RNA–Protein interactions for RNA: ENST00000455629.5

CCDC144B-204, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best)

Gene CCDC144B, Length 946 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-204ENST00000455629 CNGA2Q16280 664 aa18.29■□□□□ 0.52
CCDC144B-204ENST00000455629 KIF19Q2TAC6 998 aa18.29■□□□□ 0.52
CCDC144B-204ENST00000455629 FAM133BQ5BKY9 247 aaKnown RBP18.29■□□□□ 0.52
CCDC144B-204ENST00000455629 ZNF776Q68DI1 518 aaPredicted RBP18.29■□□□□ 0.52
CCDC144B-204ENST00000455629 PMF1Q6P1K2 205 aa18.29■□□□□ 0.52
CCDC144B-204ENST00000455629 RFWD3Q6PCD5 774 aa18.29■□□□□ 0.52
CCDC144B-204ENST00000455629 HJURPQ8NCD3 748 aaPredicted RBP18.29■□□□□ 0.52
CCDC144B-204ENST00000455629 BIRC7Q96CA5 298 aa18.29■□□□□ 0.52
CCDC144B-204ENST00000455629 HSFY1Q96LI6 401 aa18.29■□□□□ 0.52
CCDC144B-204ENST00000455629 NT5C1BQ96P26 610 aa18.29■□□□□ 0.52
CCDC144B-204ENST00000455629 DDX50Q9BQ39 737 aaKnown RBP18.29■□□□□ 0.52
CCDC144B-204ENST00000455629 BPIFA3Q9BQP9 254 aa18.29■□□□□ 0.52
CCDC144B-204ENST00000455629 SRRTQ9BXP5 876 aaKnown RBP18.29■□□□□ 0.52
CCDC144B-204ENST00000455629 CCDC86Q9H6F5 360 aaKnown RBP18.29■□□□□ 0.52
CCDC144B-204ENST00000455629 TM9SF3Q9HD45 589 aa18.29■□□□□ 0.52
CCDC144B-204ENST00000455629 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.29■□□□□ 0.52
CCDC144B-204ENST00000455629 ANKRD6Q9Y2G4 727 aa18.29■□□□□ 0.52
CCDC144B-204ENST00000455629 SLCO1B1Q9Y6L6 691 aa18.29■□□□□ 0.52
CCDC144B-204ENST00000455629 TYW5A2RUC4 315 aaKnown RBP18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 M0QYV0 167 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 GABBR2O75899 941 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 DKK1O94907 266 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 FBXO21O94952 628 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 LTFP02788 710 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 SLC6A4P31645 630 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 RGS7P49802 495 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 ZNF165P49910 485 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 TBX4P57082 545 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 SFSWAPQ12872 951 aaKnown RBP18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 USP30Q70CQ3 517 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 TMPRSS7Q7RTY8 843 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 MFN1Q8IWA4 741 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 FIBINQ8TAL6 211 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 WFDC5Q8TCV5 224 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 IGSF8Q969P0 613 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 TTC17Q96AE7 1141 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 RSPH9Q9H1X1 276 aaPredicted RBP18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 TSPY26PQ9H489 355 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 NCKAP1Q9Y2A7 1128 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 PCDHB4Q9Y5E5 795 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 SNX11Q9Y5W9 270 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 ACACAQ13085 2346 aa18.28■□□□□ 0.52
CCDC144B-204ENST00000455629 TMEM131Q92545 1883 aa18.27■□□□□ 0.52
CCDC144B-204ENST00000455629 GOLGA6L7A0A1B0GV03 622 aa18.27■□□□□ 0.52
CCDC144B-204ENST00000455629 PCDHGA12O60330 932 aa18.27■□□□□ 0.52
CCDC144B-204ENST00000455629 FSBPO95073 299 aa18.27■□□□□ 0.52
CCDC144B-204ENST00000455629 FGFR1OPO95684 399 aaKnown RBP18.27■□□□□ 0.52
CCDC144B-204ENST00000455629 ASLP04424 464 aa18.27■□□□□ 0.52
CCDC144B-204ENST00000455629 ST8SIA6P61647 398 aa18.27■□□□□ 0.52
CCDC144B-204ENST00000455629 MYL5Q02045 173 aa18.27■□□□□ 0.52
CCDC144B-204ENST00000455629 CETN1Q12798 172 aa18.27■□□□□ 0.52
CCDC144B-204ENST00000455629 NNTQ13423 1086 aa18.27■□□□□ 0.52
CCDC144B-204ENST00000455629 TPD52L1Q16890 204 aaPredicted RBP18.27■□□□□ 0.52
CCDC144B-204ENST00000455629 PPM1KQ8N3J5 372 aa18.27■□□□□ 0.52
CCDC144B-204ENST00000455629 AOPEPQ8N6M6 819 aa18.27■□□□□ 0.52
CCDC144B-204ENST00000455629 KDM1BQ8NB78 822 aa18.27■□□□□ 0.52
CCDC144B-204ENST00000455629 LMLNQ96KR4 655 aa18.27■□□□□ 0.52
CCDC144B-204ENST00000455629 ZSWIM1Q9BR11 485 aa18.27■□□□□ 0.52
CCDC144B-204ENST00000455629 TOR4AQ9NXH8 423 aa18.27■□□□□ 0.52
CCDC144B-204ENST00000455629 ADAMTS20P59510 1910 aa18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 PIK3R2O00459 728 aa18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 DFNA5O60443 496 aa18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 RNASEH1O60930 286 aaKnown RBP18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 ATXN1LP0C7T5 689 aaKnown RBP18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 GRK6P43250 576 aa18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 CCT8P50990 548 aa18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 ARID5BQ14865 1188 aa18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 NCAPHQ15003 741 aa18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 HNRNPA1L2Q32P51 320 aaKnown RBP18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 NADSYN1Q6IA69 706 aa18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 CCDC117Q8IWD4 279 aaPredicted RBP18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 CLEC4CQ8WTT0 213 aa18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 MYO19Q96H55 970 aa18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 SERPINB11Q96P15 392 aa18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 PABPC3Q9H361 631 aaKnown RBP18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 THAP9Q9H5L6 903 aa18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 STIM2Q9P246 746 aa18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 TLR6Q9Y2C9 796 aa18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 GPSM3Q9Y4H4 160 aa18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 LAMA5O15230 3695 aa18.26■□□□□ 0.51
CCDC144B-204ENST00000455629 APC2O95996 2303 aa18.25■□□□□ 0.51
CCDC144B-204ENST00000455629 RNF225M0QZC1 329 aaPredicted RBP18.25■□□□□ 0.51
CCDC144B-204ENST00000455629 P4HA2O15460 535 aa18.25■□□□□ 0.51
CCDC144B-204ENST00000455629 SART1O43290 800 aaKnown RBP18.25■□□□□ 0.51
CCDC144B-204ENST00000455629 TNFSF14O43557 240 aa18.25■□□□□ 0.51
CCDC144B-204ENST00000455629 HOXB3P14651 431 aaPredicted RBP18.25■□□□□ 0.51
CCDC144B-204ENST00000455629 BRD2P25440 801 aaKnown RBP18.25■□□□□ 0.51
CCDC144B-204ENST00000455629 CSKP41240 450 aa18.25■□□□□ 0.51
CCDC144B-204ENST00000455629 CTSKP43235 329 aa18.25■□□□□ 0.51
CCDC144B-204ENST00000455629 GCNT1Q02742 428 aa18.25■□□□□ 0.51
CCDC144B-204ENST00000455629 CDH18Q13634 790 aa18.25■□□□□ 0.51
CCDC144B-204ENST00000455629 COL9A2Q14055 689 aaPredicted RBP18.25■□□□□ 0.51
CCDC144B-204ENST00000455629 IQCB1Q15051 598 aa18.25■□□□□ 0.51
CCDC144B-204ENST00000455629 INAVAQ3KP66 663 aa18.25■□□□□ 0.51
CCDC144B-204ENST00000455629 CCDC40Q4G0X9 1142 aa18.25■□□□□ 0.51
CCDC144B-204ENST00000455629 KIAA0895LQ68EN5 471 aa18.25■□□□□ 0.51
CCDC144B-204ENST00000455629 ADAT2Q7Z6V5 191 aaKnown RBP18.25■□□□□ 0.51
CCDC144B-204ENST00000455629 IRF2BP1Q8IU81 584 aa18.25■□□□□ 0.51
CCDC144B-204ENST00000455629 DHX40Q8IX18 779 aaKnown RBP18.25■□□□□ 0.51
CCDC144B-204ENST00000455629 GALNT15Q8N3T1 639 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms