RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 PCDHB7Q9Y5E2 793 aa15.21■□□□□ 0.03
SEMA4D-204ENST00000420101 FRMPD3Q5JV73 1810 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 CAPN14A8MX76 684 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 B2RBV5 119 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 FCHO1O14526 889 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 BIRC5O15392 142 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 BUD23O43709 281 aaKnown RBP15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 OPHN1O60890 802 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 NBNO60934 754 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 PFKMP08237 780 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 PTPN1P18031 435 aaKnown RBP15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 RFC1P35251 1148 aaPredicted RBP15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 BRCC3P46736 316 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 CENPFP49454 3210 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 NEK3P51956 506 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 CCL23P55773 120 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 USP46P62068 366 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 LLGL1Q15334 1064 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 TIGD5Q53EQ6 642 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 MDH1BQ5I0G3 518 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 NOMO2Q5JPE7 1267 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 CFAP157Q5JU67 520 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 ARMC3Q5W041 872 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 PMF1Q6P1K2 205 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 SLC39A5Q6ZMH5 540 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 EMC1Q8N766 993 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 ANKRD52Q8NB46 1076 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 ATP11CQ8NB49 1132 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 JOSD2Q8TAC2 188 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 LINC01599Q8WXQ3 324 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 SCLYQ96I15 445 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 WWP1Q9H0M0 922 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 HIPK3Q9H422 1215 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 Q9H521 79 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 DCTN4Q9UJW0 460 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 PLA2G4CQ9UP65 541 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 WASF2Q9Y6W5 498 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 TCRBV5S1A1TA0A578 114 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 F8VP50 259 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 PITPNM1O00562 1244 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 FAM163BP0C2L3 166 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 GABRB2P47870 512 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 CHN2P52757 468 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 HPCAP84074 193 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 PLCB3Q01970 1234 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 USP4Q13107 963 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 RIPOR1Q6ZS17 1223 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 FAM183BPQ6ZVS7 135 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 GSTA5Q7RTV2 222 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 DHDDSQ86SQ9 333 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 CROCCP3Q8IVE0 287 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 ULK2Q8IYT8 1036 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 DDI1Q8WTU0 396 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 RSPH1Q8WYR4 309 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 MTBPQ96DY7 904 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 C7orf26Q96N11 449 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 MAK16Q9BXY0 300 aaKnown RBP15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 FRMD8P1Q9BZ68 369 aaPredicted RBP15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 VPS37BQ9H9H4 285 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 DNAJC17Q9NVM6 304 aaKnown RBP15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 WDR37Q9Y2I8 494 aa15.2■□□□□ 0.02
SEMA4D-204ENST00000420101 PDCD11Q14690 1871 aaKnown RBP15.19■□□□□ 0.02
SEMA4D-204ENST00000420101 IQANK1A0A1B0GTG1 560 aa15.19■□□□□ 0.02
SEMA4D-204ENST00000420101 RNASEH1O60930 286 aaKnown RBP15.19■□□□□ 0.02
SEMA4D-204ENST00000420101 GRAP2O75791 330 aa15.19■□□□□ 0.02
SEMA4D-204ENST00000420101 LCP1P13796 627 aa15.19■□□□□ 0.02
SEMA4D-204ENST00000420101 ADRA1DP25100 572 aa15.19■□□□□ 0.02
SEMA4D-204ENST00000420101 OR1G1P47890 313 aa15.19■□□□□ 0.02
SEMA4D-204ENST00000420101 TAS2R40P59535 323 aa15.19■□□□□ 0.02
SEMA4D-204ENST00000420101 OGDHQ02218 1023 aa15.19■□□□□ 0.02
SEMA4D-204ENST00000420101 TRIP13Q15645 432 aaPredicted RBP15.19■□□□□ 0.02
SEMA4D-204ENST00000420101 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.19■□□□□ 0.02
SEMA4D-204ENST00000420101 ANKRD20A4Q4UJ75 823 aa15.19■□□□□ 0.02
SEMA4D-204ENST00000420101 LIMS2Q7Z4I7 341 aa15.19■□□□□ 0.02
SEMA4D-204ENST00000420101 CTU1Q7Z7A3 348 aaKnown RBP15.19■□□□□ 0.02
SEMA4D-204ENST00000420101 TMEM126BQ8IUX1 230 aa15.19■□□□□ 0.02
SEMA4D-204ENST00000420101 DIS3LQ8TF46 1054 aaKnown RBP15.19■□□□□ 0.02
SEMA4D-204ENST00000420101 ACSS3Q9H6R3 686 aa15.19■□□□□ 0.02
SEMA4D-204ENST00000420101 S100A14Q9HCY8 104 aa15.19■□□□□ 0.02
SEMA4D-204ENST00000420101 ATP11BQ9Y2G3 1177 aa15.19■□□□□ 0.02
SEMA4D-204ENST00000420101 ARHGEF37A1IGU5 675 aa15.18■□□□□ 0.02
SEMA4D-204ENST00000420101 CLDN5O00501 218 aa15.18■□□□□ 0.02
SEMA4D-204ENST00000420101 ENPP3O14638 875 aa15.18■□□□□ 0.02
SEMA4D-204ENST00000420101 GABRDO14764 452 aa15.18■□□□□ 0.02
SEMA4D-204ENST00000420101 CASQ2O14958 399 aaPredicted RBP15.18■□□□□ 0.02
SEMA4D-204ENST00000420101 AMPD1P23109 780 aa15.18■□□□□ 0.02
SEMA4D-204ENST00000420101 HADHQ16836 314 aaKnown RBP15.18■□□□□ 0.02
SEMA4D-204ENST00000420101 TRIM60Q495X7 471 aa15.18■□□□□ 0.02
SEMA4D-204ENST00000420101 PKDCCQ504Y2 493 aa15.18■□□□□ 0.02
SEMA4D-204ENST00000420101 CLLU1OSQ5K130 101 aa15.18■□□□□ 0.02
SEMA4D-204ENST00000420101 C1orf146Q5VVC0 180 aa15.18■□□□□ 0.02
SEMA4D-204ENST00000420101 ATG16L1Q676U5 607 aa15.18■□□□□ 0.02
SEMA4D-204ENST00000420101 DCLRE1AQ6PJP8 1040 aa15.18■□□□□ 0.02
SEMA4D-204ENST00000420101 DEFB128Q7Z7B8 93 aa15.18■□□□□ 0.02
SEMA4D-204ENST00000420101 SCUBE3Q8IX30 993 aa15.18■□□□□ 0.02
SEMA4D-204ENST00000420101 TCP10LQ8TDR4 215 aa15.18■□□□□ 0.02
SEMA4D-204ENST00000420101 SLC35F5Q8WV83 523 aa15.18■□□□□ 0.02
SEMA4D-204ENST00000420101 ATG4AQ8WYN0 398 aa15.18■□□□□ 0.02
SEMA4D-204ENST00000420101 MCRS1Q96EZ8 462 aa15.18■□□□□ 0.02
SEMA4D-204ENST00000420101 MPP4Q96JB8 637 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms