RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 TDRD10Q5VZ19 366 aaKnown RBP10.53□□□□□ -0.72
COL4A4-201ENST00000396625 SHC4Q6S5L8 630 aa10.53□□□□□ -0.72
COL4A4-201ENST00000396625 DGCR14Q96DF8 476 aaKnown RBP10.53□□□□□ -0.72
COL4A4-201ENST00000396625 GPN1Q9HCN4 374 aaPredicted RBP10.53□□□□□ -0.72
COL4A4-201ENST00000396625 CROTQ9UKG9 612 aa10.53□□□□□ -0.72
COL4A4-201ENST00000396625 CDH9Q9ULB4 789 aa10.53□□□□□ -0.72
COL4A4-201ENST00000396625 MAFFQ9ULX9 164 aa10.53□□□□□ -0.72
COL4A4-201ENST00000396625 F5H5T6 163 aa10.53□□□□□ -0.72
COL4A4-201ENST00000396625 CYP2E1P05181 493 aaPredicted RBP10.53□□□□□ -0.72
COL4A4-201ENST00000396625 PDIA6Q15084 440 aa10.53□□□□□ -0.72
COL4A4-201ENST00000396625 BSDC1Q9NW68 430 aaPredicted RBP10.53□□□□□ -0.72
COL4A4-201ENST00000396625 MAP10Q9P2G4 905 aa10.53□□□□□ -0.72
COL4A4-201ENST00000396625 DHRS7Q9Y394 339 aa10.53□□□□□ -0.72
COL4A4-201ENST00000396625 ARHGEF33A8MVX0 844 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 NPR2P20594 1047 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 CACNB3P54284 484 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 NECTIN1Q15223 517 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 N4BP2L1Q5TBK1 243 aaPredicted RBP10.52□□□□□ -0.72
COL4A4-201ENST00000396625 NLGN1Q8N2Q7 840 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 SCAIQ8N9R8 606 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 CLHC1Q8NHS4 586 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 NAT9Q9BTE0 207 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 IKZF3Q9UKT9 509 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 COG5Q9UP83 839 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 GPC6Q9Y625 555 aaPredicted RBP10.52□□□□□ -0.72
COL4A4-201ENST00000396625 TDP2O95551 362 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 GYPCP04921 128 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 LYNP07948 512 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 ALOX5P09917 674 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 GPSM2P81274 684 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 TOP3AQ13472 1001 aaPredicted RBP10.52□□□□□ -0.72
COL4A4-201ENST00000396625 MGAT5BQ3V5L5 792 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 C4orf46Q504U0 113 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 PRR5LQ6MZQ0 368 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 BPIFB6Q8NFQ5 453 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 MTG1Q9BT17 334 aaPredicted RBP10.52□□□□□ -0.72
COL4A4-201ENST00000396625 INVSQ9Y283 1065 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 PCDHB7Q9Y5E2 793 aa10.52□□□□□ -0.72
COL4A4-201ENST00000396625 AFF2P51816 1311 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 OR5F1O95221 314 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 CPA3P15088 417 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 BAG6P46379 1132 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 AP1S1P61966 158 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 MPP2Q14168 576 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 CSHL1Q14406 222 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 EMC2Q15006 297 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 STK32AQ8WU08 396 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 PI4K2AQ9BTU6 479 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 OXCT2Q9BYC2 517 aaPredicted RBP10.52□□□□□ -0.73
COL4A4-201ENST00000396625 MID1IP1Q9NPA3 183 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 RBM7Q9Y580 266 aaKnown RBP10.52□□□□□ -0.73
COL4A4-201ENST00000396625 ALG6Q9Y672 507 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 ADSLP30566 484 aaPredicted RBP10.52□□□□□ -0.73
COL4A4-201ENST00000396625 NEK3P51956 506 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 RIPK1Q13546 671 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 POU5F2Q8N7G0 328 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 SYTL5Q8TDW5 730 aaPredicted RBP10.52□□□□□ -0.73
COL4A4-201ENST00000396625 STARD8Q92502 1023 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 PTPRHQ9HD43 1115 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 ENTPD4Q9Y227 616 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 GCLCP48506 637 aaPredicted RBP10.52□□□□□ -0.73
COL4A4-201ENST00000396625 SLC11A2P49281 568 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 ALDH3A2P51648 485 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 COPZ1P61923 177 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 MYBPC1Q00872 1141 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 DENND5AQ6IQ26 1287 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 BHLHB9Q6PI77 547 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 ZNF621Q6ZSS3 439 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 SYN2Q92777 582 aaPredicted RBP10.52□□□□□ -0.73
COL4A4-201ENST00000396625 PHF21BQ96EK2 531 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 MROH7-TTC4A0A0A0MT08 1334 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 OR14I1A6ND48 311 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 RGS10O43665 173 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 NOS1APO75052 506 aaPredicted RBP10.52□□□□□ -0.73
COL4A4-201ENST00000396625 DBTP11182 482 aaKnown RBP10.52□□□□□ -0.73
COL4A4-201ENST00000396625 IRGCQ6NXR0 463 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 ZNF613Q6PF04 617 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 FOXP4Q8IVH2 680 aaPredicted RBP10.52□□□□□ -0.73
COL4A4-201ENST00000396625 OR8H3Q8N146 312 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 KLHL23Q8NBE8 558 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 MAGEE2Q8TD90 523 aaPredicted RBP10.52□□□□□ -0.73
COL4A4-201ENST00000396625 DLG3Q92796 817 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 CHCHD6Q9BRQ6 235 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 PIH1D3Q9NQM4 214 aaKnown RBP10.52□□□□□ -0.73
COL4A4-201ENST00000396625 AP4E1Q9UPM8 1137 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 ADCY10Q96PN6 1610 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 SLC26A4O43511 780 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 PDK2Q15119 407 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 ZNF554Q86TJ5 538 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 ZNF655Q8N720 491 aaPredicted RBP10.52□□□□□ -0.73
COL4A4-201ENST00000396625 ATP6V0D2Q8N8Y2 350 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 ANKS1AQ92625 1134 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 C7orf25Q9BPX7 421 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 OSBPL11Q9BXB4 747 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 NIF3L1Q9GZT8 377 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 LRRC40Q9H9A6 602 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 NEK6Q9HC98 313 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 XPR1Q9UBH6 696 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 ZNF521Q96K83 1311 aa10.52□□□□□ -0.73
COL4A4-201ENST00000396625 DGAT1O75907 488 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms