RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 GALNT7Q86SF2 657 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 BRSK2Q8IWQ3 736 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 C8orf58Q8NAV2 365 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 KCNE4Q8WWG9 221 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 PIGBQ92521 554 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 LRRC39Q96DD0 335 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 GSDMCQ9BYG8 508 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 PANK2Q9BZ23 570 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 PCDHB16Q9NRJ7 776 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.78□□□□□ -1.962e-6■□□□□ 8.1
CHD9-202ENST00000398510 SPG21Q9NZD8 308 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 TRPS1Q9UHF7 1281 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 FBXO10Q9UK96 956 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 BCL9O00512 1426 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 FAM187AA6NFU0 413 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 TRAFD1O14545 582 aaPredicted RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 STX7O15400 261 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 CHST10O43529 356 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 ZBTB14O43829 449 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 TRIM3O75382 744 aaPredicted RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 NDUFA10O95299 355 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 SYPP08247 313 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 GNL1P36915 607 aaPredicted RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 THPOP40225 353 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 GPR1P46091 355 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 RAD23AP54725 363 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 YWHAZP63104 245 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 PRKCEQ02156 737 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 DHX9Q08211 1270 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 DMWDQ09019 674 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 CDH17Q12864 832 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 TMEM44Q2T9K0 475 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 LSM12Q3MHD2 195 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 ZC2HC1CQ53FD0 456 aaPredicted RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 GRAMD4Q6IC98 578 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 SLFN11Q7Z7L1 901 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 ADAMTSL2Q86TH1 951 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 SEPT1Q8WYJ6 367 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 KCNJ9Q92806 393 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 EIF2AK1Q9BQI3 630 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 OPA3Q9H6K4 179 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 NGRNQ9NPE2 291 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 COMMD8Q9NX08 183 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 B4GALT7Q9UBV7 327 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 INPP5FQ9Y2H2 1132 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 SQORQ9Y6N5 450 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 SYNJ2BP-COX16A0A087WUM0 186 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 CLDN4O14493 209 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 PLSCR1O15162 318 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 RAD51BO15315 384 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 GYG2O15488 501 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 MPZL2O60487 215 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 PALMO75781 387 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 USP1O94782 785 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 EIF2AK2P19525 551 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 FAUP35544 74 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 HSD17B3P37058 310 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 PLA2G4AP47712 749 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 SLC7A2P52569 658 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 GTF2A1P52655 376 aaPredicted RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 ARPP19P56211 112 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 NRG3P56975 720 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 POU5F1Q01860 360 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 FCHO2Q0JRZ9 810 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 DOK7Q18PE1 504 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 CTXN3Q4LDR2 81 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 PDPK2PQ6A1A2 396 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 PAOXQ6QHF9 649 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 FKBP9P1Q75LS8 142 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 TMEM132CQ8N3T6 1108 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 SNX31Q8N9S9 440 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 BTN2A2Q8WVV5 523 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 BAP1Q92560 729 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 USP6NLQ92738 828 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 ZFYVE19Q96K21 471 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 CPNE1Q99829 537 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 DPYSL5Q9BPU6 564 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 IER2Q9BTL4 223 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 TBCDQ9BTW9 1192 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 COX16Q9P0S2 106 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 DUSP12Q9UNI6 340 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 ZBTB12Q9Y330 459 aaPredicted RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 PCDHB3Q9Y5E6 796 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 PCDHGA2Q9Y5H1 932 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 GNG14A0A1W2PPG7 69 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 TNFRSF10BO14763 440 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 DNAJA2O60884 412 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 LRRN2O75325 713 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 ASMTLO95671 621 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 AGTP01019 485 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 GLI1P08151 1106 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 CTPS1P17812 591 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 ATF4P18848 351 aaPredicted RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 MAGEA9P43362 315 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 SRP54P61011 504 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 SP3Q02447 781 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 MRPL49Q13405 166 aaKnown RBP2.78□□□□□ -1.96
CHD9-202ENST00000398510 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.78□□□□□ -1.963e-6■■■□□ 17.7
CHD9-202ENST00000398510 EIPR1Q53HC9 387 aa2.78□□□□□ -1.96
CHD9-202ENST00000398510 NOL9Q5SY16 702 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms