RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 CNGB3Q9NQW8 809 aa12.83□□□□□ -0.36
PRAME-204ENST00000403441 FTSJ1Q9UET6 329 aa12.83□□□□□ -0.36
PRAME-204ENST00000403441 SUN2Q9UH99 717 aa12.83□□□□□ -0.36
PRAME-204ENST00000403441 NCKAP1Q9Y2A7 1128 aa12.83□□□□□ -0.36
PRAME-204ENST00000403441 SLCO1B1Q9Y6L6 691 aa12.83□□□□□ -0.36
PRAME-204ENST00000403441 PLXNB3Q9ULL4 1909 aa12.83□□□□□ -0.36
PRAME-204ENST00000403441 CABIN1Q9Y6J0 2220 aa12.82□□□□□ -0.36
PRAME-204ENST00000403441 NUMA1Q14980 2115 aa12.82□□□□□ -0.36
PRAME-204ENST00000403441 TBL1XO60907 577 aa12.82□□□□□ -0.36
PRAME-204ENST00000403441 RNASEH1O60930 286 aaKnown RBP12.82□□□□□ -0.36
PRAME-204ENST00000403441 FGFR1OPO95684 399 aaKnown RBP12.82□□□□□ -0.36
PRAME-204ENST00000403441 VDRP11473 427 aa12.82□□□□□ -0.36
PRAME-204ENST00000403441 TBXAS1P24557 533 aaPredicted RBP12.82□□□□□ -0.36
PRAME-204ENST00000403441 KCNH2Q12809 1159 aa12.82□□□□□ -0.36
PRAME-204ENST00000403441 SFSWAPQ12872 951 aaKnown RBP12.82□□□□□ -0.36
PRAME-204ENST00000403441 CCDC157Q569K6 752 aa12.82□□□□□ -0.36
PRAME-204ENST00000403441 MSANTD2Q6P1R3 559 aa12.82□□□□□ -0.36
PRAME-204ENST00000403441 LAYNQ6UX15 382 aa12.82□□□□□ -0.36
PRAME-204ENST00000403441 USP30Q70CQ3 517 aa12.82□□□□□ -0.36
PRAME-204ENST00000403441 KIAA0907Q7Z7F0 614 aaPredicted RBP12.82□□□□□ -0.36
PRAME-204ENST00000403441 MFN1Q8IWA4 741 aa12.82□□□□□ -0.36
PRAME-204ENST00000403441 CCDC117Q8IWD4 279 aaPredicted RBP12.82□□□□□ -0.36
PRAME-204ENST00000403441 UNC45BQ8IWX7 931 aa12.82□□□□□ -0.36
PRAME-204ENST00000403441 SCML4Q8N228 414 aa12.82□□□□□ -0.36
PRAME-204ENST00000403441 UBA3Q8TBC4 463 aa12.82□□□□□ -0.36
PRAME-204ENST00000403441 HNRNPLLQ8WVV9 542 aaKnown RBP12.82□□□□□ -0.36
PRAME-204ENST00000403441 KCTD13Q8WZ19 329 aa12.82□□□□□ -0.36
PRAME-204ENST00000403441 SKA1Q96BD8 255 aa12.82□□□□□ -0.36
PRAME-204ENST00000403441 DDX50Q9BQ39 737 aaKnown RBP12.82□□□□□ -0.36
PRAME-204ENST00000403441 RSPH9Q9H1X1 276 aaPredicted RBP12.82□□□□□ -0.36
PRAME-204ENST00000403441 KIAA1257Q9ULG3 409 aa12.82□□□□□ -0.36
PRAME-204ENST00000403441 SCML1Q9UN30 329 aa12.82□□□□□ -0.36
PRAME-204ENST00000403441 LOC400499M0QZD8 3231 aa12.82□□□□□ -0.36
PRAME-204ENST00000403441 CELSR3Q9NYQ7 3312 aa12.82□□□□□ -0.36
PRAME-204ENST00000403441 FAM47DPA6NHR8 397 aa12.81□□□□□ -0.36
PRAME-204ENST00000403441 H0Y8X5 98 aa12.81□□□□□ -0.36
PRAME-204ENST00000403441 GOLGA6L22H0YM25 854 aa12.81□□□□□ -0.36
PRAME-204ENST00000403441 O00370 1275 aa12.81□□□□□ -0.36
PRAME-204ENST00000403441 MBD3O95983 291 aa12.81□□□□□ -0.36
PRAME-204ENST00000403441 AFPP02771 609 aaKnown RBP12.81□□□□□ -0.36
PRAME-204ENST00000403441 LCP1P13796 627 aa12.81□□□□□ -0.36
PRAME-204ENST00000403441 CD70P32970 193 aa12.81□□□□□ -0.36
PRAME-204ENST00000403441 SGSHP51688 502 aa12.81□□□□□ -0.36
PRAME-204ENST00000403441 DAOAP59103 153 aa12.81□□□□□ -0.36
PRAME-204ENST00000403441 GCNT1Q02742 428 aa12.81□□□□□ -0.36
PRAME-204ENST00000403441 PIK3R6Q5UE93 754 aa12.81□□□□□ -0.36
PRAME-204ENST00000403441 KIAA0895LQ68EN5 471 aa12.81□□□□□ -0.36
PRAME-204ENST00000403441 SMYD5Q6GMV2 418 aa12.81□□□□□ -0.36
PRAME-204ENST00000403441 RFWD3Q6PCD5 774 aa12.81□□□□□ -0.36
PRAME-204ENST00000403441 HJURPQ8NCD3 748 aaPredicted RBP12.81□□□□□ -0.36
PRAME-204ENST00000403441 IRGQQ8WZA9 623 aa12.81□□□□□ -0.36
PRAME-204ENST00000403441 PABPC3Q9H361 631 aaKnown RBP12.81□□□□□ -0.36
PRAME-204ENST00000403441 THAP9Q9H5L6 903 aa12.81□□□□□ -0.36
PRAME-204ENST00000403441 GTPBP10A4D1E9 387 aaKnown RBP12.8□□□□□ -0.36
PRAME-204ENST00000403441 TRABD2BA6NFA1 517 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 KCNK3O14649 394 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 VILLO15195 856 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 IGLV3-27P01718 113 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 ASLP04424 464 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 IGHV4-34P06331 123 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 PAEPP09466 180 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 CTSKP43235 329 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 TBX4P57082 545 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 RACK1P63244 317 aaKnown RBP12.8□□□□□ -0.36
PRAME-204ENST00000403441 IL9RQ01113 521 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 CYP4F3Q08477 520 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 CDH18Q13634 790 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 SMAD1Q15797 465 aaKnown RBP12.8□□□□□ -0.36
PRAME-204ENST00000403441 LCLAT1Q6UWP7 414 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 PDCD7Q8N8D1 485 aaKnown RBP12.8□□□□□ -0.36
PRAME-204ENST00000403441 EHBP1Q8NDI1 1231 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 WFDC5Q8TCV5 224 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 LRIG1Q96JA1 1093 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 FBXL12Q9NXK8 326 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 STIM2Q9P246 746 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 DACH1Q9UI36 760 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 CNTN6Q9UQ52 1028 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.8□□□□□ -0.362e-47■□□□□ 9.6
PRAME-204ENST00000403441 TMEM131Q92545 1883 aa12.8□□□□□ -0.36
PRAME-204ENST00000403441 GOLGA4Q13439 2230 aaKnown RBP12.8□□□□□ -0.36
PRAME-204ENST00000403441 GOLGA6L7A0A1B0GV03 622 aa12.79□□□□□ -0.36
PRAME-204ENST00000403441 FAM149AA5PLN7 773 aa12.79□□□□□ -0.36
PRAME-204ENST00000403441 LRRC72A6NJI9 287 aa12.79□□□□□ -0.36
PRAME-204ENST00000403441 EIF4E1BA6NMX2 242 aaKnown RBP12.79□□□□□ -0.36
PRAME-204ENST00000403441 M0QYV0 167 aa12.79□□□□□ -0.36
PRAME-204ENST00000403441 PAPSS1O43252 624 aaPredicted RBP12.79□□□□□ -0.36
PRAME-204ENST00000403441 ACSL4O60488 711 aa12.79□□□□□ -0.36
PRAME-204ENST00000403441 FBXO21O94952 628 aa12.79□□□□□ -0.36
PRAME-204ENST00000403441 LTFP02788 710 aa12.79□□□□□ -0.36
PRAME-204ENST00000403441 ABCB4P21439 1286 aa12.79□□□□□ -0.36
PRAME-204ENST00000403441 SLC6A4P31645 630 aa12.79□□□□□ -0.36
PRAME-204ENST00000403441 HNF1BP35680 557 aa12.79□□□□□ -0.36
PRAME-204ENST00000403441 CSKP41240 450 aa12.79□□□□□ -0.36
PRAME-204ENST00000403441 RGS7P49802 495 aa12.79□□□□□ -0.36
PRAME-204ENST00000403441 LRMPQ12912 555 aa12.79□□□□□ -0.36
PRAME-204ENST00000403441 CST6Q15828 149 aa12.79□□□□□ -0.36
PRAME-204ENST00000403441 HNRNPA1L2Q32P51 320 aaKnown RBP12.79□□□□□ -0.36
PRAME-204ENST00000403441 PKDCCQ504Y2 493 aa12.79□□□□□ -0.36
PRAME-204ENST00000403441 SOWAHCQ53LP3 525 aaPredicted RBP12.79□□□□□ -0.36
PRAME-204ENST00000403441 FAM133BQ5BKY9 247 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms