RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 SPATA31D4Q6ZUB0 917 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 C3orf62Q6ZUJ4 267 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 RNF168Q8IYW5 571 aaPredicted RBP10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 PLCD3Q8N3E9 789 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 USP33Q8TEY7 942 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 PGM2Q96G03 612 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 CFAP36Q96G28 342 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 SPATA17Q96L03 361 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 ZNF512Q96ME7 567 aaPredicted RBP10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 AGAP3Q96P47 875 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 HAPLN3Q96S86 360 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 CCDC77Q9BR77 488 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 TRIM56Q9BRZ2 755 aaKnown RBP10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 TMEM109Q9BVC6 243 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 ROPN1BQ9BZX4 212 aaPredicted RBP10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 ROPN1Q9HAT0 212 aaPredicted RBP10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 IL37Q9NZH6 218 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 NEU3Q9UQ49 428 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 TLR5O60602 858 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 CREB1P16220 341 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 EN2P19622 333 aaPredicted RBP10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 SERPINB6P35237 376 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 IRAK1P51617 712 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 SMARCB1Q12824 385 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 OLIG2Q13516 323 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 SPARCL1Q14515 664 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 TMED2Q15363 201 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 PKN2Q16513 984 aaKnown RBP10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 MSANTD2Q6P1R3 559 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 FAM43BQ6ZT52 329 aaPredicted RBP10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 TFAP2DQ7Z6R9 452 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 CAND1Q86VP6 1230 aaKnown RBP10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 PDCD7Q8N8D1 485 aaKnown RBP10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 TBC1D31Q96DN5 1066 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 PRDM16Q9HAZ2 1276 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 RC3H2Q9HBD1 1191 aaKnown RBP10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 SPG21Q9NZD8 308 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 ALPK3Q96L96 1907 aa10.97□□□□□ -0.65
SMPD4P1-201ENST00000416717 FAM92AA1XBS5 289 aa10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 E7ESA3 106 aa10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 APOEP02649 317 aa10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 HSPA1AP0DMV8 641 aaKnown RBP10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 HSPA1BP0DMV9 641 aaKnown RBP10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 PTPN3P26045 913 aa10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 GARSP41250 739 aaKnown RBP10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 SKOR1P84550 965 aa10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 ZBTB17Q13105 803 aa10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 STAT4Q14765 748 aa10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 C16orf59Q7L2K0 433 aa10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 MPP5Q8N3R9 675 aa10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 ATP11CQ8NB49 1132 aa10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 ZNF461Q8TAF7 563 aa10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 FBF1Q8TES7 1133 aa10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 C2orf15Q8WU43 125 aaKnown RBP10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 SLC39A13Q96H72 371 aa10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 FERMT1Q9BQL6 677 aa10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 NACA2Q9H009 215 aa10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 ZMYND8Q9ULU4 1186 aaPredicted RBP10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 TTLL3Q9Y4R7 772 aa10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 BACE2Q9Y5Z0 518 aa10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 ANAPC1Q9H1A4 1944 aa10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 DOCK6Q96HP0 2047 aa10.96□□□□□ -0.65
SMPD4P1-201ENST00000416717 SMAPO00193 183 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 PRRG1O14668 218 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 AGTP01019 485 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 URODP06132 367 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 IVLP07476 585 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 ABHD2P08910 425 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 LAG3P18627 525 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 GCAP28676 217 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 TUFMP49411 452 aaKnown RBP10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 CRADDP78560 199 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 DSG1Q02413 1049 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 PPIDQ08752 370 aaKnown RBP10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 GALNT2Q10471 571 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 TAF12Q16514 161 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 RAP1GAP2Q684P5 730 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 PPP1R21Q6ZMI0 780 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 ZNF534Q76KX8 674 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 EXOC3L1Q86VI1 746 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 CIR1Q86X95 450 aaPredicted RBP10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 ARHGEF2Q92974 986 aaKnown RBP10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 ZBED2Q9BTP6 218 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 OXCT2Q9BYC2 517 aaPredicted RBP10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 PSD3Q9NYI0 1048 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 CLIC5Q9NZA1 410 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 AFF4Q9UHB7 1163 aaKnown RBP10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 MAD1L1Q9Y6D9 718 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 TEX264Q9Y6I9 313 aa10.96□□□□□ -0.66
SMPD4P1-201ENST00000416717 PLXNA4Q9HCM2 1894 aa10.95□□□□□ -0.66
SMPD4P1-201ENST00000416717 GOLGA6L7A0A1B0GV03 622 aa10.95□□□□□ -0.66
SMPD4P1-201ENST00000416717 EIF3HO15372 352 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMPD4P1-201ENST00000416717 ZBTB24O43167 697 aaPredicted RBP10.95□□□□□ -0.66
SMPD4P1-201ENST00000416717 OPHN1O60890 802 aa10.95□□□□□ -0.66
SMPD4P1-201ENST00000416717 USP12O75317 370 aa10.95□□□□□ -0.66
SMPD4P1-201ENST00000416717 CNTN5O94779 1100 aa10.95□□□□□ -0.66
SMPD4P1-201ENST00000416717 GJB5O95377 273 aa10.95□□□□□ -0.66
SMPD4P1-201ENST00000416717 JCHAINP01591 159 aa10.95□□□□□ -0.66
SMPD4P1-201ENST00000416717 MX2P20592 715 aa10.95□□□□□ -0.66
SMPD4P1-201ENST00000416717 PSEN1P49768 467 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms