RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 CYFIP2Q96F07 1278 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 CLIC6Q96NY7 704 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 TWNKQ96RR1 684 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 PANK2Q9BZ23 570 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 VRTNQ9H8Y1 702 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 UCKL1Q9NWZ5 548 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 CLIC5Q9NZA1 410 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 CA5BQ9Y2D0 317 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 SSUH2Q9Y2M2 353 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 ZDHHC9Q9Y397 364 aa12.09□□□□□ -0.47
ALMS1P1-201ENST00000428767 NBASA2RRP1 2371 aa12.08□□□□□ -0.47
ALMS1P1-201ENST00000428767 NOTCH2Q04721 2471 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 A0A1W2PNU3 283 aaPredicted RBP12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 STX6O43752 255 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 VNN1O95497 513 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 BMP15O95972 392 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 GP1BBP13224 206 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 SLC8A1P32418 973 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 STAT6P42226 847 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 ST8SIA6P61647 398 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 NUCB2P80303 420 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 PDE4CQ08493 712 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 SFSWAPQ12872 951 aaKnown RBP12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 LINC00303Q3SY05 128 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 SPOPLQ6IQ16 392 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 SND1Q7KZF4 910 aaKnown RBP eCLIP12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 KIAA0907Q7Z7F0 614 aaPredicted RBP12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 ZNF276Q8N554 614 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 AADATQ8N5Z0 425 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 MFSD2AQ8NA29 543 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 XXYLT1Q8NBI6 393 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 OR4C6Q8NH72 309 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 EXTL1Q92935 676 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 TMA16Q96EY4 203 aaKnown RBP12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 ATXN7L3BQ96GX2 97 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 MYO19Q96H55 970 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 MYOCQ99972 504 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 ARHGAP9Q9BRR9 750 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 ABCG4Q9H172 646 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 FZD4Q9ULV1 537 aa12.08□□□□□ -0.48
ALMS1P1-201ENST00000428767 TBC1D3DA0A087WVF3 549 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 TBC1D3IA0A087WXS9 549 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 TBC1D3EA0A087X179 549 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 TBC1D3KA0A087X1G2 549 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 TBC1D3FA6NER0 549 aaPredicted RBP12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 LRRIQ3A6PVS8 624 aaPredicted RBP12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 TBC1D3LB9A6J9 549 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 TGFB1I1O43294 461 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 TBC1D3HP0C7X1 549 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 P4HA1P13674 534 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 DGKAP23743 735 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 TXLNAP40222 546 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 CLN3Q13286 438 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 ISXQ2M1V0 245 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 HNRNPA1L2Q32P51 320 aaKnown RBP12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 SGO2Q562F6 1265 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 TBC1D3GQ6DHY5 549 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 TBC1D3CQ6IPX1 549 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 PRPF39Q86UA1 669 aaKnown RBP12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 TBC1D3Q8IZP1 549 aaPredicted RBP12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 MAPK15Q8TD08 544 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 CCDC97Q96F63 343 aaPredicted RBP12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 PNPLA8Q9NP80 782 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 STARD5Q9NSY2 213 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 STIM2Q9P246 746 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 MTMR6Q9Y217 621 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 USP3Q9Y6I4 520 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 UBE4BO95155 1302 aa12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 USP9YO00507 2555 aaPredicted RBP12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 ZFC3H1O60293 1989 aaKnown RBP12.07□□□□□ -0.48
ALMS1P1-201ENST00000428767 A0A087X0B3 334 aa12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 VPS37CA5D8V6 355 aaPredicted RBP12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 TTC34A8MYJ7 566 aa12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 C10orf142B7Z368 130 aa12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 SUV39H1O43463 412 aa12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 MAGEC1O60732 1142 aa12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 TBL1XO60907 577 aa12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 FAM87AP0C7U9 286 aa12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 ZSCAN22P10073 491 aaPredicted RBP12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 CKMT1AP12532 417 aa12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 GOT1P17174 413 aa12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 TRIM21P19474 475 aaKnown RBP12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 CSKP41240 450 aa12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 ASPAP45381 313 aa12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 HARS2P49590 506 aaKnown RBP12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 METAP1P53582 386 aa12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 YWHAGP61981 247 aaKnown RBP eCLIP12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 SKOR1P84550 965 aa12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 TLE1Q04724 770 aa12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 UBAP2LQ14157 1087 aaKnown RBP12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 STAT4Q14765 748 aa12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 TRIP4Q15650 581 aaPredicted RBP12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 C9orf64Q5T6V5 341 aa12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 RFWD3Q6PCD5 774 aa12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 UNC93AQ86WB7 457 aa12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 STK40Q8N2I9 435 aa12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 NDRG1Q92597 394 aaKnown RBP12.06□□□□□ -0.48
ALMS1P1-201ENST00000428767 APOLD1Q96LR9 279 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms