RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 I6L893 689 aaPredicted RBP8.65□□□□□ -1.02
RBM39-208ENST00000416108 PDE2AO00408 941 aaPredicted RBP8.65□□□□□ -1.02
RBM39-208ENST00000416108 NRG2O14511 850 aaPredicted RBP8.65□□□□□ -1.02
RBM39-208ENST00000416108 SCAMP3O14828 347 aaKnown RBP8.65□□□□□ -1.02
RBM39-208ENST00000416108 TSPAN3O60637 253 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 PHF2O75151 1096 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 PRAMEF12O95522 483 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 KLKB1P03952 638 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 MX2P20592 715 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 IL4RP24394 825 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 SLC6A4P31645 630 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 CHRNA3P32297 505 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 LTBRP36941 435 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 ATP5OP48047 213 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 NR2C2P49116 596 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 MAPKAPK2P49137 400 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 CDH4P55283 916 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 EIF3EP60228 445 aaKnown RBP8.65□□□□□ -1.02
RBM39-208ENST00000416108 OTUD4Q01804 1114 aaKnown RBP8.65□□□□□ -1.02
RBM39-208ENST00000416108 LMNB2Q03252 620 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 KLF1Q13351 362 aaPredicted RBP8.65□□□□□ -1.02
RBM39-208ENST00000416108 ZNF177Q13360 481 aaPredicted RBP8.65□□□□□ -1.02
RBM39-208ENST00000416108 SMAD4Q13485 552 aaKnown RBP8.65□□□□□ -1.02
RBM39-208ENST00000416108 DPYSQ14117 519 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 COL19A1Q14993 1142 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 PAFAH1B3Q15102 231 aaKnown RBP8.65□□□□□ -1.02
RBM39-208ENST00000416108 MPPE1Q53F39 396 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 FAM133BQ5BKY9 247 aaKnown RBP8.65□□□□□ -1.02
RBM39-208ENST00000416108 FAM78AQ5JUQ0 283 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 FAM72AQ5TYM5 149 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 MANEALQ5VSG8 457 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 NCBP2-AS2Q69YL0 99 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 SLC9A4Q6AI14 798 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 NADSYN1Q6IA69 706 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 FAM72DQ6L9T8 149 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 RFWD3Q6PCD5 774 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 Q6ZNB5 142 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 MTSS1LQ765P7 747 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 CHST9Q7L1S5 443 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 C14orf80Q86SX3 495 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 FAM72BQ86X60 149 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 CDKL3Q8IVW4 592 aaPredicted RBP8.65□□□□□ -1.02
RBM39-208ENST00000416108 BBS7Q8IWZ6 715 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 KLHL7Q8IXQ5 586 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 CCDC105Q8IYK2 499 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 PQLC3Q8N755 202 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 KIAA1958Q8N8K9 716 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 RTL3Q8N8U3 475 aaKnown RBP8.65□□□□□ -1.02
RBM39-208ENST00000416108 SMRP1Q8NCR6 262 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 SPATA4Q8NEY3 305 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 CCDC26Q8TAB7 109 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 ACTL9Q8TC94 416 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 ADAMTS19Q8TE59 1207 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 GRK7Q8WTQ7 553 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 DDI1Q8WTU0 396 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 WBP2Q969T9 261 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 TMA16Q96EY4 203 aaKnown RBP8.65□□□□□ -1.02
RBM39-208ENST00000416108 ZSWIM3Q96MP5 696 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 ASB16Q96NS5 453 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 PRMT1Q99873 361 aaKnown RBP8.65□□□□□ -1.02
RBM39-208ENST00000416108 MAGEB5Q9BZ81 275 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 POMKQ9H5K3 350 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 DUS2Q9NX74 493 aaKnown RBP8.65□□□□□ -1.02
RBM39-208ENST00000416108 FEZ2Q9UHY8 353 aaPredicted RBP8.65□□□□□ -1.02
RBM39-208ENST00000416108 CDH22Q9UJ99 828 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 FAM50BQ9Y247 325 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 CCL26Q9Y258 94 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 KIAA1549LQ6ZVL6 1849 aa8.65□□□□□ -1.02
RBM39-208ENST00000416108 MYO10Q9HD67 2058 aa8.65□□□□□ -1.03
RBM39-208ENST00000416108 IGLV3-10A0A075B6K4 115 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 TCRBV7S2A1N4TA0A589 114 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 DRGXA6NNA5 263 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 WASH4PA8MWX3 477 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 H0Y626 953 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 TRDMT1O14717 391 aaKnown RBP8.64□□□□□ -1.03
RBM39-208ENST00000416108 RIOK3O14730 519 aaKnown RBP8.64□□□□□ -1.03
RBM39-208ENST00000416108 DCLK1O15075 740 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 NCAM2O15394 837 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 MBTPS2O43462 519 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 MFSD11O43934 449 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 TBL1XO60907 577 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 CLDN11O75508 207 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 NFATC1O95644 943 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 RHOCP08134 193 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 OR1E1P30953 314 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 HOXC13P31276 330 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 ACTN2P35609 894 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 ETFBP38117 255 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 FNTAP49354 379 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 VCPP55072 806 aaKnown RBP8.64□□□□□ -1.03
RBM39-208ENST00000416108 OXCT1P55809 520 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 TUBB4BP68371 445 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 SNX1Q13596 522 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 CDH18Q13634 790 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 PDK1Q15118 436 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 NOMO1Q15155 1222 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 CCNG2Q16589 344 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 C5orf22Q49AR2 442 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 TEX35Q5T0J7 233 aa8.64□□□□□ -1.03
RBM39-208ENST00000416108 C6orf118Q5T5N4 469 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms