RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 MAP3K6O95382 1288 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 CTSAP10619 480 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 HMGA1P17096 107 aaKnown RBP18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 ERCC2P18074 760 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 CREMQ03060 361 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 ARTNQ5T4W7 220 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 CFAP58Q5T655 872 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 SNX30Q5VWJ9 437 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 B4GALNT4Q76KP1 1039 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 FCRL2Q96LA5 508 aaPredicted RBP18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 QKIQ96PU8 341 aaKnown RBP eCLIP18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 TSPYL1Q9H0U9 437 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 ENTPD7Q9NQZ7 604 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 NEU3Q9UQ49 428 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 YIPF1Q9Y548 306 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 SNX10Q9Y5X0 201 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 SPDYE4A6NLX3 237 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 HACD1B0YJ81 288 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 PAGE1O75459 146 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 SLC2A3P11169 496 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 COL9A1P20849 921 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 RBL1P28749 1068 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 HTR7P34969 479 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 NRG1Q02297 640 aaPredicted RBP18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 SLMAPQ14BN4 828 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 MORF4L2Q15014 288 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 RNASEH2BQ5TBB1 312 aaKnown RBP18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 MANEALQ5VSG8 457 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 TCEAL8Q8IYN2 117 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 SMRP1Q8NCR6 262 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 VN1R2Q8NFZ6 395 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 MYRFLQ96LU7 910 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 ZIM3Q96PE6 472 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 FOXP3Q9BZS1 431 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 CYP4F11Q9HBI6 524 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 ATP8A1Q9Y2Q0 1164 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 RAD54BQ9Y620 910 aa18.5■□□□□ 0.55
AC055811.2-201ENST00000427497 C19orf67A6NJJ6 358 aa18.49■□□□□ 0.55
AC055811.2-201ENST00000427497 TEX28O15482 410 aa18.49■□□□□ 0.55
AC055811.2-201ENST00000427497 KCNN4O15554 427 aa18.49■□□□□ 0.55
AC055811.2-201ENST00000427497 CSH1P0DML2 217 aa18.49■□□□□ 0.55
AC055811.2-201ENST00000427497 CSH2P0DML3 217 aa18.49■□□□□ 0.55
AC055811.2-201ENST00000427497 HOXC13P31276 330 aa18.49■□□□□ 0.55
AC055811.2-201ENST00000427497 CHKAP35790 457 aa18.49■□□□□ 0.55
AC055811.2-201ENST00000427497 PMS2P54278 862 aa18.49■□□□□ 0.55
AC055811.2-201ENST00000427497 TBX4P57082 545 aa18.49■□□□□ 0.55
AC055811.2-201ENST00000427497 EFEMP1Q12805 493 aa18.49■□□□□ 0.55
AC055811.2-201ENST00000427497 GPS2Q13227 327 aa18.49■□□□□ 0.55
AC055811.2-201ENST00000427497 TRIP4Q15650 581 aaPredicted RBP18.49■□□□□ 0.55
AC055811.2-201ENST00000427497 TMC7Q7Z402 723 aa18.49■□□□□ 0.55
AC055811.2-201ENST00000427497 PDZD8Q8NEN9 1154 aa18.49■□□□□ 0.55
AC055811.2-201ENST00000427497 TRMT2BQ96GJ1 504 aaKnown RBP18.49■□□□□ 0.55
AC055811.2-201ENST00000427497 EPB41L4BQ9H329 900 aa18.49■□□□□ 0.55
AC055811.2-201ENST00000427497 MAGED2Q9UNF1 606 aaPredicted RBP18.49■□□□□ 0.55
AC055811.2-201ENST00000427497 SHOC2Q9UQ13 582 aa18.49■□□□□ 0.55
AC055811.2-201ENST00000427497 SSX2IPQ9Y2D8 614 aa18.49■□□□□ 0.55
AC055811.2-201ENST00000427497 FARP1Q9Y4F1 1045 aaPredicted RBP18.49■□□□□ 0.55
AC055811.2-201ENST00000427497 HIDE1A8MVS5 230 aa18.48■□□□□ 0.55
AC055811.2-201ENST00000427497 H3BQF6 201 aa18.48■□□□□ 0.55
AC055811.2-201ENST00000427497 TBX18O95935 607 aa18.48■□□□□ 0.55
AC055811.2-201ENST00000427497 IGLV3-27P01718 113 aa18.48■□□□□ 0.55
AC055811.2-201ENST00000427497 GGCXP38435 758 aa18.48■□□□□ 0.55
AC055811.2-201ENST00000427497 ALDH1A3P47895 512 aa18.48■□□□□ 0.55
AC055811.2-201ENST00000427497 NRLP54845 237 aa18.48■□□□□ 0.55
AC055811.2-201ENST00000427497 C10orf120Q5SQS8 335 aa18.48■□□□□ 0.55
AC055811.2-201ENST00000427497 PCGF5Q86SE9 256 aa18.48■□□□□ 0.55
AC055811.2-201ENST00000427497 ZCCHC9Q8N567 271 aaKnown RBP18.48■□□□□ 0.55
AC055811.2-201ENST00000427497 C1orf74Q96LT6 269 aa18.48■□□□□ 0.55
AC055811.2-201ENST00000427497 MARCH2Q9P0N8 246 aa18.48■□□□□ 0.55
AC055811.2-201ENST00000427497 TLR5O60602 858 aa18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 EPHB2P29323 1055 aa18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 KCNC3Q14003 757 aa18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 PDK1Q15118 436 aa18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 PRKD1Q15139 912 aaPredicted RBP18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 LRIG3Q6UXM1 1119 aa18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 PDZD4Q76G19 769 aaPredicted RBP18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 RELL1Q8IUW5 271 aa18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 TFB1MQ8WVM0 346 aaKnown RBP18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 UBLCP1Q8WVY7 318 aaPredicted RBP18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 CPT1BQ92523 772 aa18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 CDK5RAP1Q96SZ6 601 aaKnown RBP18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 SH3GL2Q99962 352 aa18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 SIK2Q9H0K1 926 aa18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 PABPC3Q9H361 631 aaKnown RBP18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 CCSER2Q9H7U1 834 aa18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 MED4Q9NPJ6 270 aa18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 PAK5Q9P286 719 aa18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 XPO7Q9UIA9 1087 aaKnown RBP18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 NFS1Q9Y697 457 aa18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 GCATO75600 419 aa18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 SYF2O95926 243 aaKnown RBP18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 CNPP09543 421 aaKnown RBP18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 MLLT6P55198 1093 aaPredicted RBP18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 RING1Q06587 406 aa18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 TMEM184AQ6ZMB5 413 aa18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 HOOK3Q86VS8 718 aa18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 PPIL6Q8IXY8 311 aa18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 NAT8LQ8N9F0 302 aa18.47■□□□□ 0.55
AC055811.2-201ENST00000427497 PRCCQ92733 491 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms