RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 FANCMQ8IYD8 2048 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 CCDC163A0A0D9SF12 145 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 TYW5A2RUC4 315 aaKnown RBP13.58□□□□□ -0.24
SSB-203ENST00000413002 ATMINO43313 823 aaPredicted RBP13.58□□□□□ -0.24
SSB-203ENST00000413002 LUC7L3O95232 432 aaKnown RBP13.58□□□□□ -0.24
SSB-203ENST00000413002 KRT3P12035 628 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 PDGFRAP16234 1089 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 BCKDHBP21953 392 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 CNR2P34972 360 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 RFC1P35251 1148 aaPredicted RBP13.58□□□□□ -0.24
SSB-203ENST00000413002 CTSOP43234 321 aaPredicted RBP13.58□□□□□ -0.24
SSB-203ENST00000413002 KLHL30Q0D2K2 578 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 CCDC6Q16204 474 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 CCDC14Q49A88 953 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 RNF43Q68DV7 783 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 ACAD10Q6JQN1 1059 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 SND1Q7KZF4 910 aaKnown RBP eCLIP13.58□□□□□ -0.24
SSB-203ENST00000413002 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.58□□□□□ -0.24
SSB-203ENST00000413002 CACUL1Q86Y37 369 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 APCDD1Q8J025 514 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 CCAR2Q8N163 923 aaKnown RBP13.58□□□□□ -0.24
SSB-203ENST00000413002 FIBINQ8TAL6 211 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 UCMAQ8WVF2 138 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 RUBCNQ92622 972 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 LMLNQ96KR4 655 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 SELENOOQ9BVL4 669 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 MAGEB5Q9BZ81 275 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 MTG2Q9H4K7 406 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 CD248Q9HCU0 757 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 CD93Q9NPY3 652 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 ARHGEF38Q9NXL2 777 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 RRN3Q9NYV6 651 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 AIPL1Q9NZN9 384 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 ZNF292O60281 2723 aa13.58□□□□□ -0.24
SSB-203ENST00000413002 GVINP1Q7Z2Y8 2422 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 C2CD4BA6NLJ0 364 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 DDX3XO00571 662 aaKnown RBP eCLIP13.57□□□□□ -0.243e-26■■■■□ 24.4
SSB-203ENST00000413002 CNTN5O94779 1100 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 F9P00740 461 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 CALB1P05937 261 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 EPHX1P07099 455 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 PLEKP08567 350 aaPredicted RBP13.57□□□□□ -0.24
SSB-203ENST00000413002 POLR2EP19388 210 aaKnown RBP13.57□□□□□ -0.24
SSB-203ENST00000413002 NDUFV2P19404 249 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 RRM1P23921 792 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 SDC4P31431 198 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 RDXP35241 583 aaKnown RBP13.57□□□□□ -0.24
SSB-203ENST00000413002 CSKP41240 450 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 RPL7AP62424 266 aaKnown RBP13.57□□□□□ -0.24
SSB-203ENST00000413002 EIF4HQ15056 248 aaKnown RBP13.57□□□□□ -0.24
SSB-203ENST00000413002 PTPRNQ16849 979 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 FNDC3BQ53EP0 1204 aaKnown RBP13.57□□□□□ -0.24
SSB-203ENST00000413002 USP39Q53GS9 565 aaKnown RBP13.57□□□□□ -0.24
SSB-203ENST00000413002 PITRM1Q5JRX3 1037 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 DNAJC24Q6P3W2 148 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 WDR59Q6PJI9 974 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 SERPINA13PQ6UXR4 307 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 KIAA0907Q7Z7F0 614 aaPredicted RBP13.57□□□□□ -0.24
SSB-203ENST00000413002 CCDC117Q8IWD4 279 aaPredicted RBP13.57□□□□□ -0.24
SSB-203ENST00000413002 KIAA2013Q8IYS2 634 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 MCOLN2Q8IZK6 566 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 AHI1Q8N157 1196 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 DEFB119Q8N690 84 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.57□□□□□ -0.24
SSB-203ENST00000413002 OR52K2Q8NGK3 314 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 WFIKKN2Q8TEU8 576 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 PGAP3Q96FM1 320 aaPredicted RBP13.57□□□□□ -0.24
SSB-203ENST00000413002 SDK1Q7Z5N4 2213 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 MYO18AQ92614 2054 aaKnown RBP13.57□□□□□ -0.24
SSB-203ENST00000413002 OTOGLQ3ZCN5 2332 aa13.57□□□□□ -0.24
SSB-203ENST00000413002 FAM186AA6NE01 2351 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 TCRBV5S1A1TA0A578 114 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 TIMM44O43615 452 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 SRGAP2O75044 1071 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 GYPCP04921 128 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 MZF1P28698 734 aaPredicted RBP13.56□□□□□ -0.24
SSB-203ENST00000413002 PRKCIP41743 596 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 SPEM2Q0P670 501 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 PLK5Q496M5 336 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 ALFQ53S48 1182 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 TDRD12Q587J7 1177 aaKnown RBP13.56□□□□□ -0.24
SSB-203ENST00000413002 FIGNQ5HY92 759 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 BRMS1LQ5PSV4 323 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 RABGAP1LQ5R372 815 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 LAIR1Q6GTX8 287 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 KIAA1324Q6UXG2 1013 aaKnown RBP13.56□□□□□ -0.24
SSB-203ENST00000413002 BNIPLQ7Z465 357 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 C3orf20Q8ND61 904 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 DCBLD2Q96PD2 775 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 MCEEQ96PE7 176 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 NUP58Q9BVL2 599 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 IRX2Q9BZI1 471 aaPredicted RBP13.56□□□□□ -0.24
SSB-203ENST00000413002 EDEM3Q9BZQ6 932 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 MKRN2Q9H000 416 aaKnown RBP13.56□□□□□ -0.24
SSB-203ENST00000413002 DUSP15Q9H1R2 295 aaPredicted RBP13.56□□□□□ -0.24
SSB-203ENST00000413002 PARD6AQ9NPB6 346 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 MPP6Q9NZW5 540 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 GMEB2Q9UKD1 530 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 PLA2G4CQ9UP65 541 aa13.56□□□□□ -0.24
SSB-203ENST00000413002 SIGLEC16A6NMB1 481 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms