RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-208	ENST00000444677	MTG2	Q9H4K7	406 aa		13.99	□□□□□ -0.17
GARNL3-208	ENST00000444677	CD93	Q9NPY3	652 aa		13.99	□□□□□ -0.17
GARNL3-208	ENST00000444677	RRN3	Q9NYV6	651 aa		13.99	□□□□□ -0.17
GARNL3-208	ENST00000444677	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
GARNL3-208	ENST00000444677	VANGL2	Q9ULK5	521 aa		13.99	□□□□□ -0.17
GARNL3-208	ENST00000444677	MYOF	Q9NZM1	2061 aa		13.99	□□□□□ -0.17
GARNL3-208	ENST00000444677	C2CD4B	A6NLJ0	364 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677		H0Y626	953 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	DDX3X	O00571	662 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	CNTN5	O94779	1100 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	ALDH1A2	O94788	518 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	ENDOD1	O94919	500 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	LUC7L3	O95232	432 aa	Known RBP	13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	CALB1	P05937	261 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	CCDC172	P0C7W6	258 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	KRT3	P12035	628 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	RRM1	P23921	792 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	CTSO	P43234	321 aa	Predicted RBP	13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	ENPP2	Q13822	863 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	PTPRN	Q16849	979 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	CDO1	Q16878	200 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	PLK5	Q496M5	336 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	FIGN	Q5HY92	759 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	CCAR2	Q8N163	923 aa	Known RBP	13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	OR52K2	Q8NGK3	314 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	WFIKKN2	Q8TEU8	576 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	UCMA	Q8WVF2	138 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	RUBCN	Q92622	972 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	RPRD1A	Q96P16	312 aa	Predicted RBP	13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	EDEM3	Q9BZQ6	932 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	DUSP15	Q9H1R2	295 aa	Predicted RBP	13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	PARD6A	Q9NPB6	346 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	NCDN	Q9UBB6	729 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	MBD1	Q9UIS9	605 aa	Predicted RBP	13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	RALGAPA1	Q6GYQ0	2036 aa		13.98	□□□□□ -0.17
GARNL3-208	ENST00000444677	ATMIN	O43313	823 aa	Predicted RBP	13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	TIMM44	O43615	452 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	F9	P00740	461 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	NDUFV2	P19404	249 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	TGM1	P22735	817 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	MZF1	P28698	734 aa	Predicted RBP	13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	RDX	P35241	583 aa	Known RBP	13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	CSK	P41240	450 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	PRKCI	P41743	596 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	GSC	P56915	257 aa	Predicted RBP	13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	RPL7A	P62424	266 aa	Known RBP	13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	C1QBP	Q07021	282 aa	Known RBP	13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	KLHL30	Q0D2K2	578 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	CDH18	Q13634	790 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	EIF4H	Q15056	248 aa	Known RBP	13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	CCDC6	Q16204	474 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	MAP7D1	Q3KQU3	841 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	USP39	Q53GS9	565 aa	Known RBP	13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	ALF	Q53S48	1182 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	PITRM1	Q5JRX3	1037 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	BRMS1L	Q5PSV4	323 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	HGSNAT	Q68CP4	663 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	ARC	Q7LC44	396 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	KIAA2013	Q8IYS2	634 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	ZNF683	Q8IZ20	524 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	AHI1	Q8N157	1196 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	TTC17	Q96AE7	1141 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	SELENOO	Q9BVL4	669 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677	RAB23	Q9ULC3	237 aa		13.97	□□□□□ -0.17
GARNL3-208	ENST00000444677		A0A1W2PQJ5	194 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	TYW5	A2RUC4	315 aa	Known RBP	13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	SIGLEC16	A6NMB1	481 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	AP5Z1	O43299	807 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	GYPC	P04921	128 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	EPHX1	P07099	455 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	PLEK	P08567	350 aa	Predicted RBP	13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	DLD	P09622	509 aa	Known RBP	13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	POLR2E	P19388	210 aa	Known RBP	13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	SDC4	P31431	198 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	CASP14	P31944	242 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	P2RY2	P41231	377 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	OGDH	Q02218	1023 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	FNDC3B	Q53EP0	1204 aa	Known RBP	13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	PPP1R15B	Q5SWA1	713 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	LAIR1	Q6GTX8	287 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	CXorf57	Q6NSI4	855 aa	Known RBP	13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	DNAJC24	Q6P3W2	148 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	DEFB119	Q8N690	84 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	C3orf20	Q8ND61	904 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	MYO19	Q96H55	970 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	MRGPRX3	Q96LB0	322 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	MCEE	Q96PE7	176 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	NUP58	Q9BVL2	599 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	MKRN2	Q9H000	416 aa	Known RBP	13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	TMEM245	Q9H330	911 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	MPP6	Q9NZW5	540 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	CAPN11	Q9UMQ6	739 aa		13.96	□□□□□ -0.17
GARNL3-208	ENST00000444677	RIF1	Q5UIP0	2472 aa	Known RBP	13.96	□□□□□ -0.18
GARNL3-208	ENST00000444677	DRGX	A6NNA5	263 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	CCP110	O43303	1012 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	SRGAP2	O75044	1071 aa		13.95	□□□□□ -0.18
GARNL3-208	ENST00000444677	FTL	P02792	175 aa	Predicted RBP	13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms