RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 CETN1Q12798 172 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 TEAD4Q15561 434 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 LRSAM1Q6UWE0 723 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 LAYNQ6UX15 382 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 SCUBE3Q8IX30 993 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 EHBP1Q8NDI1 1231 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 SLC39A13Q96H72 371 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 KREMEN1Q96MU8 473 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 SERPINB11Q96P15 392 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 CDC6Q99741 560 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 DDX50Q9BQ39 737 aaKnown RBP15.37■□□□□ 0.05
RPS28-201ENST00000417088 NUCKS1Q9H1E3 243 aaKnown RBP15.37■□□□□ 0.05
RPS28-201ENST00000417088 PABPC3Q9H361 631 aaKnown RBP15.37■□□□□ 0.05
RPS28-201ENST00000417088 LHX6Q9UPM6 363 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 NAALADL1Q9UQQ1 740 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 TLR6Q9Y2C9 796 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 PLXNB3Q9ULL4 1909 aa15.37■□□□□ 0.05
RPS28-201ENST00000417088 APC2O95996 2303 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 ACACAQ13085 2346 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 PPP1R3GB7ZBB8 358 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 SIN3BO75182 1162 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 DKK1O94907 266 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 ASLP04424 464 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 IGHV4-34P06331 123 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 HOXB3P14651 431 aaPredicted RBP15.36■□□□□ 0.05
RPS28-201ENST00000417088 PPP1R2P41236 205 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 NNTQ13423 1086 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 SUZ12Q15022 739 aaKnown RBP15.36■□□□□ 0.05
RPS28-201ENST00000417088 HNRNPA1L2Q32P51 320 aaKnown RBP15.36■□□□□ 0.05
RPS28-201ENST00000417088 DCAF6Q58WW2 860 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 FSCBQ5H9T9 825 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 MS4A13Q5J8X5 152 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 KCNT1Q5JUK3 1230 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 KIAA0895LQ68EN5 471 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 KLHL10Q6JEL2 608 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 MMS22LQ6ZRQ5 1243 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 USP30Q70CQ3 517 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 TAC4Q86UU9 113 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 ELOA2Q8IYF1 753 aaPredicted RBP15.36■□□□□ 0.05
RPS28-201ENST00000417088 CFAP52Q8N1V2 620 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 CARNMT1Q8N4J0 409 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 ADAM32Q8TC27 787 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 IGSF8Q969P0 613 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 FBXL12Q9NXK8 326 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 SERGEFQ9UGK8 458 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 CNTN6Q9UQ52 1028 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 NCKAP1Q9Y2A7 1128 aa15.36■□□□□ 0.05
RPS28-201ENST00000417088 TYW5A2RUC4 315 aaKnown RBP15.35■□□□□ 0.05
RPS28-201ENST00000417088 H0Y8X5 98 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 SART1O43290 800 aaKnown RBP15.35■□□□□ 0.05
RPS28-201ENST00000417088 MOCS2O96007 188 aaPredicted RBP15.35■□□□□ 0.05
RPS28-201ENST00000417088 CTSOP43234 321 aaPredicted RBP15.35■□□□□ 0.05
RPS28-201ENST00000417088 GALCP54803 685 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 KCNH2Q12809 1159 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 CDH18Q13634 790 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 ARID5BQ14865 1188 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 PITRM1Q5JRX3 1037 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 C9orf64Q5T6V5 341 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 SYPL2Q5VXT5 272 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 DENND1BQ6P3S1 775 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 FOXR2Q6PJQ5 311 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 BEND5Q7L4P6 421 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 TMPRSS7Q7RTY8 843 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 TRIM59Q8IWR1 403 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 DHX40Q8IX18 779 aaKnown RBP15.35■□□□□ 0.05
RPS28-201ENST00000417088 KDM1BQ8NB78 822 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 GANCQ8TET4 914 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 NELFBQ8WX92 580 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 FAM149B1Q96BN6 582 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 CCDC86Q9H6F5 360 aaKnown RBP15.35■□□□□ 0.05
RPS28-201ENST00000417088 ST7Q9NRC1 585 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 XPO7Q9UIA9 1087 aaKnown RBP15.35■□□□□ 0.05
RPS28-201ENST00000417088 SCML1Q9UN30 329 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 ERVW-1Q9UQF0 538 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 LAMA5O15230 3695 aa15.35■□□□□ 0.05
RPS28-201ENST00000417088 GOLGA4Q13439 2230 aaKnown RBP15.34■□□□□ 0.05
RPS28-201ENST00000417088 FAM47DPA6NHR8 397 aa15.34■□□□□ 0.05
RPS28-201ENST00000417088 TTC34A8MYJ7 566 aa15.34■□□□□ 0.05
RPS28-201ENST00000417088 MID1O15344 667 aa15.34■□□□□ 0.05
RPS28-201ENST00000417088 PCDHGA12O60330 932 aa15.34■□□□□ 0.05
RPS28-201ENST00000417088 RNASEH1O60930 286 aaKnown RBP15.34■□□□□ 0.05
RPS28-201ENST00000417088 LUC7L3O95232 432 aaKnown RBP15.34■□□□□ 0.05
RPS28-201ENST00000417088 CTSKP43235 329 aa15.34■□□□□ 0.05
RPS28-201ENST00000417088 ACADSBP45954 432 aa15.34■□□□□ 0.05
RPS28-201ENST00000417088 CST6Q15828 149 aa15.34■□□□□ 0.05
RPS28-201ENST00000417088 CCDC117Q8IWD4 279 aaPredicted RBP15.34■□□□□ 0.05
RPS28-201ENST00000417088 STK32AQ8WU08 396 aa15.34■□□□□ 0.05
RPS28-201ENST00000417088 SLC4A5Q9BY07 1137 aa15.34■□□□□ 0.05
RPS28-201ENST00000417088 INTS2Q9H0H0 1204 aaKnown RBP15.34■□□□□ 0.05
RPS28-201ENST00000417088 NEUROG2Q9H2A3 272 aa15.34■□□□□ 0.05
RPS28-201ENST00000417088 EBF2Q9HAK2 575 aa15.34■□□□□ 0.05
RPS28-201ENST00000417088 CYTH4Q9UIA0 394 aa15.34■□□□□ 0.05
RPS28-201ENST00000417088 SLCO3A1Q9UIG8 710 aa15.34■□□□□ 0.05
RPS28-201ENST00000417088 PTPRBP23467 1997 aa15.33■□□□□ 0.05
RPS28-201ENST00000417088 A0A1W2PP55 124 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 A0A1W2PPC4 97 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 BICDL2A1A5D9 508 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 TARSL2A2RTX5 802 aaKnown RBP15.33■□□□□ 0.04
RPS28-201ENST00000417088 GOLGA8CPA6NN73 597 aa15.33■□□□□ 0.04
RPS28-201ENST00000417088 C10orf142B7Z368 130 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms