RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 SEC61A2Q9H9S3 476 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 CYP4F11Q9HBI6 524 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 TMEM9BQ9NQ34 198 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 SNTG2Q9NY99 539 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 RGL1Q9NZL6 768 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 ARHGAP20Q9P2F6 1191 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 AFF4Q9UHB7 1163 aaKnown RBP4.03□□□□□ -1.76
RBM39-220ENST00000455343 KLK13Q9UKR3 277 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 DSEQ9UL01 958 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 INSL5Q9Y5Q6 135 aa4.03□□□□□ -1.76
RBM39-220ENST00000455343 NID2Q14112 1375 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 EVPLQ92817 2033 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 NOTCH4Q99466 2003 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 COL4A2P08572 1712 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 TRAV20A0A0B4J274 112 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 KLF18A0A0U1RQI7 1052 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 CCDC196A0A1B0GTZ2 297 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 CCDC194A0A1B0GVG4 234 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 BLACEA4D250 179 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 FAM47E-STBD1D6RA91 191 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 H0Y626 953 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 I3L4J1 428 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 PRRG1O14668 218 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 SYN3O14994 580 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 DCLK1O15075 740 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 TBX3O15119 743 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 MUSKO15146 869 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 SLC37A4O43826 429 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 RHOBTB1O94844 696 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 TRIM16O95361 564 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 VNN2O95498 520 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 IL18BPO95998 194 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 EDN1P05305 212 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 ENO2P09104 434 aaPredicted RBP4.02□□□□□ -1.77
RBM39-220ENST00000455343 IFNAR1P17181 557 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 BRCC3P46736 316 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 RARRES1P49788 294 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 KPNA1P52294 538 aaPredicted RBP4.02□□□□□ -1.77
RBM39-220ENST00000455343 CREB5Q02930 508 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 SCAPQ12770 1279 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 TWF1Q12792 350 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 IFRD2Q12894 506 aaPredicted RBP4.02□□□□□ -1.77
RBM39-220ENST00000455343 SEMA3BQ13214 749 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 KARSQ15046 597 aaKnown RBP4.02□□□□□ -1.77
RBM39-220ENST00000455343 ELF2Q15723 593 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 ADCK5Q3MIX3 580 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 XKR9Q5GH70 373 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 STXBP5Q5T5C0 1151 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 PMS2CLQ68D20 193 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 CDCA2Q69YH5 1023 aaPredicted RBP4.02□□□□□ -1.77
RBM39-220ENST00000455343 PPP4R3AQ6IN85 833 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 FSTL4Q6MZW2 842 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 ALKAL1Q6UXT8 129 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 GAREM2Q75VX8 874 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 SYT13Q7L8C5 426 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 GPR155Q7Z3F1 870 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 RASSF3Q86WH2 238 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 FBXL16Q8N461 479 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 STPG3Q8N7X2 389 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 DEFB124Q8NES8 71 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 CCDC148Q8NFR7 591 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 Q8TCH9 128 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 ZFYVE19Q96K21 471 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 UROC1Q96N76 676 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 SORCS2Q96PQ0 1159 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 ZNF747Q9BV97 191 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 RNF26Q9BY78 433 aaPredicted RBP4.02□□□□□ -1.77
RBM39-220ENST00000455343 AGXT2Q9BYV1 514 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 VPS11Q9H270 941 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 PDZD7Q9H5P4 517 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 ZSWIM4Q9H7M6 989 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 IPPKQ9H8X2 491 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 FBRSL1Q9HCM7 1045 aaKnown RBP4.02□□□□□ -1.77
RBM39-220ENST00000455343 SH3GLB2Q9NR46 395 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 ASAH2Q9NR71 780 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 PRMT7Q9NVM4 692 aaPredicted RBP4.02□□□□□ -1.77
RBM39-220ENST00000455343 POLR3BQ9NW08 1133 aaPredicted RBP4.02□□□□□ -1.77
RBM39-220ENST00000455343 VPS54Q9P1Q0 977 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 ANKFY1Q9P2R3 1169 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 DDX25Q9UHL0 483 aaKnown RBP4.02□□□□□ -1.77
RBM39-220ENST00000455343 EVLQ9UI08 416 aaPredicted RBP4.02□□□□□ -1.77
RBM39-220ENST00000455343 FBXL5Q9UKA1 691 aa4.02□□□□□ -1.77
RBM39-220ENST00000455343 MIA3Q5JRA6 1907 aa4.01□□□□□ -1.77
RBM39-220ENST00000455343 SDK1Q7Z5N4 2213 aa4.01□□□□□ -1.77
RBM39-220ENST00000455343 DOCK6Q96HP0 2047 aa4.01□□□□□ -1.77
RBM39-220ENST00000455343 SMIM28A0A1B0GU29 152 aa4.01□□□□□ -1.77
RBM39-220ENST00000455343 H7C4K7 107 aa4.01□□□□□ -1.77
RBM39-220ENST00000455343 ACOT7O00154 380 aa4.01□□□□□ -1.77
RBM39-220ENST00000455343 ACKR2O00590 384 aa4.01□□□□□ -1.77
RBM39-220ENST00000455343 OAZ2O95190 189 aa4.01□□□□□ -1.77
RBM39-220ENST00000455343 PRAMEF12O95522 483 aa4.01□□□□□ -1.77
RBM39-220ENST00000455343 APBB3O95704 486 aa4.01□□□□□ -1.77
RBM39-220ENST00000455343 PRKCBP05771 671 aa4.01□□□□□ -1.77
RBM39-220ENST00000455343 MYL4P12829 197 aa4.01□□□□□ -1.77
RBM39-220ENST00000455343 XRCC6P12956 609 aaKnown RBP eCLIP4.01□□□□□ -1.77
RBM39-220ENST00000455343 ACVRL1P37023 503 aa4.01□□□□□ -1.77
RBM39-220ENST00000455343 GDF5P43026 501 aa4.01□□□□□ -1.77
RBM39-220ENST00000455343 EVCP57679 992 aa4.01□□□□□ -1.77
RBM39-220ENST00000455343 FAM193AP78312 1265 aa4.01□□□□□ -1.77
RBM39-220ENST00000455343 GRSF1Q12849 480 aaKnown RBP eCLIP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms