RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 SLC35F5Q8WV83 523 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 ACSF2Q96CM8 615 aaPredicted RBP10.23□□□□□ -0.77
PTPRD-207ENST00000463477 HAUS1Q96CS2 278 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 FAF2Q96CS3 445 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 RNF157Q96PX1 679 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 PEBP4Q96S96 227 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 ELAC2Q9BQ52 826 aaKnown RBP10.23□□□□□ -0.77
PTPRD-207ENST00000463477 DNAI2Q9GZS0 605 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 POMKQ9H5K3 350 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 PRDM16Q9HAZ2 1276 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 WDR6Q9NNW5 1121 aaKnown RBP10.23□□□□□ -0.77
PTPRD-207ENST00000463477 RABGEF1Q9UJ41 708 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 CDH22Q9UJ99 828 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 CLUHO75153 1309 aa10.23□□□□□ -0.77
PTPRD-207ENST00000463477 E5RJQ4 531 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 CHADO15335 359 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 HUS1O60921 280 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 FAM155BO75949 473 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 CD48P09326 243 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 PTPN9P43378 593 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 GDF10P55107 478 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 CDH6P55285 790 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 ARPP19P56211 112 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 GEMIN4P57678 1058 aaKnown RBP10.22□□□□□ -0.77
PTPRD-207ENST00000463477 GPX6P59796 221 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 SLC6A3Q01959 620 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 SMARCB1Q12824 385 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 ORC1Q13415 861 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 FASTKD3Q14CZ7 662 aaKnown RBP10.22□□□□□ -0.77
PTPRD-207ENST00000463477 GOLGA7BQ2TAP0 167 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 SLC9A4Q6AI14 798 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 OR6B2Q6IFH4 312 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 LIMS2Q7Z4I7 341 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 UNC45BQ8IWX7 931 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 PDIK1LQ8N165 341 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 CRYBG2Q8N1P7 616 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 TMEM86AQ8N2M4 240 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 TOP6BLQ8N6T0 577 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 SLC7A14Q8TBB6 771 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 UBA3Q8TBC4 463 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 PYROXD1Q8WU10 500 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 SMG7Q92540 1137 aaKnown RBP10.22□□□□□ -0.77
PTPRD-207ENST00000463477 ALKBH8Q96BT7 664 aaKnown RBP10.22□□□□□ -0.77
PTPRD-207ENST00000463477 ZNF670Q9BS34 389 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 MAK16Q9BXY0 300 aaKnown RBP10.22□□□□□ -0.77
PTPRD-207ENST00000463477 TRABDQ9H4I3 376 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 VPS37BQ9H9H4 285 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 PNPLA8Q9NP80 782 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 HAUS2Q9NVX0 235 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 HSFX1Q9UBD0 423 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 PCSK1NQ9UHG2 260 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 ARL2BPQ9Y2Y0 163 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.22□□□□□ -0.77
PTPRD-207ENST00000463477 BCLAF3A2AJT9 711 aaKnown RBP10.22□□□□□ -0.77
PTPRD-207ENST00000463477 CFAP73A6NFT4 308 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 GABRDO14764 452 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 TYROBPO43914 113 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 XYLBO75191 536 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 CPB1P15086 417 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 TAC1P20366 129 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 SDC4P31431 198 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 HNRNPH1P31943 449 aaKnown RBP10.22□□□□□ -0.77
PTPRD-207ENST00000463477 LHX1P48742 406 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 WDR4P57081 412 aaKnown RBP10.22□□□□□ -0.77
PTPRD-207ENST00000463477 DYNLT1P63172 113 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 ADCY1Q08828 1119 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 CCDC15Q0P6D6 951 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 SPARCL1Q14515 664 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 KCNJ11Q14654 390 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 LRRC14Q15048 493 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 SOWAHAQ2M3V2 549 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 GALNTL6Q49A17 601 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 CCDC14Q49A88 953 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 PPP1R26Q5T8A7 1209 aaPredicted RBP10.22□□□□□ -0.77
PTPRD-207ENST00000463477 NUGGCQ68CJ6 796 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 RNF43Q68DV7 783 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 RNF19BQ6ZMZ0 732 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 SPATA21Q7Z572 469 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 TTC30AQ86WT1 665 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 PLCD3Q8N3E9 789 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 ANKRD42Q8N9B4 389 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 HSPH1Q92598 858 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 CENPIQ92674 756 aaPredicted RBP10.22□□□□□ -0.77
PTPRD-207ENST00000463477 KHSRPQ92945 711 aaKnown RBP eCLIP10.22□□□□□ -0.77
PTPRD-207ENST00000463477 SMC6Q96SB8 1091 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 RTP3Q9BQQ7 232 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 ACBD6Q9BR61 282 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 CALN1Q9BXU9 219 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 PIDD1Q9HB75 910 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 CYP4F11Q9HBI6 524 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.22□□□□□ -0.77
PTPRD-207ENST00000463477 FGFR1OP2Q9NVK5 253 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 TMEM51Q9NW97 253 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 PAK5Q9P286 719 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 HESX1Q9UBX0 185 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 TBK1Q9UHD2 729 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 STARD13Q9Y3M8 1113 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 SNX9Q9Y5X1 595 aa10.22□□□□□ -0.77
PTPRD-207ENST00000463477 TSC2P49815 1807 aa10.21□□□□□ -0.77
PTPRD-207ENST00000463477 TMEM63AO94886 807 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms