RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 KLHL11Q9NVR0 708 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 PLK2Q9NYY3 685 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 PIAS3Q9Y6X2 628 aa21.27■■□□□ 1
C4orf48-202ENST00000409860 A0A1B0GVM2 712 aa21.26■□□□□ 0.99
C4orf48-202ENST00000409860 CCDC66A2RUB6 948 aa21.26■□□□□ 0.99
C4orf48-202ENST00000409860 TCAF2A6NFQ2 919 aa21.26■□□□□ 0.99
C4orf48-202ENST00000409860 GLULP15104 373 aa21.26■□□□□ 0.99
C4orf48-202ENST00000409860 HOXD9P28356 352 aaPredicted RBP21.26■□□□□ 0.99
C4orf48-202ENST00000409860 EPHB2P29323 1055 aa21.26■□□□□ 0.99
C4orf48-202ENST00000409860 CDH4P55283 916 aa21.26■□□□□ 0.99
C4orf48-202ENST00000409860 ATP13A4Q4VNC1 1196 aa21.26■□□□□ 0.99
C4orf48-202ENST00000409860 CHST9Q7L1S5 443 aa21.26■□□□□ 0.99
C4orf48-202ENST00000409860 UBL4BQ8N7F7 174 aa21.26■□□□□ 0.99
C4orf48-202ENST00000409860 EXOC4Q96A65 974 aa21.26■□□□□ 0.99
C4orf48-202ENST00000409860 CATSPERBQ9H7T0 1116 aa21.26■□□□□ 0.99
C4orf48-202ENST00000409860 HEBP1Q9NRV9 189 aa21.26■□□□□ 0.99
C4orf48-202ENST00000409860 RCOR3Q9P2K3 495 aaPredicted RBP21.26■□□□□ 0.99
C4orf48-202ENST00000409860 FBXL21Q9UKT6 434 aa21.26■□□□□ 0.99
C4orf48-202ENST00000409860 LRRD1A4D1F6 860 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.25■□□□□ 0.99
C4orf48-202ENST00000409860 FGF10O15520 208 aaPredicted RBP21.25■□□□□ 0.99
C4orf48-202ENST00000409860 DAPK3O43293 454 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 CACNG3O60359 315 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 CLDN11O75508 207 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 LUC7L3O95232 432 aaKnown RBP21.25■□□□□ 0.99
C4orf48-202ENST00000409860 RHOQP17081 205 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 HOXC13P31276 330 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 CDH18Q13634 790 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 SLC44A4Q53GD3 710 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 C1orf228Q6PIY5 440 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 RFX8Q6ZV50 586 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 RALGPS2Q86X27 583 aaPredicted RBP21.25■□□□□ 0.99
C4orf48-202ENST00000409860 CIR1Q86X95 450 aaPredicted RBP21.25■□□□□ 0.99
C4orf48-202ENST00000409860 MFN1Q8IWA4 741 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 KATNAL2Q8IYT4 538 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 CARNMT1Q8N4J0 409 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 FAM71BQ8TC56 605 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 KRT35Q92764 455 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 CALN1Q9BXU9 219 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 RETREG1Q9H6L5 497 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 MPP6Q9NZW5 540 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 WNT16Q9UBV4 365 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 ZKSCAN5Q9Y2L8 839 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 PCDHA3Q9Y5H8 950 aa21.25■□□□□ 0.99
C4orf48-202ENST00000409860 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.24■□□□□ 0.99
C4orf48-202ENST00000409860 SPECC1L-ADORA2AF8WAN1 911 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 H0Y626 953 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 GOT1P17174 413 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 CTHP32929 405 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 EIF2DP41214 584 aaKnown RBP21.24■□□□□ 0.99
C4orf48-202ENST00000409860 SOX9P48436 509 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 HCAR3P49019 387 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 IRAK1P51617 712 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 ARSEP51690 589 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 ZNF177Q13360 481 aaPredicted RBP21.24■□□□□ 0.99
C4orf48-202ENST00000409860 MLF2Q15773 248 aaPredicted RBP21.24■□□□□ 0.99
C4orf48-202ENST00000409860 GAB4Q2WGN9 574 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 ALFQ53S48 1182 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 ZNF569Q5MCW4 686 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 RNF43Q68DV7 783 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 ETFBKMTQ8IXQ9 262 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 NAT16Q8N8M0 369 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 RAPGEF5Q92565 580 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 P2RY11Q96G91 374 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 ZNF670Q9BS34 389 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 SLC2A11Q9BYW1 496 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 ARHGEF3Q9NR81 526 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 DNAJC17Q9NVM6 304 aaKnown RBP21.24■□□□□ 0.99
C4orf48-202ENST00000409860 DONSONQ9NYP3 566 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 CWC15Q9P013 229 aaKnown RBP21.24■□□□□ 0.99
C4orf48-202ENST00000409860 NEU3Q9UQ49 428 aa21.24■□□□□ 0.99
C4orf48-202ENST00000409860 CNTN5O94779 1100 aa21.23■□□□□ 0.99
C4orf48-202ENST00000409860 KDELR1P24390 212 aa21.23■□□□□ 0.99
C4orf48-202ENST00000409860 MARCKSL1P49006 195 aa21.23■□□□□ 0.99
C4orf48-202ENST00000409860 RWDD2BP57060 319 aa21.23■□□□□ 0.99
C4orf48-202ENST00000409860 DPYSL3Q14195 570 aa21.23■□□□□ 0.99
C4orf48-202ENST00000409860 PREPLQ4J6C6 727 aaPredicted RBP21.23■□□□□ 0.99
C4orf48-202ENST00000409860 ARTNQ5T4W7 220 aa21.23■□□□□ 0.99
C4orf48-202ENST00000409860 GRAMD4Q6IC98 578 aa21.23■□□□□ 0.99
C4orf48-202ENST00000409860 TPRG1Q6ZUI0 275 aa21.23■□□□□ 0.99
C4orf48-202ENST00000409860 TFAP2DQ7Z6R9 452 aa21.23■□□□□ 0.99
C4orf48-202ENST00000409860 C12orf40Q86WS4 652 aa21.23■□□□□ 0.99
C4orf48-202ENST00000409860 VSIG1Q86XK7 387 aa21.23■□□□□ 0.99
C4orf48-202ENST00000409860 HES6Q96HZ4 224 aa21.23■□□□□ 0.99
C4orf48-202ENST00000409860 RBM41Q96IZ5 413 aaKnown RBP21.23■□□□□ 0.99
C4orf48-202ENST00000409860 CSPG4P5Q96PW8 444 aa21.23■□□□□ 0.99
C4orf48-202ENST00000409860 DEC1Q9P2X7 70 aa21.23■□□□□ 0.99
C4orf48-202ENST00000409860 CA14Q9ULX7 337 aa21.23■□□□□ 0.99
C4orf48-202ENST00000409860 PACSIN2Q9UNF0 486 aaPredicted RBP21.23■□□□□ 0.99
C4orf48-202ENST00000409860 MYO10Q9HD67 2058 aa21.23■□□□□ 0.99
C4orf48-202ENST00000409860 PI4K2BG5E9Z4 385 aa21.22■□□□□ 0.99
C4orf48-202ENST00000409860 MAN2B1O00754 1011 aa21.22■□□□□ 0.99
C4orf48-202ENST00000409860 TULP3O75386 442 aa21.22■□□□□ 0.99
C4orf48-202ENST00000409860 ZRANB2O95218 330 aaKnown RBP eCLIP21.22■□□□□ 0.99
C4orf48-202ENST00000409860 CD48P09326 243 aa21.22■□□□□ 0.99
C4orf48-202ENST00000409860 OPRD1P41143 372 aa21.22■□□□□ 0.99
C4orf48-202ENST00000409860 MAPKAPK2P49137 400 aa21.22■□□□□ 0.99
C4orf48-202ENST00000409860 DGKGP49619 791 aa21.22■□□□□ 0.99
C4orf48-202ENST00000409860 OXCT1P55809 520 aa21.22■□□□□ 0.99
C4orf48-202ENST00000409860 ZXDAP98168 799 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms