RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 CDH3P22223 829 aa11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 PMLP29590 882 aa11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 LIG4P49917 911 aa11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 ARL4CP56559 192 aa11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 PSMC1P62191 440 aaKnown RBP11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 SPCS2Q15005 226 aa11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 SGO2Q562F6 1265 aa11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 FBXL19Q6PCT2 694 aa11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 RTN4RL1Q86UN2 441 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 NPAS4Q8IUM7 802 aa11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 ARHGEF26Q96DR7 871 aa11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 ACO2Q99798 780 aaKnown RBP11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 HEPHQ9BQS7 1158 aa11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 THTPAQ9BU02 230 aa11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 TDRD1Q9BXT4 1180 aaKnown RBP11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 GRIP2Q9C0E4 1043 aa11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 WWP1Q9H0M0 922 aa11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 TPK1Q9H3S4 243 aa11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 TMEM206Q9H813 350 aa11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 LRFN2Q9ULH4 789 aa11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 COG5Q9UP83 839 aa11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 TNFSF13BQ9Y275 285 aa11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 PCDHB2Q9Y5E7 798 aa11.8□□□□□ -0.52
TRAPPC3-205ENST00000462715 A0A0U1RQF3 1178 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 C9IYK1 514 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 H3BRJ5 948 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 OXSR1O95747 527 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 AOC1P19801 751 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 NFKBIAP25963 317 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 NOP14P78316 857 aaKnown RBP11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 DEFB103AP81534 67 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 TLR1Q15399 786 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 DCAF4L1Q3SXM0 396 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 ADCY4Q8NFM4 1077 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 RAB3IL1Q8TBN0 382 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 KRT35Q92764 455 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 PGBD4Q96DM1 585 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 CYTH2Q99418 400 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 TARS2Q9BW92 718 aaKnown RBP11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 STRA6Q9BX79 667 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 PDZD7Q9H5P4 517 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 STN1Q9H668 368 aaKnown RBP11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 ELAC1Q9H777 363 aaKnown RBP11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 FAM105AQ9NUU6 356 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 ATAD3AQ9NVI7 634 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 ADAMTS6Q9UKP5 1117 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 COLQQ9Y215 455 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 CARD8Q9Y2G2 431 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 PCDHB7Q9Y5E2 793 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 TOM1L1O75674 476 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 EOMESO95936 686 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 PIGRP01833 764 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 CASP5P51878 434 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 FAM189BP81408 668 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 EFHC2Q5JST6 749 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 DCLRE1AQ6PJP8 1040 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 GLYCTKQ8IVS8 523 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 RIN3Q8TB24 985 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 TOP1MTQ969P6 601 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 C7orf26Q96N11 449 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 SH3GL1Q99961 368 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 NUF2Q9BZD4 464 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 THAP2Q9H0W7 228 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 TMEM161AQ9NX61 479 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 EPS15L1Q9UBC2 864 aa11.79□□□□□ -0.52
TRAPPC3-205ENST00000462715 FAM47E-STBD1D6RA91 191 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 TXNDC9O14530 226 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 HOXA2O43364 376 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 FAM189A1O60320 539 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 ZNF623O75123 536 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 USP1O94782 785 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 EDN1P05305 212 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 GZMAP12544 262 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 COMTP21964 271 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 NR2F2P24468 414 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 ADCY8P40145 1251 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 TRIP10Q15642 601 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 ARL13BQ3SXY8 428 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 MPZL3Q6UWV2 235 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 HERC6Q8IVU3 1022 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 MINDY2Q8NBR6 621 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 GPATCH1Q9BRR8 931 aaKnown RBP11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 ZBED2Q9BTP6 218 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 CCDC106Q9BWC9 280 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 CLK4Q9HAZ1 481 aaKnown RBP11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 BCAP29Q9UHQ4 241 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 PSMD13Q9UNM6 376 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 FOXO6A8MYZ6 492 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 EIF3FO00303 357 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 CLDN3O15551 220 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 FGFR1P11362 822 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 PEX2P28328 305 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 CPOXP36551 454 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 PIK3CAP42336 1068 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 ALDH1A3P47895 512 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 C16orf72Q14CZ0 275 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 BMT2Q1RMZ1 405 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 UBXN11Q5T124 520 aa11.78□□□□□ -0.52
TRAPPC3-205ENST00000462715 RARS2Q5T160 578 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms