RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 APBA1Q02410 837 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 SLC12A1Q13621 1099 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 RAPGEF1Q13905 1077 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 HNRNPDQ14103 355 aaKnown RBP19.46■□□□□ 0.71
CCDC78-204ENST00000439619 DCAF12L1Q5VU92 463 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 RAP1GAP2Q684P5 730 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 ZNF776Q68DI1 518 aaPredicted RBP19.46■□□□□ 0.71
CCDC78-204ENST00000439619 FAM124AQ86V42 546 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 DEFB106AQ8N104 65 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 CFAP52Q8N1V2 620 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 ZNF366Q8N895 744 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 WFDC5Q8TCV5 224 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 BTBD1Q9H0C5 482 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 PRSS16Q9NQE7 514 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 TMEM51Q9NW97 253 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 SCML1Q9UN30 329 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 PLXND1Q9Y4D7 1925 aa19.46■□□□□ 0.71
CCDC78-204ENST00000439619 SYNJ2BP-COX16A0A087WUM0 186 aa19.45■□□□□ 0.7
CCDC78-204ENST00000439619 FOXN3O00409 490 aaPredicted RBP19.45■□□□□ 0.7
CCDC78-204ENST00000439619 IGLV3-25P01717 112 aa19.45■□□□□ 0.7
CCDC78-204ENST00000439619 SRPRAP08240 638 aaKnown RBP19.45■□□□□ 0.7
CCDC78-204ENST00000439619 EEF1GP26641 437 aaKnown RBP19.45■□□□□ 0.7
CCDC78-204ENST00000439619 MAOBP27338 520 aa19.45■□□□□ 0.7
CCDC78-204ENST00000439619 SLC14A1Q13336 389 aa19.45■□□□□ 0.7
CCDC78-204ENST00000439619 KCNJ12Q14500 433 aa19.45■□□□□ 0.7
CCDC78-204ENST00000439619 HSP90AA4PQ58FG1 418 aa19.45■□□□□ 0.7
CCDC78-204ENST00000439619 PITRM1Q5JRX3 1037 aa19.45■□□□□ 0.7
CCDC78-204ENST00000439619 TMEM35BQ8NCS4 154 aa19.45■□□□□ 0.7
CCDC78-204ENST00000439619 MSANTD4Q8NCY6 345 aa19.45■□□□□ 0.7
CCDC78-204ENST00000439619 C1orf131Q8NDD1 294 aaKnown RBP19.45■□□□□ 0.7
CCDC78-204ENST00000439619 DEFB124Q8NES8 71 aa19.45■□□□□ 0.7
CCDC78-204ENST00000439619 GANCQ8TET4 914 aa19.45■□□□□ 0.7
CCDC78-204ENST00000439619 SNX19Q92543 992 aa19.45■□□□□ 0.7
CCDC78-204ENST00000439619 SLC2A13Q96QE2 648 aa19.45■□□□□ 0.7
CCDC78-204ENST00000439619 SIX2Q9NPC8 291 aa19.45■□□□□ 0.7
CCDC78-204ENST00000439619 RRN3Q9NYV6 651 aa19.45■□□□□ 0.7
CCDC78-204ENST00000439619 COX16Q9P0S2 106 aa19.45■□□□□ 0.7
CCDC78-204ENST00000439619 PAXBP1Q9Y5B6 917 aa19.45■□□□□ 0.7
CCDC78-204ENST00000439619 GIPC1O14908 333 aa19.44■□□□□ 0.7
CCDC78-204ENST00000439619 BCAT2O15382 392 aaPredicted RBP19.44■□□□□ 0.7
CCDC78-204ENST00000439619 RPS14P62263 151 aaKnown RBP19.44■□□□□ 0.7
CCDC78-204ENST00000439619 ECT2LQ008S8 904 aa19.44■□□□□ 0.7
CCDC78-204ENST00000439619 SLC6A3Q01959 620 aa19.44■□□□□ 0.7
CCDC78-204ENST00000439619 SEMA3BQ13214 749 aa19.44■□□□□ 0.7
CCDC78-204ENST00000439619 TAF5Q15542 800 aa19.44■□□□□ 0.7
CCDC78-204ENST00000439619 HNRNPA1L2Q32P51 320 aaKnown RBP19.44■□□□□ 0.7
CCDC78-204ENST00000439619 IL27RAQ6UWB1 636 aa19.44■□□□□ 0.7
CCDC78-204ENST00000439619 SND1Q7KZF4 910 aaKnown RBP eCLIP19.44■□□□□ 0.7
CCDC78-204ENST00000439619 SLC47A2Q86VL8 602 aa19.44■□□□□ 0.7
CCDC78-204ENST00000439619 FAM71AQ8IYT1 594 aa19.44■□□□□ 0.7
CCDC78-204ENST00000439619 ZCCHC9Q8N567 271 aaKnown RBP19.44■□□□□ 0.7
CCDC78-204ENST00000439619 WDTC1Q8N5D0 677 aa19.44■□□□□ 0.7
CCDC78-204ENST00000439619 GBP4Q96PP9 640 aa19.44■□□□□ 0.7
CCDC78-204ENST00000439619 SGK2Q9HBY8 427 aa19.44■□□□□ 0.7
CCDC78-204ENST00000439619 FSCN3Q9NQT6 498 aa19.44■□□□□ 0.7
CCDC78-204ENST00000439619 DNAAF2Q9NVR5 837 aaKnown RBP19.44■□□□□ 0.7
CCDC78-204ENST00000439619 TARSL2A2RTX5 802 aaKnown RBP19.43■□□□□ 0.7
CCDC78-204ENST00000439619 GOLGA6L22H0YM25 854 aa19.43■□□□□ 0.7
CCDC78-204ENST00000439619 GRAP2O75791 330 aa19.43■□□□□ 0.7
CCDC78-204ENST00000439619 SEMA4FO95754 770 aa19.43■□□□□ 0.7
CCDC78-204ENST00000439619 NOS2P35228 1153 aa19.43■□□□□ 0.7
CCDC78-204ENST00000439619 CLCN1P35523 988 aa19.43■□□□□ 0.7
CCDC78-204ENST00000439619 SULT2A1Q06520 285 aa19.43■□□□□ 0.7
CCDC78-204ENST00000439619 NME3Q13232 169 aa19.43■□□□□ 0.7
CCDC78-204ENST00000439619 DRAP1Q14919 205 aaPredicted RBP19.43■□□□□ 0.7
CCDC78-204ENST00000439619 TCP11X2Q5H9J9 407 aa19.43■□□□□ 0.7
CCDC78-204ENST00000439619 MIIPQ5JXC2 388 aa19.43■□□□□ 0.7
CCDC78-204ENST00000439619 OLFML1Q6UWY5 402 aa19.43■□□□□ 0.7
CCDC78-204ENST00000439619 FAM183BPQ6ZVS7 135 aa19.43■□□□□ 0.7
CCDC78-204ENST00000439619 SLC26A9Q7LBE3 791 aa19.43■□□□□ 0.7
CCDC78-204ENST00000439619 RSPH9Q9H1X1 276 aaPredicted RBP19.43■□□□□ 0.7
CCDC78-204ENST00000439619 XPO7Q9UIA9 1087 aaKnown RBP19.43■□□□□ 0.7
CCDC78-204ENST00000439619 STAP1Q9ULZ2 295 aa19.43■□□□□ 0.7
CCDC78-204ENST00000439619 ERVW-1Q9UQF0 538 aa19.43■□□□□ 0.7
CCDC78-204ENST00000439619 NUP205Q92621 2012 aa19.42■□□□□ 0.7
CCDC78-204ENST00000439619 EDDM13A0A1B0GTR0 161 aa19.42■□□□□ 0.7
CCDC78-204ENST00000439619 A0A1B0GVM2 712 aa19.42■□□□□ 0.7
CCDC78-204ENST00000439619 TCAF2A6NFQ2 919 aa19.42■□□□□ 0.7
CCDC78-204ENST00000439619 DAB1O75553 588 aa19.42■□□□□ 0.7
CCDC78-204ENST00000439619 C7P10643 843 aa19.42■□□□□ 0.7
CCDC78-204ENST00000439619 FOXC1Q12948 553 aa19.42■□□□□ 0.7
CCDC78-204ENST00000439619 GRIK2Q13002 908 aa19.42■□□□□ 0.7
CCDC78-204ENST00000439619 ARID5BQ14865 1188 aa19.42■□□□□ 0.7
CCDC78-204ENST00000439619 TEAD4Q15561 434 aa19.42■□□□□ 0.7
CCDC78-204ENST00000439619 FSCBQ5H9T9 825 aa19.42■□□□□ 0.7
CCDC78-204ENST00000439619 KLHDC7AQ5VTJ3 777 aa19.42■□□□□ 0.7
CCDC78-204ENST00000439619 CLEC17AQ6ZS10 378 aa19.42■□□□□ 0.7
CCDC78-204ENST00000439619 USP30Q70CQ3 517 aa19.42■□□□□ 0.7
CCDC78-204ENST00000439619 ZNF397Q8NF99 534 aaPredicted RBP19.42■□□□□ 0.7
CCDC78-204ENST00000439619 LMLNQ96KR4 655 aa19.42■□□□□ 0.7
CCDC78-204ENST00000439619 RPRD1AQ96P16 312 aaPredicted RBP19.42■□□□□ 0.7
CCDC78-204ENST00000439619 EIF2B4Q9UI10 523 aaKnown RBP19.42■□□□□ 0.7
CCDC78-204ENST00000439619 PCDHB9Q9Y5E1 797 aa19.42■□□□□ 0.7
CCDC78-204ENST00000439619 SPTBN2O15020 2390 aa19.42■□□□□ 0.7
CCDC78-204ENST00000439619 MYO18AQ92614 2054 aaKnown RBP19.42■□□□□ 0.7
CCDC78-204ENST00000439619 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.41■□□□□ 0.7
CCDC78-204ENST00000439619 M0QYT0 321 aa19.41■□□□□ 0.7
CCDC78-204ENST00000439619 CER1O95813 267 aa19.41■□□□□ 0.7
CCDC78-204ENST00000439619 ERBB2P04626 1255 aa19.41■□□□□ 0.7
CCDC78-204ENST00000439619 CYP11B1P15538 503 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms