RNA–Protein interactions for RNA: ENST00000456090.2

SMCR2-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 2, humanhuman

TSL 2 BASIC

Gene SMCR2, Length 564 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR2-201ENST00000456090 PPP1R13BQ96KQ4 1090 aa12.84□□□□□ -0.35
SMCR2-201ENST00000456090 BTN2A3PQ96KV6 586 aa12.84□□□□□ -0.35
SMCR2-201ENST00000456090 CPXM1Q96SM3 734 aa12.84□□□□□ -0.35
SMCR2-201ENST00000456090 CLSTN2Q9H4D0 955 aa12.84□□□□□ -0.35
SMCR2-201ENST00000456090 FBRSQ9HAH7 460 aa12.84□□□□□ -0.35
SMCR2-201ENST00000456090 PRSS16Q9NQE7 514 aa12.84□□□□□ -0.35
SMCR2-201ENST00000456090 DNAAF2Q9NVR5 837 aaKnown RBP12.84□□□□□ -0.35
SMCR2-201ENST00000456090 SUN2Q9UH99 717 aa12.84□□□□□ -0.35
SMCR2-201ENST00000456090 AJAP1Q9UKB5 411 aaPredicted RBP12.84□□□□□ -0.35
SMCR2-201ENST00000456090 INTS6Q9UL03 887 aaKnown RBP12.84□□□□□ -0.35
SMCR2-201ENST00000456090 CHD6Q8TD26 2715 aa12.83□□□□□ -0.35
SMCR2-201ENST00000456090 PTPRBP23467 1997 aa12.83□□□□□ -0.35
SMCR2-201ENST00000456090 SYNJ2BP-COX16A0A087WUM0 186 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 H0Y626 953 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 GRAP2O75791 330 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 LUC7L3O95232 432 aaKnown RBP12.83□□□□□ -0.36
SMCR2-201ENST00000456090 TOP3BO95985 862 aaKnown RBP12.83□□□□□ -0.36
SMCR2-201ENST00000456090 DNTTP04053 509 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 CD59P13987 128 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 SPINK2P20155 84 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 TACR2P21452 398 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 ACSL1P33121 698 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 ST8SIA6P61647 398 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 RPS14P62263 151 aaKnown RBP12.83□□□□□ -0.36
SMCR2-201ENST00000456090 PTK2Q05397 1052 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 MAN2A1Q16706 1144 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 DPCR1Q3MIW9 517 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 HSP90AA4PQ58FG1 418 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 ZNF776Q68DI1 518 aaPredicted RBP12.83□□□□□ -0.36
SMCR2-201ENST00000456090 WDTC1Q8N5D0 677 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 SNX19Q92543 992 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 TTC17Q96AE7 1141 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 MYO19Q96H55 970 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 MTG2Q9H4K7 406 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 C6orf106Q9H6K1 298 aaPredicted RBP12.83□□□□□ -0.36
SMCR2-201ENST00000456090 FAM204AQ9H8W3 233 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 SIX2Q9NPC8 291 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 COX16Q9P0S2 106 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 EIF2B4Q9UI10 523 aaKnown RBP12.83□□□□□ -0.36
SMCR2-201ENST00000456090 PCDHGC3Q9UN70 934 aa12.83□□□□□ -0.36
SMCR2-201ENST00000456090 SPAARA0A1B0GVQ0 90 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 KCNU1A8MYU2 1149 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 F5H5T6 163 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 FOXN3O00409 490 aaPredicted RBP12.82□□□□□ -0.36
SMCR2-201ENST00000456090 BCAT2O15382 392 aaPredicted RBP12.82□□□□□ -0.36
SMCR2-201ENST00000456090 SIN3BO75182 1162 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 GJB3O75712 270 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 KRT37O76014 449 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 SEMA4FO95754 770 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 ASLP04424 464 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 GLI1P08151 1106 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 PNMA6AP0CW24 399 aaPredicted RBP12.82□□□□□ -0.36
SMCR2-201ENST00000456090 C7P10643 843 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 PRKCSHP14314 528 aaPredicted RBP12.82□□□□□ -0.36
SMCR2-201ENST00000456090 KRT9P35527 623 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 CTSOP43234 321 aaPredicted RBP12.82□□□□□ -0.36
SMCR2-201ENST00000456090 SIM1P81133 766 aaPredicted RBP12.82□□□□□ -0.36
SMCR2-201ENST00000456090 CDK17Q00537 523 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 ZBTB16Q05516 673 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 SLC14A1Q13336 389 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 EIF4EBP2Q13542 120 aaPredicted RBP12.82□□□□□ -0.36
SMCR2-201ENST00000456090 HNRNPA1L2Q32P51 320 aaKnown RBP12.82□□□□□ -0.36
SMCR2-201ENST00000456090 TTC31Q49AM3 519 aaPredicted RBP12.82□□□□□ -0.36
SMCR2-201ENST00000456090 PITRM1Q5JRX3 1037 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 EFHC1Q5JVL4 640 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 FAM183BPQ6ZVS7 135 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 SLC47A2Q86VL8 602 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 FAM114A1Q8IWE2 563 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 DHX40Q8IX18 779 aaKnown RBP12.82□□□□□ -0.36
SMCR2-201ENST00000456090 DEFB106AQ8N104 65 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 ATP6V0D2Q8N8Y2 350 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 C1orf131Q8NDD1 294 aaKnown RBP12.82□□□□□ -0.36
SMCR2-201ENST00000456090 RNF34Q969K3 372 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 NOX5Q96PH1 765 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 SLC2A13Q96QE2 648 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 ZDHHC5Q9C0B5 715 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 BTBD1Q9H0C5 482 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 PCED1AQ9H1Q7 454 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 RSPH9Q9H1X1 276 aaPredicted RBP12.82□□□□□ -0.36
SMCR2-201ENST00000456090 NDST4Q9H3R1 872 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMCR2-201ENST00000456090 DDIT4Q9NX09 232 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 KIAA1522Q9P206 1035 aaPredicted RBP12.82□□□□□ -0.36
SMCR2-201ENST00000456090 SLC12A6Q9UHW9 1150 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 DNAJC12Q9UKB3 198 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 WASF3Q9UPY6 502 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 CEP83Q9Y592 693 aa12.82□□□□□ -0.36
SMCR2-201ENST00000456090 GOLGA4Q13439 2230 aaKnown RBP12.81□□□□□ -0.36
SMCR2-201ENST00000456090 PES1O00541 588 aaKnown RBP12.81□□□□□ -0.36
SMCR2-201ENST00000456090 HSF2BPO75031 334 aa12.81□□□□□ -0.36
SMCR2-201ENST00000456090 MOCS3O95396 460 aa12.81□□□□□ -0.36
SMCR2-201ENST00000456090 ERBB2P04626 1255 aa12.81□□□□□ -0.36
SMCR2-201ENST00000456090 SLC2A3P11169 496 aa12.81□□□□□ -0.36
SMCR2-201ENST00000456090 ABCB4P21439 1286 aa12.81□□□□□ -0.36
SMCR2-201ENST00000456090 CCR1P32246 355 aa12.81□□□□□ -0.36
SMCR2-201ENST00000456090 CLCN1P35523 988 aa12.81□□□□□ -0.36
SMCR2-201ENST00000456090 NUMBP49757 651 aa12.81□□□□□ -0.36
SMCR2-201ENST00000456090 FAM193AP78312 1265 aa12.81□□□□□ -0.36
SMCR2-201ENST00000456090 ECT2LQ008S8 904 aa12.81□□□□□ -0.36
SMCR2-201ENST00000456090 PTPN20Q4JDL3 420 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms