RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 OR2T3Q8NH03 318 aa18.67■□□□□ 0.58
HDAC11-204ENST00000404040 SNX19Q92543 992 aa18.67■□□□□ 0.58
HDAC11-204ENST00000404040 BBC3Q96PG8 261 aaPredicted RBP18.67■□□□□ 0.58
HDAC11-204ENST00000404040 MARCH2Q9P0N8 246 aa18.67■□□□□ 0.58
HDAC11-204ENST00000404040 C7P10643 843 aa18.66■□□□□ 0.58
HDAC11-204ENST00000404040 CAMK2GQ13555 558 aaPredicted RBP18.66■□□□□ 0.58
HDAC11-204ENST00000404040 NR1I3Q14994 352 aa18.66■□□□□ 0.58
HDAC11-204ENST00000404040 SYCP1Q15431 976 aa18.66■□□□□ 0.58
HDAC11-204ENST00000404040 KIF19Q2TAC6 998 aa18.66■□□□□ 0.58
HDAC11-204ENST00000404040 PPP1R26Q5T8A7 1209 aaPredicted RBP18.66■□□□□ 0.58
HDAC11-204ENST00000404040 KLHDC7AQ5VTJ3 777 aa18.66■□□□□ 0.58
HDAC11-204ENST00000404040 MARCH9Q86YJ5 346 aa18.66■□□□□ 0.58
HDAC11-204ENST00000404040 ARHGEF19Q8IW93 802 aa18.66■□□□□ 0.58
HDAC11-204ENST00000404040 GALNT15Q8N3T1 639 aa18.66■□□□□ 0.58
HDAC11-204ENST00000404040 NEK11Q8NG66 645 aa18.66■□□□□ 0.58
HDAC11-204ENST00000404040 DDI1Q8WTU0 396 aa18.66■□□□□ 0.58
HDAC11-204ENST00000404040 TMEM176AQ96HP8 235 aa18.66■□□□□ 0.58
HDAC11-204ENST00000404040 LRIG1Q96JA1 1093 aa18.66■□□□□ 0.58
HDAC11-204ENST00000404040 ARID3AQ99856 593 aa18.66■□□□□ 0.58
HDAC11-204ENST00000404040 LHX5Q9H2C1 402 aa18.66■□□□□ 0.58
HDAC11-204ENST00000404040 C6orf106Q9H6K1 298 aaPredicted RBP18.66■□□□□ 0.58
HDAC11-204ENST00000404040 KIAA1257Q9ULG3 409 aa18.66■□□□□ 0.58
HDAC11-204ENST00000404040 STRIP2Q9ULQ0 834 aa18.66■□□□□ 0.58
HDAC11-204ENST00000404040 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.66■□□□□ 0.58
HDAC11-204ENST00000404040 SNX11Q9Y5W9 270 aa18.66■□□□□ 0.58
HDAC11-204ENST00000404040 ARID1BQ8NFD5 2236 aaPredicted RBP18.66■□□□□ 0.58
HDAC11-204ENST00000404040 GOLGA8CPA6NN73 597 aa18.65■□□□□ 0.58
HDAC11-204ENST00000404040 TIMM44O43615 452 aa18.65■□□□□ 0.58
HDAC11-204ENST00000404040 PAEPP09466 180 aa18.65■□□□□ 0.58
HDAC11-204ENST00000404040 HLA-EP13747 358 aa18.65■□□□□ 0.58
HDAC11-204ENST00000404040 UCHL3P15374 230 aa18.65■□□□□ 0.58
HDAC11-204ENST00000404040 HOXD9P28356 352 aaPredicted RBP18.65■□□□□ 0.58
HDAC11-204ENST00000404040 ACSL1P33121 698 aa18.65■□□□□ 0.58
HDAC11-204ENST00000404040 GRIA4P48058 902 aa18.65■□□□□ 0.58
HDAC11-204ENST00000404040 ARID5AQ03989 594 aa18.65■□□□□ 0.58
HDAC11-204ENST00000404040 CAMK2BQ13554 666 aa18.65■□□□□ 0.58
HDAC11-204ENST00000404040 SUZ12Q15022 739 aaKnown RBP18.65■□□□□ 0.58
HDAC11-204ENST00000404040 TEAD4Q15561 434 aa18.65■□□□□ 0.58
HDAC11-204ENST00000404040 PTPRNQ16849 979 aa18.65■□□□□ 0.58
HDAC11-204ENST00000404040 RSRC2Q7L4I2 434 aaKnown RBP18.65■□□□□ 0.58
HDAC11-204ENST00000404040 FMNL3Q8IVF7 1028 aa18.65■□□□□ 0.58
HDAC11-204ENST00000404040 ARHGAP18Q8N392 663 aa18.65■□□□□ 0.58
HDAC11-204ENST00000404040 IQCDQ96DY2 449 aa18.65■□□□□ 0.58
HDAC11-204ENST00000404040 SIX2Q9NPC8 291 aa18.65■□□□□ 0.58
HDAC11-204ENST00000404040 OSGEPQ9NPF4 335 aa18.65■□□□□ 0.58
HDAC11-204ENST00000404040 DNAJC12Q9UKB3 198 aa18.65■□□□□ 0.58
HDAC11-204ENST00000404040 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.65■□□□□ 0.58
HDAC11-204ENST00000404040 SIK3Q9Y2K2 1263 aa18.65■□□□□ 0.58
HDAC11-204ENST00000404040 PCDHB4Q9Y5E5 795 aa18.65■□□□□ 0.58
HDAC11-204ENST00000404040 KALRNO60229 2985 aa18.64■□□□□ 0.57
HDAC11-204ENST00000404040 SLC12A8A0AV02 714 aa18.64■□□□□ 0.57
HDAC11-204ENST00000404040 TRABD2BA6NFA1 517 aa18.64■□□□□ 0.57
HDAC11-204ENST00000404040 TNFSF14O43557 240 aa18.64■□□□□ 0.57
HDAC11-204ENST00000404040 CYP4F3Q08477 520 aa18.64■□□□□ 0.57
HDAC11-204ENST00000404040 TMEM270Q6UE05 265 aa18.64■□□□□ 0.57
HDAC11-204ENST00000404040 UBR7Q8N806 425 aa18.64■□□□□ 0.57
HDAC11-204ENST00000404040 IGSF8Q969P0 613 aa18.64■□□□□ 0.57
HDAC11-204ENST00000404040 PLD4Q96BZ4 506 aa18.64■□□□□ 0.57
HDAC11-204ENST00000404040 NAP1L5Q96NT1 182 aaPredicted RBP18.64■□□□□ 0.57
HDAC11-204ENST00000404040 TMEM245Q9H330 911 aa18.64■□□□□ 0.57
HDAC11-204ENST00000404040 TM9SF3Q9HD45 589 aa18.64■□□□□ 0.57
HDAC11-204ENST00000404040 FAM207AQ9NSI2 230 aaPredicted RBP18.64■□□□□ 0.57
HDAC11-204ENST00000404040 IFNKQ9P0W0 207 aa18.64■□□□□ 0.57
HDAC11-204ENST00000404040 CNTN6Q9UQ52 1028 aa18.64■□□□□ 0.57
HDAC11-204ENST00000404040 ANKRD6Q9Y2G4 727 aa18.64■□□□□ 0.57
HDAC11-204ENST00000404040 PCDHGA12O60330 932 aa18.63■□□□□ 0.57
HDAC11-204ENST00000404040 SEMA4FO95754 770 aa18.63■□□□□ 0.57
HDAC11-204ENST00000404040 KRT5P13647 590 aa18.63■□□□□ 0.57
HDAC11-204ENST00000404040 HLA-FP30511 346 aa18.63■□□□□ 0.57
HDAC11-204ENST00000404040 GRK6P43250 576 aa18.63■□□□□ 0.57
HDAC11-204ENST00000404040 CCT8P50990 548 aa18.63■□□□□ 0.57
HDAC11-204ENST00000404040 YWHAGP61981 247 aaKnown RBP eCLIP18.63■□□□□ 0.57
HDAC11-204ENST00000404040 STILQ15468 1287 aa18.63■□□□□ 0.57
HDAC11-204ENST00000404040 SMAD1Q15797 465 aaKnown RBP18.63■□□□□ 0.57
HDAC11-204ENST00000404040 FNDC3BQ53EP0 1204 aaKnown RBP18.63■□□□□ 0.57
HDAC11-204ENST00000404040 RAB41Q5JT25 222 aa18.63■□□□□ 0.57
HDAC11-204ENST00000404040 LAYNQ6UX15 382 aa18.63■□□□□ 0.57
HDAC11-204ENST00000404040 WFIKKN2Q8TEU8 576 aa18.63■□□□□ 0.57
HDAC11-204ENST00000404040 SHC3Q92529 594 aa18.63■□□□□ 0.57
HDAC11-204ENST00000404040 HEXIM2Q96MH2 286 aaKnown RBP18.63■□□□□ 0.57
HDAC11-204ENST00000404040 KREMEN1Q96MU8 473 aa18.63■□□□□ 0.57
HDAC11-204ENST00000404040 STK33Q9BYT3 514 aa18.63■□□□□ 0.57
HDAC11-204ENST00000404040 RBSNQ9H1K0 784 aa18.63■□□□□ 0.57
HDAC11-204ENST00000404040 FBRSQ9HAH7 460 aa18.63■□□□□ 0.57
HDAC11-204ENST00000404040 ASH1LQ9NR48 2969 aaKnown RBP18.63■□□□□ 0.57
HDAC11-204ENST00000404040 A0A087WV48 116 aa18.62■□□□□ 0.57
HDAC11-204ENST00000404040 FAM149AA5PLN7 773 aa18.62■□□□□ 0.57
HDAC11-204ENST00000404040 TEX33O43247 280 aa18.62■□□□□ 0.57
HDAC11-204ENST00000404040 VDRP11473 427 aa18.62■□□□□ 0.57
HDAC11-204ENST00000404040 RAD23BP54727 409 aa18.62■□□□□ 0.57
HDAC11-204ENST00000404040 BPIFB4P59827 614 aa18.62■□□□□ 0.57
HDAC11-204ENST00000404040 PDE4CQ08493 712 aa18.62■□□□□ 0.57
HDAC11-204ENST00000404040 RAPGEF1Q13905 1077 aa18.62■□□□□ 0.57
HDAC11-204ENST00000404040 TRIP4Q15650 581 aaPredicted RBP18.62■□□□□ 0.57
HDAC11-204ENST00000404040 ARHGAP44Q17R89 818 aa18.62■□□□□ 0.57
HDAC11-204ENST00000404040 MPPE1Q53F39 396 aa18.62■□□□□ 0.57
HDAC11-204ENST00000404040 ZNF394Q53GI3 561 aa18.62■□□□□ 0.57
HDAC11-204ENST00000404040 SARM1Q6SZW1 724 aa18.62■□□□□ 0.57
HDAC11-204ENST00000404040 PIGZQ86VD9 579 aa18.62■□□□□ 0.57
HDAC11-204ENST00000404040 SCUBE3Q8IX30 993 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms