□□□□ -1.42
CHMP3-206ENST00000466032 MTMR3Q13615 1198 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 DOC2BQ14184 412 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 DPYSL3Q14195 570 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 PDK1Q15118 436 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 C5orf22Q49AR2 442 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 PREPLQ4J6C6 727 aaPredicted RBP6.2□□□□□ -1.42
CHMP3-206ENST00000466032 ANKRD20A8PQ5CZ79 823 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 ATAT1Q5SQI0 421 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 TEX35Q5T0J7 233 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 ADGRF1Q5T601 910 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 LCE4AQ5TA78 99 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 DCAF12L1Q5VU92 463 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 SDHAF4Q5VUM1 108 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 SLC9A4Q6AI14 798 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 TRNP1Q6NT89 227 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 ZNF783Q6ZMS7 281 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 CEP128Q6ZU80 1094 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 RFX8Q6ZV50 586 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 HTR3DQ70Z44 454 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 METTL3Q86U44 580 aaKnown RBP6.2□□□□□ -1.42
CHMP3-206ENST00000466032 FAM131BQ86XD5 332 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 RFX6Q8HWS3 928 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 TMC8Q8IU68 726 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 EGFL6Q8IUX8 553 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 CNPY4Q8N129 248 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 CPXM2Q8N436 756 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 CCDC89Q8N998 374 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 COG1Q8WTW3 980 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 SMG7Q92540 1137 aaKnown RBP6.2□□□□□ -1.42
CHMP3-206ENST00000466032 TSC1Q92574 1164 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 MAGOHBQ96A72 148 aaKnown RBP6.2□□□□□ -1.42
CHMP3-206ENST00000466032 VAT1Q99536 393 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 CORO1BQ9BR76 489 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 CARD6Q9BX69 1037 aa6.2□□□□□ -1.42
CHMP3-206ENST00000466032 LRRC3Q9BY71 257 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms