RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 ZDHHC11BP0C7U3 371 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 TBX4P57082 545 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 WASHC5Q12768 1159 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 TAF10Q12962 218 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 TRIP4Q15650 581 aaPredicted RBP17.26■□□□□ 0.35
SSBP3-205ENST00000417664 SPOUT1Q5T280 376 aaKnown RBP17.26■□□□□ 0.35
SSBP3-205ENST00000417664 ANKMY2Q8IV38 441 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 GPR65Q8IYL9 337 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 PDZD8Q8NEN9 1154 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 TMEM169Q96HH4 297 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 TSGA13Q96PP4 275 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 UBE2OQ9C0C9 1292 aaKnown RBP17.26■□□□□ 0.35
SSBP3-205ENST00000417664 SIK2Q9H0K1 926 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 CRISPLD1Q9H336 500 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 ACSS3Q9H6R3 686 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 SENP1Q9P0U3 644 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 NEU3Q9UQ49 428 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 MSI1O43347 362 aaKnown RBP17.26■□□□□ 0.35
SSBP3-205ENST00000417664 ELK3P41970 407 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 GEMIN4P57678 1058 aaKnown RBP17.26■□□□□ 0.35
SSBP3-205ENST00000417664 DSG1Q02413 1049 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 RING1Q06587 406 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 RWDD4Q6NW29 188 aaKnown RBP17.26■□□□□ 0.35
SSBP3-205ENST00000417664 EXOC3L1Q86VI1 746 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 CAND1Q86VP6 1230 aaKnown RBP17.26■□□□□ 0.35
SSBP3-205ENST00000417664 SLC39A11Q8N1S5 342 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 NPWQ8N729 165 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 ATP6V0D2Q8N8Y2 350 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 HERC2P3Q9BVR0 1158 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 RABGEF1Q9UJ41 708 aa17.26■□□□□ 0.35
SSBP3-205ENST00000417664 COL4A6Q14031 1691 aa17.25■□□□□ 0.35
SSBP3-205ENST00000417664 SLC38A8A6NNN8 435 aa17.25■□□□□ 0.35
SSBP3-205ENST00000417664 ERI2A8K979 691 aaKnown RBP17.25■□□□□ 0.35
SSBP3-205ENST00000417664 TRDMT1O14717 391 aaKnown RBP17.25■□□□□ 0.35
SSBP3-205ENST00000417664 SRGAP2BP0DMP2 458 aa17.25■□□□□ 0.35
SSBP3-205ENST00000417664 RAG1P15918 1043 aa17.25■□□□□ 0.35
SSBP3-205ENST00000417664 LSP1P33241 339 aa17.25■□□□□ 0.35
SSBP3-205ENST00000417664 OR1D2P34982 312 aa17.25■□□□□ 0.35
SSBP3-205ENST00000417664 GUCY1A3Q02108 690 aa17.25■□□□□ 0.35
SSBP3-205ENST00000417664 HP1BP3Q5SSJ5 553 aaPredicted RBP17.25■□□□□ 0.35
SSBP3-205ENST00000417664 FAXCQ5TGI0 409 aa17.25■□□□□ 0.35
SSBP3-205ENST00000417664 SNX30Q5VWJ9 437 aa17.25■□□□□ 0.35
SSBP3-205ENST00000417664 ITPRIPL1Q6GPH6 555 aa17.25■□□□□ 0.35
SSBP3-205ENST00000417664 CNPY4Q8N129 248 aa17.25■□□□□ 0.35
SSBP3-205ENST00000417664 ZNF567Q8N184 647 aa17.25■□□□□ 0.35
SSBP3-205ENST00000417664 ZNF461Q8TAF7 563 aa17.25■□□□□ 0.35
SSBP3-205ENST00000417664 BTN2A3PQ96KV6 586 aa17.25■□□□□ 0.35
SSBP3-205ENST00000417664 CYTH2Q99418 400 aa17.25■□□□□ 0.35
SSBP3-205ENST00000417664 WDR83Q9BRX9 315 aaKnown RBP17.25■□□□□ 0.35
SSBP3-205ENST00000417664 VN1R3Q9BXE9 311 aa17.25■□□□□ 0.35
SSBP3-205ENST00000417664 MARCH2Q9P0N8 246 aa17.25■□□□□ 0.35
SSBP3-205ENST00000417664 PSMC3IPQ9P2W1 217 aaPredicted RBP17.25■□□□□ 0.35
SSBP3-205ENST00000417664 PPARGC1AQ9UBK2 798 aaKnown RBP17.25■□□□□ 0.35
SSBP3-205ENST00000417664 MAFFQ9ULX9 164 aa17.25■□□□□ 0.35
SSBP3-205ENST00000417664 ZNF638Q14966 1978 aaKnown RBP17.24■□□□□ 0.35
SSBP3-205ENST00000417664 GREB1Q4ZG55 1949 aa17.24■□□□□ 0.35
SSBP3-205ENST00000417664 BANF1O75531 89 aa17.24■□□□□ 0.35
SSBP3-205ENST00000417664 ABLIM3O94929 683 aa17.24■□□□□ 0.35
SSBP3-205ENST00000417664 CCNCP24863 283 aa17.24■□□□□ 0.35
SSBP3-205ENST00000417664 PTPN3P26045 913 aa17.24■□□□□ 0.35
SSBP3-205ENST00000417664 SSTR1P30872 391 aa17.24■□□□□ 0.35
SSBP3-205ENST00000417664 STX2P32856 288 aa17.24■□□□□ 0.35
SSBP3-205ENST00000417664 WDR5P61964 334 aaKnown RBP17.24■□□□□ 0.35
SSBP3-205ENST00000417664 BTG3Q14201 252 aaPredicted RBP17.24■□□□□ 0.35
SSBP3-205ENST00000417664 LRRC31Q6UY01 552 aa17.24■□□□□ 0.35
SSBP3-205ENST00000417664 PID1Q7Z2X4 250 aa17.24■□□□□ 0.35
SSBP3-205ENST00000417664 CCNJLQ8IV13 435 aa17.24■□□□□ 0.35
SSBP3-205ENST00000417664 CCDC33Q8N5R6 958 aa17.24■□□□□ 0.35
SSBP3-205ENST00000417664 LRRN4Q8WUT4 740 aa17.24■□□□□ 0.35
SSBP3-205ENST00000417664 MAML1Q92585 1016 aa17.24■□□□□ 0.35
SSBP3-205ENST00000417664 SPG21Q9NZD8 308 aa17.24■□□□□ 0.35
SSBP3-205ENST00000417664 KLHL8Q9P2G9 620 aaPredicted RBP17.24■□□□□ 0.35
SSBP3-205ENST00000417664 CHMP2BQ9UQN3 213 aa17.24■□□□□ 0.35
SSBP3-205ENST00000417664 SNX10Q9Y5X0 201 aa17.24■□□□□ 0.35
SSBP3-205ENST00000417664 HS3ST4Q9Y661 456 aa17.24■□□□□ 0.35
SSBP3-205ENST00000417664 TRIM43BA6NCK2 446 aa17.23■□□□□ 0.35
SSBP3-205ENST00000417664 E9PAM4 449 aa17.23■□□□□ 0.35
SSBP3-205ENST00000417664 SOAT2O75908 522 aa17.23■□□□□ 0.35
SSBP3-205ENST00000417664 IGLV3-27P01718 113 aa17.23■□□□□ 0.35
SSBP3-205ENST00000417664 CSH1P0DML2 217 aa17.23■□□□□ 0.35
SSBP3-205ENST00000417664 CSH2P0DML3 217 aa17.23■□□□□ 0.35
SSBP3-205ENST00000417664 HSPA8P11142 646 aaKnown RBP17.23■□□□□ 0.35
SSBP3-205ENST00000417664 CSF2RAP15509 400 aa17.23■□□□□ 0.35
SSBP3-205ENST00000417664 ATF6P18850 670 aa17.23■□□□□ 0.35
SSBP3-205ENST00000417664 GCAP28676 217 aa17.23■□□□□ 0.35
SSBP3-205ENST00000417664 PPM1AP35813 382 aa17.23■□□□□ 0.35
SSBP3-205ENST00000417664 TUBP50607 506 aa17.23■□□□□ 0.35
SSBP3-205ENST00000417664 EFEMP1Q12805 493 aa17.23■□□□□ 0.35
SSBP3-205ENST00000417664 TEX44Q53QW1 395 aa17.23■□□□□ 0.35
SSBP3-205ENST00000417664 C10orf120Q5SQS8 335 aa17.23■□□□□ 0.35
SSBP3-205ENST00000417664 RASIP1Q5U651 963 aa17.23■□□□□ 0.35
SSBP3-205ENST00000417664 LRRC8BQ6P9F7 803 aa17.23■□□□□ 0.35
SSBP3-205ENST00000417664 CYS1Q717R9 158 aa17.23■□□□□ 0.35
SSBP3-205ENST00000417664 DDX53Q86TM3 631 aaKnown RBP17.23■□□□□ 0.35
SSBP3-205ENST00000417664 RTL3Q8N8U3 475 aaKnown RBP17.23■□□□□ 0.35
SSBP3-205ENST00000417664 GPR152Q8TDT2 470 aa17.23■□□□□ 0.35
SSBP3-205ENST00000417664 FBF1Q8TES7 1133 aa17.23■□□□□ 0.35
SSBP3-205ENST00000417664 TRIM43Q96BQ3 446 aaPredicted RBP17.23■□□□□ 0.35
SSBP3-205ENST00000417664 CLSTN3Q9BQT9 956 aa17.23■□□□□ 0.35
SSBP3-205ENST00000417664 NAT9Q9BTE0 207 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms