RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 CCR3P51677 355 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 TFDP2Q14188 446 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 PDK2Q15119 407 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 SMTNL2Q2TAL5 461 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 KRT71Q3SY84 523 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 CCDC14Q49A88 953 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 IZUMO3Q5VZ72 239 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 TANGO2Q6ICL3 276 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 FUT10Q6P4F1 479 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 GSTA5Q7RTV2 222 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 GPR65Q8IYL9 337 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 B3GALNT2Q8NCR0 500 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 OR2W6PQ8NHA6 318 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 PEBP4Q96S96 227 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 GAD1Q99259 594 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 DNMT3BQ9UBC3 853 aaKnown RBP17.72■□□□□ 0.43
PTPRC-206ENST00000413409 WASF3Q9UPY6 502 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 ZNF148Q9UQR1 794 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 TSC2P49815 1807 aa17.71■□□□□ 0.43
PTPRC-206ENST00000413409 APOC4-APOC2K7ER74 178 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 NRG2O14511 850 aaPredicted RBP17.71■□□□□ 0.42
PTPRC-206ENST00000413409 CYB561D2O14569 222 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 MDM4O15151 490 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 APOC2P02655 101 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 THP07101 528 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 SPINK2P20155 84 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 MLH1P40692 756 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 CXCL12P48061 93 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 RING1Q06587 406 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 KCTD19Q17RG1 926 aaPredicted RBP17.71■□□□□ 0.42
PTPRC-206ENST00000413409 BOLA3Q53S33 107 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 RTP2Q5QGT7 225 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 STPG1Q5TH74 334 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 HIBCHQ6NVY1 386 aaPredicted RBP17.71■□□□□ 0.42
PTPRC-206ENST00000413409 LEKR1Q6ZMV7 388 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 SH2D3CQ8N5H7 860 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 KCTD6Q8NC69 237 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 GSTCDQ8NEC7 633 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 SLC2A14Q8TDB8 520 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 PGM2Q96G03 612 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 ZFP42Q96MM3 310 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 CLSTN3Q9BQT9 956 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 PHACTR1Q9C0D0 580 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 PCSK1NQ9UHG2 260 aa17.71■□□□□ 0.42
PTPRC-206ENST00000413409 CST8O60676 142 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 GABBR2O75899 941 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 C8AP07357 584 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 PDGFRBP09619 1106 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 LMO2P25791 158 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 ADORA2BP29275 332 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 ACTN2P35609 894 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 SCNN1GP51170 649 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 SLC8A3P57103 927 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 OTUD4Q01804 1114 aaKnown RBP17.7■□□□□ 0.42
PTPRC-206ENST00000413409 PPP2R5DQ14738 602 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 TRIP13Q15645 432 aaPredicted RBP17.7■□□□□ 0.42
PTPRC-206ENST00000413409 C15orf59Q2T9L4 293 aaPredicted RBP17.7■□□□□ 0.42
PTPRC-206ENST00000413409 KCNT1Q5JUK3 1230 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 PPM1LQ5SGD2 360 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 RFX6Q8HWS3 928 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 MAP7D3Q8IWC1 876 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 ZCCHC9Q8N567 271 aaKnown RBP17.7■□□□□ 0.42
PTPRC-206ENST00000413409 ACTL9Q8TC94 416 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 FAM172AQ8WUF8 416 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 HSPH1Q92598 858 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 TLCD1Q96CP7 247 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 FAM118BQ9BPY3 351 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 COLEC11Q9BWP8 271 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 CAPS2Q9BXY5 557 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 CDC42EP4Q9H3Q1 356 aaKnown RBP17.7■□□□□ 0.42
PTPRC-206ENST00000413409 UBN1Q9NPG3 1134 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.7■□□□□ 0.42
PTPRC-206ENST00000413409 SHOC2Q9UQ13 582 aa17.7■□□□□ 0.42
PTPRC-206ENST00000413409 LAMA5O15230 3695 aa17.69■□□□□ 0.42
PTPRC-206ENST00000413409 K7ESF4 209 aa17.69■□□□□ 0.42
PTPRC-206ENST00000413409 MAN2B1O00754 1011 aa17.69■□□□□ 0.42
PTPRC-206ENST00000413409 ADAM12O43184 909 aa17.69■□□□□ 0.42
PTPRC-206ENST00000413409 HCRTO43612 131 aa17.69■□□□□ 0.42
PTPRC-206ENST00000413409 DAB1O75553 588 aa17.69■□□□□ 0.42
PTPRC-206ENST00000413409 TOP3BO95985 862 aaKnown RBP17.69■□□□□ 0.42
PTPRC-206ENST00000413409 TKTP29401 623 aaKnown RBP17.69■□□□□ 0.42
PTPRC-206ENST00000413409 LHX1P48742 406 aa17.69■□□□□ 0.42
PTPRC-206ENST00000413409 DPYSL3Q14195 570 aa17.69■□□□□ 0.42
PTPRC-206ENST00000413409 MORF4L2Q15014 288 aa17.69■□□□□ 0.42
PTPRC-206ENST00000413409 KCTD16Q68DU8 428 aa17.69■□□□□ 0.42
PTPRC-206ENST00000413409 HEATR6Q6AI08 1181 aaKnown RBP17.69■□□□□ 0.42
PTPRC-206ENST00000413409 PSAPL1Q6NUJ1 521 aa17.69■□□□□ 0.42
PTPRC-206ENST00000413409 KCTD13Q8WZ19 329 aa17.69■□□□□ 0.42
PTPRC-206ENST00000413409 CENPIQ92674 756 aaPredicted RBP17.69■□□□□ 0.42
PTPRC-206ENST00000413409 DNASE1L2Q92874 299 aa17.69■□□□□ 0.42
PTPRC-206ENST00000413409 FAF2Q96CS3 445 aa17.69■□□□□ 0.42
PTPRC-206ENST00000413409 SENP8Q96LD8 212 aa17.69■□□□□ 0.42
PTPRC-206ENST00000413409 ZNF670Q9BS34 389 aa17.69■□□□□ 0.42
PTPRC-206ENST00000413409 IER2Q9BTL4 223 aa17.69■□□□□ 0.42
PTPRC-206ENST00000413409 DUSP16Q9BY84 665 aa17.69■□□□□ 0.42
PTPRC-206ENST00000413409 ROPN1BQ9BZX4 212 aaPredicted RBP17.69■□□□□ 0.42
PTPRC-206ENST00000413409 STMN4Q9H169 189 aaPredicted RBP17.69■□□□□ 0.42
PTPRC-206ENST00000413409 ARRDC1-AS1Q9H2J1 176 aa17.69■□□□□ 0.42
PTPRC-206ENST00000413409 ROPN1Q9HAT0 212 aaPredicted RBP17.69■□□□□ 0.42
PTPRC-206ENST00000413409 C2orf42Q9NWW7 574 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms