RNA–Protein interactions for RNA: ENST00000443509.6

PRUNE2-208, Transcript of prune homolog 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRUNE2, Length 12,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-208ENST00000443509 PSMD4P55036 377 aaKnown RBP4.79□□□□□ -1.64
PRUNE2-208ENST00000443509 MSLNQ13421 630 aaPredicted RBP4.79□□□□□ -1.64
PRUNE2-208ENST00000443509 HERC3Q15034 1050 aa4.79□□□□□ -1.64
PRUNE2-208ENST00000443509 MFSD14CQ5VZR4 134 aa4.79□□□□□ -1.64
PRUNE2-208ENST00000443509 KLHL17Q6TDP4 642 aa4.79□□□□□ -1.64
PRUNE2-208ENST00000443509 ELMOD1Q8N336 334 aa4.79□□□□□ -1.64
PRUNE2-208ENST00000443509 RASGEF1CQ8N431 466 aa4.79□□□□□ -1.64
PRUNE2-208ENST00000443509 EPS8L1Q8TE68 723 aa4.79□□□□□ -1.64
PRUNE2-208ENST00000443509 NAT14Q8WUY8 206 aa4.79□□□□□ -1.64
PRUNE2-208ENST00000443509 ATL1Q8WXF7 558 aa4.79□□□□□ -1.64
PRUNE2-208ENST00000443509 HES6Q96HZ4 224 aa4.79□□□□□ -1.64
PRUNE2-208ENST00000443509 MTMR12Q9C0I1 747 aa4.79□□□□□ -1.64
PRUNE2-208ENST00000443509 DDX47Q9H0S4 455 aaKnown RBP4.79□□□□□ -1.64
PRUNE2-208ENST00000443509 RNPEPQ9H4A4 650 aa4.79□□□□□ -1.64
PRUNE2-208ENST00000443509 JAG2Q9Y219 1238 aa4.79□□□□□ -1.64
PRUNE2-208ENST00000443509 USP27XA6NNY8 438 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 ZNF487B1APH4 448 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 RALAP11233 206 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 SLCO1A2P46721 670 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 NCKAP1LP55160 1127 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 PDIA2Q13087 525 aaKnown RBP4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 LRRC41Q15345 812 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 CLEC16AQ2KHT3 1053 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 RDH13Q8NBN7 331 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 SLC30A5Q8TAD4 765 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 MBOAT7Q96N66 472 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 TMEM79Q9BSE2 394 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 LRRC1Q9BTT6 524 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 LRRC40Q9H9A6 602 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 DCTN4Q9UJW0 460 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 KRT87PA6NCN2 255 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 TMEM114B3SHH9 223 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 GLRA3O75311 464 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 CYP1A2P05177 515 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 PRKCBP05771 671 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 RBP1P09455 135 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 GPD1P21695 349 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 CDH6P55285 790 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 EIF3EP60228 445 aaKnown RBP4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 PRKCEQ02156 737 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 ANKRD26P1Q6NSI1 321 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 LHFPL3Q86UP9 236 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 SLC26A11Q86WA9 606 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 ERO1BQ86YB8 467 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 ABRAQ8N0Z2 381 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 OR8H2Q8N162 312 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 SYNE4Q8N205 404 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 TBC1D19Q8N5T2 526 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 LINC00116Q8NCU8 138 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 SLC35C1Q96A29 364 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 MSANTD3Q96H12 275 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 SCYL1Q96KG9 808 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 RIC8BQ9NVN3 520 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 ZMAT5Q9UDW3 170 aaKnown RBP4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 CLDN25C9JDP6 229 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 KBTBD13C9JR72 458 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 TGM6O95932 706 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 MAPK1P28482 360 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 GTF2BQ00403 316 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 SPIRE1Q08AE8 756 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 TMTC4Q5T4D3 741 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 DPH6Q7L8W6 267 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 HAVCR1Q96D42 359 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 MMP19Q99542 508 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 TRPV5Q9NQA5 729 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 ZNF70Q9UC06 446 aaPredicted RBP4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 GIT1Q9Y2X7 761 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 LY75O60449 1722 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 SRP72O76094 671 aaKnown RBP4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 PSMG1O95456 288 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 CASP4P49662 377 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 CCT8P50990 548 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 OTUD4Q01804 1114 aaKnown RBP4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 BROXQ5VW32 411 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 SLC9A4Q6AI14 798 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 LRRC55Q6ZSA7 311 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 NUDT18Q6ZVK8 323 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 EXOC3L1Q86VI1 746 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 CLVS1Q8IUQ0 354 aaPredicted RBP4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 TBC1D15Q8TC07 691 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 MANSC1Q9H8J5 431 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 ZC3H4Q9UPT8 1303 aaKnown RBP4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 GJA3Q9Y6H8 435 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 WRBO00258 174 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 TGDSO95455 350 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 CCNE2O96020 404 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 HOXA13P31271 388 aaPredicted RBP4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 USP46P62068 366 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 MAD2L1Q13257 205 aaPredicted RBP4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 ITPK1Q13572 414 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 ANKRD13CQ8N6S4 541 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 BBS4Q96RK4 519 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 WRNIP1Q96S55 665 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 DBNDD1Q9H9R9 158 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 EBF2Q9HAK2 575 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 TRNAU1APQ9NX07 287 aaKnown RBP4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 DDX60LQ5H9U9 1706 aaKnown RBP4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 SDR42E2A6NKP2 422 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 RAD51CO43502 376 aa4.78□□□□□ -1.64
PRUNE2-208ENST00000443509 GDF11O95390 407 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms