RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 ACSL4O60488 711 aa21.54■■□□□ 1.04
CPSF7-209ENST00000463244 SIN3BO75182 1162 aa21.54■■□□□ 1.04
CPSF7-209ENST00000463244 LCP1P13796 627 aa21.54■■□□□ 1.04
CPSF7-209ENST00000463244 GALCP54803 685 aa21.54■■□□□ 1.04
CPSF7-209ENST00000463244 YWHAEP62258 255 aaKnown RBP21.54■■□□□ 1.04
CPSF7-209ENST00000463244 NCEH1Q6PIU2 408 aa21.54■■□□□ 1.04
CPSF7-209ENST00000463244 SMYD4Q8IYR2 804 aaPredicted RBP21.54■■□□□ 1.04
CPSF7-209ENST00000463244 GANCQ8TET4 914 aa21.54■■□□□ 1.04
CPSF7-209ENST00000463244 AZIN2Q96A70 460 aa21.54■■□□□ 1.04
CPSF7-209ENST00000463244 ELF4Q99607 663 aaPredicted RBP21.54■■□□□ 1.04
CPSF7-209ENST00000463244 EBF2Q9HAK2 575 aa21.54■■□□□ 1.04
CPSF7-209ENST00000463244 KIAA1257Q9ULG3 409 aa21.54■■□□□ 1.04
CPSF7-209ENST00000463244 ASH1LQ9NR48 2969 aaKnown RBP21.53■■□□□ 1.04
CPSF7-209ENST00000463244 C10orf142B7Z368 130 aa21.53■■□□□ 1.04
CPSF7-209ENST00000463244 GABBR2O75899 941 aa21.53■■□□□ 1.04
CPSF7-209ENST00000463244 WNT1P04628 370 aa21.53■■□□□ 1.04
CPSF7-209ENST00000463244 CSKP41240 450 aa21.53■■□□□ 1.04
CPSF7-209ENST00000463244 ST8SIA6P61647 398 aa21.53■■□□□ 1.04
CPSF7-209ENST00000463244 SFSWAPQ12872 951 aaKnown RBP21.53■■□□□ 1.04
CPSF7-209ENST00000463244 ARID5BQ14865 1188 aa21.53■■□□□ 1.04
CPSF7-209ENST00000463244 DCAF17Q5H9S7 520 aaPredicted RBP21.53■■□□□ 1.04
CPSF7-209ENST00000463244 PRAMEF14Q5SWL7 426 aa21.53■■□□□ 1.04
CPSF7-209ENST00000463244 TCERG1LQ5VWI1 586 aa21.53■■□□□ 1.04
CPSF7-209ENST00000463244 NADSYN1Q6IA69 706 aa21.53■■□□□ 1.04
CPSF7-209ENST00000463244 LCLAT1Q6UWP7 414 aa21.53■■□□□ 1.04
CPSF7-209ENST00000463244 GATAD2AQ86YP4 633 aa21.53■■□□□ 1.04
CPSF7-209ENST00000463244 HJURPQ8NCD3 748 aaPredicted RBP21.53■■□□□ 1.04
CPSF7-209ENST00000463244 SLC35F5Q8WV83 523 aa21.53■■□□□ 1.04
CPSF7-209ENST00000463244 IRGQQ8WZA9 623 aa21.53■■□□□ 1.04
CPSF7-209ENST00000463244 MRGPRX3Q96LB0 322 aa21.53■■□□□ 1.04
CPSF7-209ENST00000463244 PRICKLE1Q96MT3 831 aaPredicted RBP21.53■■□□□ 1.04
CPSF7-209ENST00000463244 STIM2Q9P246 746 aa21.53■■□□□ 1.04
CPSF7-209ENST00000463244 ADAMTS1Q9UHI8 967 aa21.53■■□□□ 1.04
CPSF7-209ENST00000463244 INTS6Q9UL03 887 aaKnown RBP21.53■■□□□ 1.04
CPSF7-209ENST00000463244 NYNRINQ9P2P1 1898 aaKnown RBP21.53■■□□□ 1.04
CPSF7-209ENST00000463244 MGAQ8IWI9 3026 aa21.53■■□□□ 1.04
CPSF7-209ENST00000463244 EIF4E1BA6NMX2 242 aaKnown RBP21.52■■□□□ 1.04
CPSF7-209ENST00000463244 PLK4O00444 970 aa21.52■■□□□ 1.04
CPSF7-209ENST00000463244 MID1O15344 667 aa21.52■■□□□ 1.04
CPSF7-209ENST00000463244 RNASEH1O60930 286 aaKnown RBP21.52■■□□□ 1.04
CPSF7-209ENST00000463244 ASLP04424 464 aa21.52■■□□□ 1.04
CPSF7-209ENST00000463244 RGS7P49802 495 aa21.52■■□□□ 1.04
CPSF7-209ENST00000463244 TBX4P57082 545 aa21.52■■□□□ 1.04
CPSF7-209ENST00000463244 CST6Q15828 149 aa21.52■■□□□ 1.04
CPSF7-209ENST00000463244 PMF1Q6P1K2 205 aa21.52■■□□□ 1.04
CPSF7-209ENST00000463244 DHX40Q8IX18 779 aaKnown RBP21.52■■□□□ 1.04
CPSF7-209ENST00000463244 KDM1BQ8NB78 822 aa21.52■■□□□ 1.04
CPSF7-209ENST00000463244 SKA1Q96BD8 255 aa21.52■■□□□ 1.04
CPSF7-209ENST00000463244 NEUROG2Q9H2A3 272 aa21.52■■□□□ 1.04
CPSF7-209ENST00000463244 FZD4Q9ULV1 537 aa21.52■■□□□ 1.04
CPSF7-209ENST00000463244 MYLKQ15746 1914 aa21.52■■□□□ 1.04
CPSF7-209ENST00000463244 A0A1W2PP55 124 aa21.51■■□□□ 1.03
CPSF7-209ENST00000463244 LRRC72A6NJI9 287 aa21.51■■□□□ 1.03
CPSF7-209ENST00000463244 PIK3R2O00459 728 aa21.51■■□□□ 1.03
CPSF7-209ENST00000463244 ENC1O14682 589 aa21.51■■□□□ 1.03
CPSF7-209ENST00000463244 SLC16A3O15427 465 aaKnown RBP21.51■■□□□ 1.03
CPSF7-209ENST00000463244 ABCG1P45844 678 aa21.51■■□□□ 1.03
CPSF7-209ENST00000463244 KRT85P78386 507 aa21.51■■□□□ 1.03
CPSF7-209ENST00000463244 KCNJ12Q14500 433 aa21.51■■□□□ 1.03
CPSF7-209ENST00000463244 SHBQ15464 509 aa21.51■■□□□ 1.03
CPSF7-209ENST00000463244 C9orf64Q5T6V5 341 aa21.51■■□□□ 1.03
CPSF7-209ENST00000463244 OR2T34Q8NGX1 318 aa21.51■■□□□ 1.03
CPSF7-209ENST00000463244 SAP25Q8TEE9 199 aa21.51■■□□□ 1.03
CPSF7-209ENST00000463244 TFAP2BQ92481 460 aa21.51■■□□□ 1.03
CPSF7-209ENST00000463244 MYEOVQ96EZ4 313 aa21.51■■□□□ 1.03
CPSF7-209ENST00000463244 TYW5A2RUC4 315 aaKnown RBP21.5■■□□□ 1.03
CPSF7-209ENST00000463244 CBX4O00257 560 aa21.5■■□□□ 1.03
CPSF7-209ENST00000463244 RFPL3O75679 317 aa21.5■■□□□ 1.03
CPSF7-209ENST00000463244 RNASEH2AO75792 299 aaKnown RBP21.5■■□□□ 1.03
CPSF7-209ENST00000463244 LTFP02788 710 aa21.5■■□□□ 1.03
CPSF7-209ENST00000463244 C1SP09871 688 aa21.5■■□□□ 1.03
CPSF7-209ENST00000463244 CDK4P11802 303 aa21.5■■□□□ 1.03
CPSF7-209ENST00000463244 ABCB4P21439 1286 aa21.5■■□□□ 1.03
CPSF7-209ENST00000463244 TBXAS1P24557 533 aaPredicted RBP21.5■■□□□ 1.03
CPSF7-209ENST00000463244 CD38P28907 300 aa21.5■■□□□ 1.03
CPSF7-209ENST00000463244 HNF1BP35680 557 aa21.5■■□□□ 1.03
CPSF7-209ENST00000463244 RPS24P62847 133 aaKnown RBP21.5■■□□□ 1.03
CPSF7-209ENST00000463244 DNAJC3Q13217 504 aa21.5■■□□□ 1.03
CPSF7-209ENST00000463244 MMAAQ8IVH4 418 aaKnown RBP21.5■■□□□ 1.03
CPSF7-209ENST00000463244 CARNMT1Q8N4J0 409 aa21.5■■□□□ 1.03
CPSF7-209ENST00000463244 CLEC4CQ8WTT0 213 aa21.5■■□□□ 1.03
CPSF7-209ENST00000463244 NXPE2Q96DL1 559 aa21.5■■□□□ 1.03
CPSF7-209ENST00000463244 CNDP2Q96KP4 475 aaKnown RBP21.5■■□□□ 1.03
CPSF7-209ENST00000463244 DCBLD2Q96PD2 775 aa21.5■■□□□ 1.03
CPSF7-209ENST00000463244 DDX50Q9BQ39 737 aaKnown RBP21.5■■□□□ 1.03
CPSF7-209ENST00000463244 GOLPH3LQ9H4A5 285 aa21.5■■□□□ 1.03
CPSF7-209ENST00000463244 AASDHPPTQ9NRN7 309 aa21.5■■□□□ 1.03
CPSF7-209ENST00000463244 ERVW-1Q9UQF0 538 aa21.5■■□□□ 1.03
CPSF7-209ENST00000463244 ATMQ13315 3056 aa21.5■■□□□ 1.03
CPSF7-209ENST00000463244 A0A1W2PR77 199 aa21.49■■□□□ 1.03
CPSF7-209ENST00000463244 TARSL2A2RTX5 802 aaKnown RBP21.49■■□□□ 1.03
CPSF7-209ENST00000463244 YKT6O15498 198 aa21.49■■□□□ 1.03
CPSF7-209ENST00000463244 LDOC1O95751 146 aaPredicted RBP21.49■■□□□ 1.03
CPSF7-209ENST00000463244 ITGAVP06756 1048 aa21.49■■□□□ 1.03
CPSF7-209ENST00000463244 SRPRAP08240 638 aaKnown RBP21.49■■□□□ 1.03
CPSF7-209ENST00000463244 PAEPP09466 180 aa21.49■■□□□ 1.03
CPSF7-209ENST00000463244 JUPP14923 745 aa21.49■■□□□ 1.03
CPSF7-209ENST00000463244 CCR5P51681 352 aa21.49■■□□□ 1.03
CPSF7-209ENST00000463244 CLDN6P56747 220 aa21.49■■□□□ 1.03
CPSF7-209ENST00000463244 LRMPQ12912 555 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms