RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 CDKL3Q8IVW4 592 aaPredicted RBP7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 GALNT11Q8NCW6 608 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 PJA1Q8NG27 643 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 LILRB4Q8NHJ6 448 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 LXNQ9BS40 222 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 GTPBP2Q9BX10 602 aaKnown RBP7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 PCDH9Q9HC56 1237 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 MKS1Q9NXB0 559 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 ABCC6O95255 1503 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 A0A1W2PQ72 361 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 CSF1RP07333 972 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 C15orf40Q8WUR7 153 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 GMIPQ9P107 970 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 SCN3AQ9NY46 2000 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 TCP10L2B9ZVM9 353 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 CLDN3O15551 220 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 ENTPD5O75356 428 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 CAPN15O75808 1086 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 LINGO3P0C6S8 592 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 CYP19A1P11511 503 aaPredicted RBP7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 ERVK-9P63128 1117 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 MAPK11Q15759 364 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 LACRTQ9GZZ8 138 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 NOL11Q9H8H0 719 aaKnown RBP7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 PRDM5Q9NQX1 630 aaPredicted RBP7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 NEU2Q9Y3R4 380 aa7.69□□□□□ -1.18
SYNPO2-202ENST00000429713 DNAJB1P25685 340 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 GABARAPL2P60520 117 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 SLFN12LQ6IEE8 588 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 RHPN2Q8IUC4 686 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 RP9Q8TA86 221 aaKnown RBP7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 PSMA8Q8TAA3 256 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 ACSL5Q9ULC5 683 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 AFG3L2Q9Y4W6 797 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 METTL21EPA6NDL7 271 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 MPP1Q00013 466 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 MED10Q9BTT4 135 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 COPZ2Q9P299 210 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 A0A087X0T9 212 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 PON1P27169 355 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 MAGEA10P43363 369 aaPredicted RBP7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 RPL10AP62906 217 aaKnown RBP7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 SLC12A1Q13621 1099 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 QPRTQ15274 297 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 RELL1Q8IUW5 271 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 RASGEF1CQ8N431 466 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 PIWIL2Q8TC59 973 aaKnown RBP7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 GLMNQ92990 594 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 ELMO2Q96JJ3 720 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 TMEM120AQ9BXJ8 343 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 LRRC37A3O60309 1634 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 LDLRP01130 860 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 PBX1P40424 430 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 GRIA2P42262 883 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 KLHDC7AQ5VTJ3 777 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 TMEM179Q6ZVK1 233 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 IFNL1Q8IU54 200 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 TBC1D21Q8IYX1 336 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 LRRC17Q8N6Y2 441 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 ACSS3Q9H6R3 686 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 HEY1Q9Y5J3 304 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 PXDNQ92626 1479 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 CFLARO15519 480 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 BBOX1O75936 387 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 CIITAP33076 1130 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 SLC26A3P40879 764 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 CHRNB3Q05901 458 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 CCNG2Q16589 344 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 MAGED2Q9UNF1 606 aaPredicted RBP7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 A3GALT2U3KPV4 340 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 A0A0J9YVX5 310 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 TMEM221A6NGB7 291 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 COILP38432 576 aaPredicted RBP7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 PSMC6P62333 389 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 TSNQ15631 228 aaKnown RBP7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 GALNTL6Q49A17 601 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 CCNJQ5T5M9 372 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 PLET1Q6UQ28 207 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 ADAMTS10Q9H324 1103 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 OR51B5Q9H339 312 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 PAK5Q9P286 719 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 MYL3P08590 195 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 PMS1P54277 932 aaKnown RBP7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 NFIL3Q16649 462 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 C12orf60Q5U649 245 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 OR52E8Q6IFG1 317 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 CNTD1Q8N815 330 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 ARL10Q8N8L6 244 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 CCNYQ8ND76 341 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 RNF25Q96BH1 459 aaPredicted RBP7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 KCTD15Q96SI1 283 aaPredicted RBP7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 MALT1Q9UDY8 824 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 SLC9A1P19634 815 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 PGDP52209 483 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 AP3S2P59780 193 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 PTK7Q13308 1070 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 LRRC38Q5VT99 294 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 FAM160B1Q5W0V3 765 aa7.68□□□□□ -1.18
SYNPO2-202ENST00000429713 PADI6Q6TGC4 694 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms