RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 TXNL4AP83876 142 aaKnown RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 SP4Q02446 784 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 PRKG1Q13976 671 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 LPIN1Q14693 890 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 STILQ15468 1287 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 C15orf59Q2T9L4 293 aaPredicted RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 SLC9B1Q4ZJI4 515 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 GRTP1Q5TC63 336 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 RSBN1LQ6PCB5 846 aaPredicted RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 FAM183BPQ6ZVS7 135 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 ZNF554Q86TJ5 538 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 CROCCP3Q8IVE0 287 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 SPNS2Q8IVW8 549 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 CHERPQ8IWX8 916 aaKnown RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 HACE1Q8IYU2 909 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 DSELQ8IZU8 1212 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 LILRA2Q8N149 483 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 AFG1LQ8WV93 481 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 TMEM176AQ96HP8 235 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 LENG8Q96PV6 779 aaPredicted RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 SNRNP25Q9BV90 132 aaKnown RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 TMEM39BQ9GZU3 492 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 FAM124BQ9H5Z6 455 aaPredicted RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 ZNF385DQ9H6B1 395 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 TCF7L2Q9NQB0 619 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 DDX18Q9NVP1 670 aaKnown RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 RHBDL2Q9NX52 303 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 MTMR10Q9NXD2 777 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 BTBD7Q9P203 1132 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 NXF1Q9UBU9 619 aaKnown RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 RSL24D1Q9UHA3 163 aaKnown RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 ZNHIT2Q9UHR6 403 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 MID2Q9UJV3 735 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 APPL1Q9UKG1 709 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 G3BP2Q9UN86 482 aaKnown RBP7.48□□□□□ -1.21
USP48-206ENST00000464577 SH3BP1Q9Y3L3 701 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 RPS6KL1Q9Y6S9 549 aa7.48□□□□□ -1.21
USP48-206ENST00000464577 PARP14Q460N5 1801 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 HACD1B0YJ81 288 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 VWA5AO00534 786 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 TADA2AO75478 443 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 IL18RAPO95256 599 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 PRKCBP05771 671 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 ME2P23368 584 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 PCSK6P29122 969 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 ICAM3P32942 547 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 HSPA1LP34931 641 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 OAZ1P54368 228 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 PRKAA2P54646 552 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 TUBA4AP68366 448 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 MRPS22P82650 360 aaKnown RBP7.47□□□□□ -1.21
USP48-206ENST00000464577 CDKL1Q00532 357 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 PPIDQ08752 370 aaKnown RBP7.47□□□□□ -1.21
USP48-206ENST00000464577 FRG1Q14331 258 aaKnown RBP7.47□□□□□ -1.21
USP48-206ENST00000464577 CCDC14Q49A88 953 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 RAB6CQ53S08 254 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 C6orf52Q5T4I8 152 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 OR6B2Q6IFH4 312 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 TSHZ1Q6ZSZ6 1077 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 SNX32Q86XE0 403 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 TTLL6Q8N841 843 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 ZNF781Q8N8C0 355 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 TMEM102Q8N9M5 508 aaPredicted RBP7.47□□□□□ -1.21
USP48-206ENST00000464577 TDRD5Q8NAT2 981 aaKnown RBP7.47□□□□□ -1.21
USP48-206ENST00000464577 SLC7A14Q8TBB6 771 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 FNDC8Q8TC99 324 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 NLRP7Q8WX94 980 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 CLMNQ96JQ2 1002 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 TWNKQ96RR1 684 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 GMLQ99445 158 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 CPNE1Q99829 537 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 PKP2Q99959 881 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 TCHPQ9BT92 498 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 RAB6CQ9H0N0 254 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 RNPEPQ9H4A4 650 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 VRTNQ9H8Y1 702 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 COPS7BQ9H9Q2 264 aaPredicted RBP7.47□□□□□ -1.21
USP48-206ENST00000464577 GBA2Q9HCG7 927 aaPredicted RBP7.47□□□□□ -1.21
USP48-206ENST00000464577 GPATCH2LQ9NWQ4 482 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 SIX4Q9UIU6 781 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 PCDHGB4Q9UN71 923 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 PCDHGB5Q9Y5G0 923 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 A0A0A0MRY4 1105 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.47□□□□□ -1.21
USP48-206ENST00000464577 MATN2O00339 956 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 AIM2O14862 343 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 ADCY6O43306 1168 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 MAFO75444 373 aaPredicted RBP7.47□□□□□ -1.21
USP48-206ENST00000464577 MPOP05164 745 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 P4HA1P13674 534 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 PSMC3P17980 439 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 CYP2F1P24903 491 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 TYK2P29597 1187 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 ATICP31939 592 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 PPARGP37231 505 aaPredicted RBP7.47□□□□□ -1.21
USP48-206ENST00000464577 GRIA1P42261 906 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 GALK1P51570 392 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 CEACAM7Q14002 265 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 GK3PQ14409 553 aa7.47□□□□□ -1.21
USP48-206ENST00000464577 DPYSL2Q16555 572 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms