RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 ITPKBP27987 946 aa10.42□□□□□ -0.74
MDC1-202ENST00000416571 EIF2S3P41091 472 aaKnown RBP10.42□□□□□ -0.74
MDC1-202ENST00000416571 SGSHP51688 502 aa10.42□□□□□ -0.74
MDC1-202ENST00000416571 GALCP54803 685 aa10.42□□□□□ -0.74
MDC1-202ENST00000416571 YWHAEP62258 255 aaKnown RBP10.42□□□□□ -0.74
MDC1-202ENST00000416571 CST6Q15828 149 aa10.42□□□□□ -0.74
MDC1-202ENST00000416571 NFIL3Q16649 462 aa10.42□□□□□ -0.74
MDC1-202ENST00000416571 HNRNPA1L2Q32P51 320 aaKnown RBP10.42□□□□□ -0.74
MDC1-202ENST00000416571 MPP7Q5T2T1 576 aa10.42□□□□□ -0.74
MDC1-202ENST00000416571 HES3Q5TGS1 186 aa10.42□□□□□ -0.74
MDC1-202ENST00000416571 TCERG1LQ5VWI1 586 aa10.42□□□□□ -0.74
MDC1-202ENST00000416571 NUGGCQ68CJ6 796 aa10.42□□□□□ -0.74
MDC1-202ENST00000416571 RFWD3Q6PCD5 774 aa10.42□□□□□ -0.74
MDC1-202ENST00000416571 NCEH1Q6PIU2 408 aa10.42□□□□□ -0.74
MDC1-202ENST00000416571 DHX40Q8IX18 779 aaKnown RBP10.42□□□□□ -0.74
MDC1-202ENST00000416571 ZC3H3Q8IXZ2 948 aaKnown RBP10.42□□□□□ -0.74
MDC1-202ENST00000416571 EID2Q8N6I1 236 aa10.42□□□□□ -0.74
MDC1-202ENST00000416571 HJURPQ8NCD3 748 aaPredicted RBP10.42□□□□□ -0.74
MDC1-202ENST00000416571 OR2T34Q8NGX1 318 aa10.42□□□□□ -0.74
MDC1-202ENST00000416571 WFDC5Q8TCV5 224 aa10.42□□□□□ -0.74
MDC1-202ENST00000416571 FCRL3Q96P31 734 aaPredicted RBP10.42□□□□□ -0.74
MDC1-202ENST00000416571 DDX50Q9BQ39 737 aaKnown RBP10.42□□□□□ -0.74
MDC1-202ENST00000416571 ORAI3Q9BRQ5 295 aa10.42□□□□□ -0.74
MDC1-202ENST00000416571 IRX2Q9BZI1 471 aaPredicted RBP10.42□□□□□ -0.74
MDC1-202ENST00000416571 MTG2Q9H4K7 406 aa10.42□□□□□ -0.74
MDC1-202ENST00000416571 CNGB3Q9NQW8 809 aa10.42□□□□□ -0.74
MDC1-202ENST00000416571 RAB20Q9NX57 234 aa10.42□□□□□ -0.74
MDC1-202ENST00000416571 FZD4Q9ULV1 537 aa10.42□□□□□ -0.74
MDC1-202ENST00000416571 NYNRINQ9P2P1 1898 aaKnown RBP10.41□□□□□ -0.74
MDC1-202ENST00000416571 A0A1B0GVL5 298 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 CBX4O00257 560 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 TULP2O00295 520 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 CAPN9O14815 690 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 ATXN7O15265 892 aaPredicted RBP10.41□□□□□ -0.74
MDC1-202ENST00000416571 MID1O15344 667 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 ACSL4O60488 711 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 RHOBTB3O94955 611 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 MOCS3O95396 460 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 SETSIPP0DME0 302 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 EPB41P11171 864 aaKnown RBP10.41□□□□□ -0.74
MDC1-202ENST00000416571 PFKFB1P16118 471 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 EPHA8P29322 1005 aaPredicted RBP10.41□□□□□ -0.74
MDC1-202ENST00000416571 CLDN6P56747 220 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 TBX4P57082 545 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 TARDBPQ13148 414 aaKnown RBP eCLIP10.41□□□□□ -0.74
MDC1-202ENST00000416571 CDH18Q13634 790 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 PIK3R6Q5UE93 754 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 RNF219Q5W0B1 726 aaPredicted RBP10.41□□□□□ -0.74
MDC1-202ENST00000416571 SND1Q7KZF4 910 aaKnown RBP eCLIP10.41□□□□□ -0.74
MDC1-202ENST00000416571 BHLHA9Q7RTU4 235 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 MMAAQ8IVH4 418 aaKnown RBP10.41□□□□□ -0.74
MDC1-202ENST00000416571 GUF1Q8N442 669 aaKnown RBP10.41□□□□□ -0.74
MDC1-202ENST00000416571 CARNMT1Q8N4J0 409 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 OXR1Q8N573 874 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 UBA3Q8TBC4 463 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 SAP25Q8TEE9 199 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 SEMA4DQ92854 862 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 SERAC1Q96JX3 654 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 NRSN2Q9GZP1 204 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 NEUROG2Q9H2A3 272 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 SERGEFQ9UGK8 458 aa10.41□□□□□ -0.74
MDC1-202ENST00000416571 TPX2Q9ULW0 747 aaKnown RBP10.41□□□□□ -0.74
MDC1-202ENST00000416571 EDDM13A0A1B0GTR0 161 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 GOLGA6L7A0A1B0GV03 622 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 TARSL2A2RTX5 802 aaKnown RBP10.4□□□□□ -0.74
MDC1-202ENST00000416571 TLX3O43711 291 aaPredicted RBP10.4□□□□□ -0.74
MDC1-202ENST00000416571 WNT1P04628 370 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 VDRP11473 427 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 SLC6A4P31645 630 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 SLC8A1P32418 973 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 CSKP41240 450 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 PSMD8P48556 350 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 ACADVLP49748 655 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 CCR5P51681 352 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 DAOAP59103 153 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 DNM1Q05193 864 aaKnown RBP10.4□□□□□ -0.74
MDC1-202ENST00000416571 CUL2Q13617 745 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 DCAF17Q5H9S7 520 aaPredicted RBP10.4□□□□□ -0.74
MDC1-202ENST00000416571 ZNF605Q86T29 641 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 KDM1BQ8NB78 822 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 LSM14AQ8ND56 463 aaKnown RBP10.4□□□□□ -0.74
MDC1-202ENST00000416571 OR14C36Q8NHC7 312 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 FIBINQ8TAL6 211 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 KCTD13Q8WZ19 329 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 TTC17Q96AE7 1141 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 PRORYQ9H606 182 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 ADAMTS1Q9UHI8 967 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 RCOR1Q9UKL0 485 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 MYLKQ15746 1914 aa10.4□□□□□ -0.74
MDC1-202ENST00000416571 ASXL3Q9C0F0 2248 aa10.39□□□□□ -0.75
MDC1-202ENST00000416571 TBC1D3DA0A087WVF3 549 aa10.39□□□□□ -0.75
MDC1-202ENST00000416571 TBC1D3IA0A087WXS9 549 aa10.39□□□□□ -0.75
MDC1-202ENST00000416571 TBC1D3EA0A087X179 549 aa10.39□□□□□ -0.75
MDC1-202ENST00000416571 TBC1D3KA0A087X1G2 549 aa10.39□□□□□ -0.75
MDC1-202ENST00000416571 TEX51A0A1B0GUA7 166 aa10.39□□□□□ -0.75
MDC1-202ENST00000416571 TBC1D3FA6NER0 549 aaPredicted RBP10.39□□□□□ -0.75
MDC1-202ENST00000416571 TTC34A8MYJ7 566 aa10.39□□□□□ -0.75
MDC1-202ENST00000416571 TBC1D3LB9A6J9 549 aa10.39□□□□□ -0.75
MDC1-202ENST00000416571 TLR4O00206 839 aa10.39□□□□□ -0.75
MDC1-202ENST00000416571 CETN3O15182 167 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms