RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 ADAMTS18Q8TE60 1221 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 PNISRQ8TF01 805 aaKnown RBP3.82□□□□□ -1.8
RFC4-211ENST00000460408 P2RY11Q96G91 374 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 ZNF845Q96IR2 970 aaPredicted RBP3.82□□□□□ -1.8
RFC4-211ENST00000460408 HIC2Q96JB3 615 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 RITA1Q96K30 269 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 COG8Q96MW5 612 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 FYTTD1Q96QD9 318 aaKnown RBP3.82□□□□□ -1.8
RFC4-211ENST00000460408 HERC2P3Q9BVR0 1158 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 ADGRE3Q9BY15 652 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 CHODLQ9H9P2 273 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 PLEKHA2Q9HB19 425 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 SH3BP4Q9P0V3 963 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 PI4KBQ9UBF8 816 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 B3GNT3Q9Y2A9 372 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 PCDHA10Q9Y5I2 948 aa3.82□□□□□ -1.8
RFC4-211ENST00000460408 COPG1Q9Y678 874 aaKnown RBP3.82□□□□□ -1.8
RFC4-211ENST00000460408 STX16-NPEPL1H3BU86 382 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 STX16O14662 325 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 HNRNPRO43390 633 aaKnown RBP3.81□□□□□ -1.8
RFC4-211ENST00000460408 KCNAB3O43448 404 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 ALDOAP04075 364 aaKnown RBP3.81□□□□□ -1.8
RFC4-211ENST00000460408 CSF1P09603 554 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 ACP5P13686 325 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 RXRAP19793 462 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 CNTFP26441 200 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 RBM5P52756 815 aaKnown RBP eCLIP3.81□□□□□ -1.8
RFC4-211ENST00000460408 SLC37A1P57057 533 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 TLE2Q04725 743 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 UBE3AQ05086 875 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 RNASELQ05823 741 aaKnown RBP3.81□□□□□ -1.8
RFC4-211ENST00000460408 CHRNDQ07001 517 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 DMWDQ09019 674 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 SLC14A1Q13336 389 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 CNGA3Q16281 694 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 PROSER3Q2NL68 480 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 LRRC24Q50LG9 513 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 AKNAD1Q5T1N1 836 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 KIAA1614Q5VZ46 1190 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 TMEM65Q6PI78 240 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 SLC39A5Q6ZMH5 540 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 MMS22LQ6ZRQ5 1243 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 PTF1AQ7RTS3 328 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 CHSY1Q86X52 802 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 USP38Q8NB14 1042 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 HS6ST2Q96MM7 605 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 PIGSQ96S52 555 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 SLC22A11Q9NSA0 550 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 ZNF69Q9UC07 566 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 BAG5Q9UL15 447 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 SIRT4Q9Y6E7 314 aaPredicted RBP3.81□□□□□ -1.8
RFC4-211ENST00000460408 WNT6Q9Y6F9 365 aa3.81□□□□□ -1.8
RFC4-211ENST00000460408 SPATA31A5Q5VU36 1347 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 SPATA31A7Q8IWB4 1347 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.8□□□□□ -1.8
RFC4-211ENST00000460408 WDR91A4D1P6 747 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 VWA3AA6NCI4 1184 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 SAC3D1A6NKF1 404 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 POC1B-GALNT4F8VUJ3 575 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 HOXC11O43248 304 aaPredicted RBP3.8□□□□□ -1.8
RFC4-211ENST00000460408 CELA2AP08217 269 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 CHRM5P08912 532 aaPredicted RBP3.8□□□□□ -1.8
RFC4-211ENST00000460408 RFPL3SP0C7P2 107 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 CHN1P15882 459 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 IDUAP35475 653 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 PNPLA4P41247 253 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 KRTAP10-6P60371 365 aaPredicted RBP3.8□□□□□ -1.8
RFC4-211ENST00000460408 SEC23BQ15437 767 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 CTXN3Q4LDR2 81 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 INTS11Q5TA45 600 aaKnown RBP3.8□□□□□ -1.8
RFC4-211ENST00000460408 TMEM88Q6PEY1 159 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 VSTM1Q6UX27 236 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 TFAP2DQ7Z6R9 452 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 RFX6Q8HWS3 928 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 GALNT4Q8N4A0 578 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 FSIP1Q8NA03 581 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 ZNF398Q8TD17 642 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 ARRDC3Q96B67 414 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 MAELQ96JY0 434 aaKnown RBP3.8□□□□□ -1.8
RFC4-211ENST00000460408 GPR78Q96P69 363 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 EIF2AK1Q9BQI3 630 aaKnown RBP3.8□□□□□ -1.8
RFC4-211ENST00000460408 REEP2Q9BRK0 252 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 HTATIP2Q9BUP3 242 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 RMI1Q9H9A7 625 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 NOD2Q9HC29 1040 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 WASH6PQ9NQA3 447 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 ASNSD1Q9NWL6 643 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 MTMR4Q9NYA4 1195 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 CRYL1Q9Y2S2 319 aa3.8□□□□□ -1.8
RFC4-211ENST00000460408 TTC34A8MYJ7 566 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 GRM8O00222 908 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 RRHO14718 337 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 SEPT4O43236 478 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 GCATO75600 419 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 CNTN5O94779 1100 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 CYP2A6P11509 494 aaPredicted RBP3.79□□□□□ -1.8
RFC4-211ENST00000460408 HOXB6P17509 224 aaKnown RBP3.79□□□□□ -1.8
RFC4-211ENST00000460408 PCP4P48539 62 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 B4GALNT1Q00973 533 aa3.79□□□□□ -1.8
RFC4-211ENST00000460408 CDK18Q07002 472 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms