RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 CYLC2Q14093 348 aaPredicted RBP9.81□□□□□ -0.84
SMC1B-202ENST00000404354 ANKDD1AQ495B1 522 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 CCDC14Q49A88 953 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 HSP90AA5PQ58FG0 334 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 SH3D19Q5HYK7 790 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 FAM91A1Q658Y4 838 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 FAM110BQ8TC76 370 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 SCYL1Q96KG9 808 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 KCNK16Q96T55 309 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 SLC4A5Q9BY07 1137 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 SENP6Q9GZR1 1112 aaPredicted RBP9.81□□□□□ -0.84
SMC1B-202ENST00000404354 TRPV6Q9H1D0 765 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 SUDS3Q9H7L9 328 aaPredicted RBP9.81□□□□□ -0.84
SMC1B-202ENST00000404354 ZDHHC7Q9NXF8 308 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 TSPAN16Q9UKR8 245 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 ITGA11Q9UKX5 1188 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 PSMD13Q9UNM6 376 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 SNX13Q9Y5W8 968 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 CNTNAP1P78357 1384 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 RNASEH2AO75792 299 aaKnown RBP9.81□□□□□ -0.84
SMC1B-202ENST00000404354 PRKCBP05771 671 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 FAM58BPP0C7Q3 252 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 SUPT20HL2P0C7V6 817 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 CKMT2P17540 419 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 DESP17661 470 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 PIK3R1P27986 724 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 NAMPTP43490 491 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 ZNF143P52747 638 aaPredicted RBP9.81□□□□□ -0.84
SMC1B-202ENST00000404354 HMGCS2P54868 508 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 GRM2Q14416 872 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 SUPT20HL1Q3ZLR7 823 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 IL23RQ5VWK5 629 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 ACOT1Q86TX2 421 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 FAM131BQ86XD5 332 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 WDR49Q8IV35 697 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 DCLK2Q8N568 766 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 UBR7Q8N806 425 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 RNF169Q8NCN4 708 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 NSUN6Q8TEA1 469 aaKnown RBP9.81□□□□□ -0.84
SMC1B-202ENST00000404354 PPP1R13LQ8WUF5 828 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 ANKRD36BP1Q96IX9 119 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 KLHL32Q96NJ5 620 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 CIB1Q99828 191 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 CNPY3Q9BT09 278 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 ZNF518BQ9C0D4 1074 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 PTTG2Q9NZH5 202 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 DNAJB4Q9UDY4 337 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 ZNF180Q9UJW8 692 aa9.81□□□□□ -0.84
SMC1B-202ENST00000404354 PLOD2O00469 737 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 VWA5AO00534 786 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 TRDMT1O14717 391 aaKnown RBP9.8□□□□□ -0.84
SMC1B-202ENST00000404354 GLRA3O75311 464 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 CLIC3O95833 236 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 PRKCGP05129 697 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 HOXC6P09630 235 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 GPD2P43304 727 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 ENTPD1P49961 510 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 NDST1P52848 882 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 NAGLUP54802 743 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 ZNF460Q14592 562 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 TBCCQ15814 346 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 DBN1Q16643 649 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 LSM12Q3MHD2 195 aaKnown RBP9.8□□□□□ -0.84
SMC1B-202ENST00000404354 PMF1Q6P1K2 205 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 KLHL35Q6PF15 583 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 DNAAF3Q8N9W5 541 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 COLGALT1Q8NBJ5 622 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 ZNF669Q96BR6 464 aaPredicted RBP9.8□□□□□ -0.84
SMC1B-202ENST00000404354 SNX15Q9NRS6 342 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 TBC1D30Q9Y2I9 924 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 PCDHA11Q9Y5I1 949 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 ADGRA2Q96PE1 1338 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 ZNF195O14628 629 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 BIRC5O15392 142 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 MED7O43513 233 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 PDGFRBP09619 1106 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 LCP1P13796 627 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 GOT1P17174 413 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 CYP3A5P20815 502 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 SDC4P31431 198 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 L1CAMP32004 1257 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 NUMBP49757 651 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 ITGA7Q13683 1181 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 OGFRL1Q5TC84 451 aaPredicted RBP9.8□□□□□ -0.84
SMC1B-202ENST00000404354 BNC2Q6ZN30 1099 aaPredicted RBP9.8□□□□□ -0.84
SMC1B-202ENST00000404354 ARCQ7LC44 396 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 KDELC2Q7Z4H8 507 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 STRA8Q7Z7C7 330 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 KYQ8NBH2 561 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 GAB3Q8WWW8 586 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 CDKL2Q92772 493 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 SLC39A3Q9BRY0 314 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 Q9H521 79 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 COQ10BQ9H8M1 238 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 SIX4Q9UIU6 781 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 SLC39A10Q9ULF5 831 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 EFR3BQ9Y2G0 817 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 BTAF1O14981 1849 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 C2CD4BA6NLJ0 364 aa9.8□□□□□ -0.84
SMC1B-202ENST00000404354 C9JVG2 144 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms