RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 RASGEF1CQ8N431 466 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 DDHD1Q8NEL9 900 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 OR52K1Q8NGK4 314 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 PAIP1Q9H074 479 aaKnown RBP11□□□□□ -0.65
CCDC40-204ENST00000397545 ACSS2Q9NR19 701 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 ETNK2Q9NVF9 386 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 MROH7Q68CQ1 1323 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 CASTOR2A6NHX0 329 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 ACKR2O00590 384 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 LYPLA1O75608 230 aaPredicted RBP11□□□□□ -0.65
CCDC40-204ENST00000397545 SERPIND1P05546 499 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 CCDC130P13994 396 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 CHRNB3Q05901 458 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 BST2Q10589 180 aaKnown RBP11□□□□□ -0.65
CCDC40-204ENST00000397545 NEDD8Q15843 81 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 ASTE1Q2TB18 679 aaPredicted RBP11□□□□□ -0.65
CCDC40-204ENST00000397545 ZPBP2Q6X784 338 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 VSIG10LQ86VR7 867 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 JOSD2Q8TAC2 188 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 NMRAL1Q9HBL8 299 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 CYLDQ9NQC7 956 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 ARL8BQ9NVJ2 186 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 AAR2Q9Y312 384 aaKnown RBP11□□□□□ -0.65
CCDC40-204ENST00000397545 FAM32AQ9Y421 112 aaKnown RBP11□□□□□ -0.65
CCDC40-204ENST00000397545 BRWD3Q6RI45 1802 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 CCL15-CCL14A0A0B4J2E2 113 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 TCRBV9S1A1TA0A576 114 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 ZBTB24O43167 697 aaPredicted RBP11□□□□□ -0.65
CCDC40-204ENST00000397545 CLASP2O75122 1294 aaKnown RBP11□□□□□ -0.65
CCDC40-204ENST00000397545 SOAT2O75908 522 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 CCR1P32246 355 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 PNPLA4P41247 253 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 HSPA13P48723 471 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 PRKAA1Q13131 559 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 CCL15Q16663 113 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 GLB1LQ6UWU2 654 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 BNIPLQ7Z465 357 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 CLVS1Q8IUQ0 354 aaPredicted RBP11□□□□□ -0.65
CCDC40-204ENST00000397545 B4GALNT2Q8NHY0 566 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 DCUN1D1Q96GG9 259 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 KCNK4Q9NYG8 393 aa11□□□□□ -0.65
CCDC40-204ENST00000397545 HEATR9A2RTY3 570 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 SIGLEC16A6NMB1 481 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 C2CD2LO14523 706 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 BUD23O43709 281 aaKnown RBP10.99□□□□□ -0.65
CCDC40-204ENST00000397545 TMCC1O94876 653 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 TSPAN8P19075 237 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 PSMB4P28070 264 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 MMP14P50281 582 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 MARSP56192 900 aaKnown RBP10.99□□□□□ -0.65
CCDC40-204ENST00000397545 RAD51Q06609 339 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 TTC23LQ6PF05 361 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 UNC5AQ6ZN44 842 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 C11orf74Q86VG3 221 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 C12orf29Q8N999 325 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 CLPTM1LQ96KA5 538 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 OMDQ99983 421 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 ROGDIQ9GZN7 287 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 SPATC1LQ9H0A9 340 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 ACSS3Q9H6R3 686 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 PALMDQ9NP74 551 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 SLC38A7Q9NVC3 462 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 MAP3K20Q9NYL2 800 aaKnown RBP10.99□□□□□ -0.65
CCDC40-204ENST00000397545 ZNF212Q9UDV6 495 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 TRMT6Q9UJA5 497 aaKnown RBP10.99□□□□□ -0.65
CCDC40-204ENST00000397545 TSC22D4Q9Y3Q8 395 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 CNTNAP1P78357 1384 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 hCG_1818297A0A087WSY0 165 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 FAM155BO75949 473 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 LCA5LO95447 670 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 IFNA8P32881 189 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 SNX31Q8N9S9 440 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 COPS5Q92905 334 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 TBCBQ99426 244 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 UBE2OQ9C0C9 1292 aaKnown RBP10.99□□□□□ -0.65
CCDC40-204ENST00000397545 URB1O60287 2271 aaKnown RBP10.99□□□□□ -0.65
CCDC40-204ENST00000397545 EVPLLA8MZ36 301 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 PRR5-ARHGAP8B1AHC4 643 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 MRASO14807 208 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 PRPF4O43172 522 aaKnown RBP eCLIP10.99□□□□□ -0.65
CCDC40-204ENST00000397545 NFICP08651 508 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 NELFEP18615 380 aaKnown RBP10.99□□□□□ -0.65
CCDC40-204ENST00000397545 NNMTP40261 264 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 RGS4P49798 205 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 ARHGAP8P85298 464 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 CDC42EP1Q00587 391 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 EFEMP1Q12805 493 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 SNAPC2Q13487 334 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 FASTKQ14296 549 aaKnown RBP10.99□□□□□ -0.65
CCDC40-204ENST00000397545 ACAP1Q15027 740 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 BMT2Q1RMZ1 405 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 SPATA6LQ8N4H0 392 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 GSTCDQ8NEC7 633 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 LGMNQ99538 433 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 SNRNP25Q9BV90 132 aaKnown RBP10.99□□□□□ -0.65
CCDC40-204ENST00000397545 NMUR2Q9GZQ4 415 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 ACTL7BQ9Y614 415 aa10.99□□□□□ -0.65
CCDC40-204ENST00000397545 ALOX15BO15296 676 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 CLOCKO15516 846 aa10.98□□□□□ -0.65
CCDC40-204ENST00000397545 F9P00740 461 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms