RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 TUSC3Q13454 348 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 CRYMQ14894 314 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 CTC1Q2NKJ3 1217 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 TIGD5Q53EQ6 642 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 GNASQ5JWF2 1037 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 GRTP1Q5TC63 336 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 CCSAPQ6IQ19 270 aaPredicted RBP8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 DENND5BQ6ZUT9 1274 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 HFE2Q6ZVN8 426 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 TBC1D1Q86TI0 1168 aaPredicted RBP8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 TMEM135Q86UB9 458 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 SAPCD2Q86UD0 394 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 LCA5Q86VQ0 697 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 TAB3Q8N5C8 712 aaPredicted RBP8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 LZTR1Q8N653 840 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 SLC7A14Q8TBB6 771 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 DEPDC1BQ8WUY9 529 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 SKA1Q96BD8 255 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 ERP27Q96DN0 273 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 MRRFQ96E11 262 aaKnown RBP8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 SUSD3Q96L08 255 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 CPNE1Q99829 537 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 MAGEB5Q9BZ81 275 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 GBA3Q9H227 469 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 FAM96AQ9H5X1 160 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 LRRC40Q9H9A6 602 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 KCNK13Q9HB14 408 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 DMAP1Q9NPF5 467 aaPredicted RBP8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 DCDC2Q9UHG0 476 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 SORCS3Q9UPU3 1222 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 FAM237BA0A1B0GVD1 139 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 I3L4J1 428 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 GLRA3O75311 464 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 CABYRO75952 493 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 USP1O94782 785 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 POLBP06746 335 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 PTPN4P29074 926 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 POLD2P49005 469 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 MNAT1P51948 309 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 ARFIP2P53365 341 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 KCNJ2P63252 427 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 AP1B1Q10567 949 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 TBCCQ15814 346 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 TRIM71Q2Q1W2 868 aaKnown RBP8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 TEX44Q53QW1 395 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 PLEKHG4Q58EX7 1191 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 WASHC2DQ5SRD0 308 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 TRMT10BQ6PF06 316 aaKnown RBP8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 PACS1Q6VY07 963 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 CDHR3Q6ZTQ4 885 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 CCDC91Q7Z6B0 441 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 CLNKQ7Z7G1 428 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 ZNF598Q86UK7 904 aaKnown RBP8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 MPP5Q8N3R9 675 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 RNF169Q8NCN4 708 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 C3orf58Q8NDZ4 430 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 ZSCAN18Q8TBC5 510 aaPredicted RBP8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 STON2Q8WXE9 905 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 PTPRN2Q92932 1015 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 MYLPFQ96A32 169 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 E2F7Q96AV8 911 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 SLC7A6OSQ96CW6 309 aaPredicted RBP8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 ABHD8Q96I13 439 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 HHIPL1Q96JK4 782 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 NSMCE4AQ9NXX6 385 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 ZFP69BQ9UJL9 534 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 MFHAS1Q9Y4C4 1052 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 MAD1L1Q9Y6D9 718 aa8.42□□□□□ -1.06
SPIRE1-204ENST00000440472 WDR27A2RRH5 827 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 WASH4PA8MWX3 477 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 FAM155AB1AL88 458 aaPredicted RBP8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 GOLGA8RI6L899 631 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 FGF10O15520 208 aaPredicted RBP8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 KRT16P08779 473 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 PSMB4P28070 264 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 GP5P40197 560 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 GARSP41250 739 aaKnown RBP8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 CDK7P50613 346 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 SCNN1GP51170 649 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 CCNG1P51959 295 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 CSE1LP55060 971 aaKnown RBP8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 MANEALQ5VSG8 457 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 THEM5Q8N1Q8 247 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 PDCD7Q8N8D1 485 aaKnown RBP8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 STKLD1Q8NE28 680 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 NDRG1Q92597 394 aaKnown RBP8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 ATP2A3Q93084 1043 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 TEKT5Q96M29 485 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 KLF6Q99612 283 aaPredicted RBP8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 GORASP1Q9BQQ3 440 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 MMADHCQ9H3L0 296 aaPredicted RBP8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 WDCPQ9H6R7 721 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 AGO3Q9H9G7 860 aaKnown RBP8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 RNF19AQ9NV58 838 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 THAP1Q9NVV9 213 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 BFARQ9NZS9 450 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 PADI3Q9ULW8 664 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 PCDHB8Q9UN66 801 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 NLRC5Q86WI3 1866 aa8.41□□□□□ -1.06
SPIRE1-204ENST00000440472 MEIS3P2A8K0S8 358 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms